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|def="A skeletal muscle of the trunk." []
|def="A skeletal muscle of the trunk." []
|xref=SCTID:244848007
|xref=SCTID:244848007
|is_a=UBERON:0003897
|is_a=UBERON:0001134
|synonym="skeletal muscle of torso" EXACT [OBOL:automatic];;"skeletal muscle tissue of torso" EXACT [OBOL:automatic];;"skeletal muscle tissue of trunk" EXACT [OBOL:automatic];;"torso skeletal muscle" EXACT [OBOL:automatic];;"torso skeletal muscle tissue" EXACT [OBOL:automatic];;"trunk skeletal muscle" EXACT [OBOL:automatic];;"trunk skeletal muscle tissue" EXACT [OBOL:automatic]
|synonym="skeletal muscle of torso" EXACT [OBOL:automatic];;"skeletal muscle tissue of torso" EXACT [OBOL:automatic];;"skeletal muscle tissue of trunk" EXACT [OBOL:automatic];;"torso skeletal muscle" EXACT [OBOL:automatic];;"torso skeletal muscle tissue" EXACT [OBOL:automatic];;"trunk skeletal muscle" EXACT [OBOL:automatic];;"trunk skeletal muscle tissue" EXACT [OBOL:automatic]
|comment=
|comment=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0002100
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:04, 26 June 2012

Name:skeletal muscle of trunk
Definition:"A skeletal muscle of the trunk." []
Xrefs:
links:
SCTID:244848007
Synonyms: "skeletal muscle of torso" EXACT [OBOL:automatic]
"skeletal muscle tissue of torso" EXACT [OBOL:automatic]
"skeletal muscle tissue of trunk" EXACT [OBOL:automatic]
"torso skeletal muscle" EXACT [OBOL:automatic]
"torso skeletal muscle tissue" EXACT [OBOL:automatic]
"trunk skeletal muscle" EXACT [OBOL:automatic]
"trunk skeletal muscle tissue" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001134(skeletal muscle tissue)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003898 (skeletal muscle of trunk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr18:10458574..10458579,-#_12a1919bd062d83ae89619d0578976e8p@chr18:10458574..10458579, -
5.42e-195FFCP PHASE1:Hg19::chr18:10458574..10458579,-#_12a1919bd062d83ae89619d0578976e8p@chr18:10458574..10458579, -
2.55e-98FFCP PHASE1:Hg19::chr17:39388700..39388702,+#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP9-3, p1@KRTAP9-9
2.55e-98FFCP PHASE1:Hg19::chr3:112929906..112929910,+#_f1f431959f7a4ff7889fe561406aa3dap13@BOC
2.55e-98FFCP PHASE2:Hg19::chr17:39394250..39394253,+#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP9-8
2.55e-98FFCP PHASE2:Hg19::chr17:10428881..10428898,+#_f1f431959f7a4ff7889fe561406aa3dap@chr17:10428881..10428898, +
2.55e-98FFCP PHASE2:Hg19::chr1:223065647..223065654,+#_f1f431959f7a4ff7889fe561406aa3dap@chr1:223065647..223065654, +
2.55e-98FFCP PHASE2:Hg19::chr17:39306068..39306077,-#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP4-5
2.55e-98FFCP PHASE1:Hg19::chr17:39394250..39394253,+#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP9-8
2.55e-98FFCP PHASE2:Hg19::chr11:64518023..64518030,-#_f1f431959f7a4ff7889fe561406aa3dap19@PYGM
2.55e-98FFCP PHASE1:Hg19::chr17:10428881..10428898,+#_f1f431959f7a4ff7889fe561406aa3dap@chr17:10428881..10428898, +
2.55e-98FFCP PHASE1:Hg19::chr17:39306068..39306077,-#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP4-5
2.55e-98FFCP PHASE2:Hg19::chr20:31571662..31571664,+#_f1f431959f7a4ff7889fe561406aa3dap@chr20:31571662..31571664, +
2.55e-98FFCP PHASE2:Hg19::chr1:223065664..223065673,+#_f1f431959f7a4ff7889fe561406aa3dap@chr1:223065664..223065673, +
2.55e-98FFCP PHASE2:Hg19::chr17:39324471..39324474,-#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP4-3
2.55e-98FFCP PHASE1:Hg19::chr8:115584851..115584862,+#_f1f431959f7a4ff7889fe561406aa3dap@chr8:115584851..115584862, +
2.55e-98FFCP PHASE2:Hg19::chr3:112929906..112929910,+#_f1f431959f7a4ff7889fe561406aa3dap13@BOC
2.55e-98FFCP PHASE2:Hg19::chr8:115584851..115584862,+#_f1f431959f7a4ff7889fe561406aa3dap@chr8:115584851..115584862, +
2.55e-98FFCP PHASE1:Hg19::chr17:39324471..39324474,-#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP4-3
2.55e-98FFCP PHASE2:Hg19::chr17:39334471..39334474,-#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP4-2
2.55e-98FFCP PHASE1:Hg19::chr1:223065647..223065654,+#_f1f431959f7a4ff7889fe561406aa3dap@chr1:223065647..223065654, +
2.55e-98FFCP PHASE1:Hg19::chr11:64518023..64518030,-#_f1f431959f7a4ff7889fe561406aa3dap19@PYGM
2.55e-98FFCP PHASE1:Hg19::chr17:39334471..39334474,-#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP4-2
2.55e-98FFCP PHASE2:Hg19::chr9:101832711..101832718,+#_f1f431959f7a4ff7889fe561406aa3dap@chr9:101832711..101832718, +
2.55e-98FFCP PHASE2:Hg19::chr17:39388700..39388702,+#_f1f431959f7a4ff7889fe561406aa3dap1@KRTAP9-3, p1@KRTAP9-9
2.55e-98FFCP PHASE1:Hg19::chr9:101832711..101832718,+#_f1f431959f7a4ff7889fe561406aa3dap@chr9:101832711..101832718, +
2.55e-98FFCP PHASE1:Hg19::chr1:223065664..223065673,+#_f1f431959f7a4ff7889fe561406aa3dap@chr1:223065664..223065673, +
2.55e-98FFCP PHASE1:Hg19::chr20:31571662..31571664,+#_f1f431959f7a4ff7889fe561406aa3dap@chr20:31571662..31571664, +
1.23e-66FFCP PHASE1:Hg19::chr12:102075405..102075407,+#_41a61acea284a5cb41fd9916ae9340eep@chr12:102075405..102075407, +
1.23e-66FFCP PHASE1:Hg19::chr11:126077478..126077485,-#_41a61acea284a5cb41fd9916ae9340eep4@RPUSD4
1.23e-66FFCP PHASE2:Hg19::chr12:102075405..102075407,+#_41a61acea284a5cb41fd9916ae9340eep@chr12:102075405..102075407, +
1.23e-66FFCP PHASE1:Hg19::chr19:50994855..50994864,-#_41a61acea284a5cb41fd9916ae9340eep@chr19:50994855..50994864, -
1.23e-66FFCP PHASE2:Hg19::chr11:126077478..126077485,-#_41a61acea284a5cb41fd9916ae9340eep4@RPUSD4
1.23e-66FFCP PHASE1:Hg19::chr10:75226166..75226169,-#_41a61acea284a5cb41fd9916ae9340eep6@PPP3CB
1.23e-66FFCP PHASE2:Hg19::chr19:50994855..50994864,-#_41a61acea284a5cb41fd9916ae9340eep@chr19:50994855..50994864, -
1.23e-66FFCP PHASE2:Hg19::chr10:75226166..75226169,-#_41a61acea284a5cb41fd9916ae9340eep6@PPP3CB
2.39e-66FFCP PHASE1:Hg19::chr2:179542420..179542428,-#_ae72f811d28b737074b31cd774109d8dp@chr2:179542420..179542428, -
2.39e-66FFCP PHASE1:Hg19::chr5:7727283..7727284,+#_ae72f811d28b737074b31cd774109d8dp19@ADCY2
2.39e-66FFCP PHASE2:Hg19::chr15:99548796..99548805,-#_ae72f811d28b737074b31cd774109d8dp3@PGPEP1L
2.39e-66FFCP PHASE2:Hg19::chr12:68185216..68185218,+#_ae72f811d28b737074b31cd774109d8dp@chr12:68185216..68185218, +
2.39e-66FFCP PHASE1:Hg19::chr17:10533450..10533457,+#_ae72f811d28b737074b31cd774109d8dp@chr17:10533450..10533457, +
2.39e-66FFCP PHASE2:Hg19::chr2:179588230..179588237,-#_ae72f811d28b737074b31cd774109d8dp@chr2:179588230..179588237, -
2.39e-66FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_ae72f811d28b737074b31cd774109d8dp47@RBPJ
2.39e-66FFCP PHASE1:Hg19::chr19:50997736..50997745,-#_ae72f811d28b737074b31cd774109d8dp@chr19:50997736..50997745, -
2.39e-66FFCP PHASE1:Hg19::chr14:97684658..97684662,+#_ae72f811d28b737074b31cd774109d8dp@chr14:97684658..97684662, +
2.39e-66FFCP PHASE1:Hg19::chr11:1955193..1955200,+#_ae72f811d28b737074b31cd774109d8dp23@TNNT3
2.39e-66FFCP PHASE2:Hg19::chr7:123241760..123241766,-#_ae72f811d28b737074b31cd774109d8dp@chr7:123241760..123241766, -
2.39e-66FFCP PHASE1:Hg19::chr7:123241760..123241766,-#_ae72f811d28b737074b31cd774109d8dp@chr7:123241760..123241766, -
2.39e-66FFCP PHASE2:Hg19::chr2:179548750..179548755,-#_ae72f811d28b737074b31cd774109d8dp@chr2:179548750..179548755, -
2.39e-66FFCP PHASE1:Hg19::chr2:26700872..26700884,-#_ae72f811d28b737074b31cd774109d8dp5@OTOF
2.39e-66FFCP PHASE1:Hg19::chr10:99343436..99343448,+#_ae72f811d28b737074b31cd774109d8dp@chr10:99343436..99343448, +
2.39e-66FFCP PHASE2:Hg19::chr14:97684658..97684662,+#_ae72f811d28b737074b31cd774109d8dp@chr14:97684658..97684662, +
2.39e-66FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_ae72f811d28b737074b31cd774109d8dp47@RBPJ
2.39e-66FFCP PHASE2:Hg19::chr2:179542420..179542428,-#_ae72f811d28b737074b31cd774109d8dp@chr2:179542420..179542428, -
2.39e-66FFCP PHASE2:Hg19::chr5:7727283..7727284,+#_ae72f811d28b737074b31cd774109d8dp19@ADCY2
2.39e-66FFCP PHASE1:Hg19::chr10:24407264..24407270,-#_ae72f811d28b737074b31cd774109d8dp@chr10:24407264..24407270, -
2.39e-66FFCP PHASE2:Hg19::chr10:99343436..99343448,+#_ae72f811d28b737074b31cd774109d8dp@chr10:99343436..99343448, +
2.39e-66FFCP PHASE2:Hg19::chr19:50997736..50997745,-#_ae72f811d28b737074b31cd774109d8dp@chr19:50997736..50997745, -
2.39e-66FFCP PHASE1:Hg19::chr15:99548796..99548805,-#_ae72f811d28b737074b31cd774109d8dp3@PGPEP1L
2.39e-66FFCP PHASE1:Hg19::chr2:179588230..179588237,-#_ae72f811d28b737074b31cd774109d8dp@chr2:179588230..179588237, -
2.39e-66FFCP PHASE1:Hg19::chr12:68185216..68185218,+#_ae72f811d28b737074b31cd774109d8dp@chr12:68185216..68185218, +
2.39e-66FFCP PHASE2:Hg19::chr10:24407264..24407270,-#_ae72f811d28b737074b31cd774109d8dp@chr10:24407264..24407270, -
2.39e-66FFCP PHASE2:Hg19::chr11:1955193..1955200,+#_ae72f811d28b737074b31cd774109d8dp23@TNNT3
2.39e-66FFCP PHASE1:Hg19::chr2:179548750..179548755,-#_ae72f811d28b737074b31cd774109d8dp@chr2:179548750..179548755, -
2.39e-66FFCP PHASE2:Hg19::chr2:26700872..26700884,-#_ae72f811d28b737074b31cd774109d8dp5@OTOF
2.39e-66FFCP PHASE2:Hg19::chr17:10533450..10533457,+#_ae72f811d28b737074b31cd774109d8dp@chr17:10533450..10533457, +
4.66e-66FFCP PHASE2:Hg19::chr13:28961100..28961122,-#_2ae58ba153e5390a115185b39f431929p14@FLT1
4.66e-66FFCP PHASE2:Hg19::chr17:10544511..10544520,-#_2ae58ba153e5390a115185b39f431929p@chr17:10544511..10544520, -
4.66e-66FFCP PHASE2:Hg19::chr8:82373809..82373815,-#_2ae58ba153e5390a115185b39f431929p1@FABP9
4.66e-66FFCP PHASE1:Hg19::chr2:152419209..152419216,-#_2ae58ba153e5390a115185b39f431929p@chr2:152419209..152419216, -
4.66e-66FFCP PHASE2:Hg19::chr2:152393686..152393693,-#_2ae58ba153e5390a115185b39f431929p@chr2:152393686..152393693, -
4.66e-66FFCP PHASE1:Hg19::chr8:82373809..82373815,-#_2ae58ba153e5390a115185b39f431929p1@FABP9
4.66e-66FFCP PHASE1:Hg19::chr17:10544511..10544520,-#_2ae58ba153e5390a115185b39f431929p@chr17:10544511..10544520, -
4.66e-66FFCP PHASE2:Hg19::chr2:152476098..152476105,-#_2ae58ba153e5390a115185b39f431929p@chr2:152476098..152476105, -
4.66e-66FFCP PHASE1:Hg19::chr2:168106984..168106993,+#_2ae58ba153e5390a115185b39f431929p34@XIRP2
4.66e-66FFCP PHASE2:Hg19::chr17:39507076..39507080,-#_2ae58ba153e5390a115185b39f431929p1@KRT33A
4.66e-66FFCP PHASE1:Hg19::chr2:168105377..168105386,+#_2ae58ba153e5390a115185b39f431929p28@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr2:152342364..152342373,-#_2ae58ba153e5390a115185b39f431929p@chr2:152342364..152342373, -
4.66e-66FFCP PHASE2:Hg19::chr2:152514527..152514536,-#_2ae58ba153e5390a115185b39f431929p@chr2:152514527..152514536, -
4.66e-66FFCP PHASE1:Hg19::chr17:39507076..39507080,-#_2ae58ba153e5390a115185b39f431929p1@KRT33A
4.66e-66FFCP PHASE2:Hg19::chr17:38911580..38911584,-#_2ae58ba153e5390a115185b39f431929p1@KRT25
4.66e-66FFCP PHASE1:Hg19::chr12:52695617..52695623,+#_2ae58ba153e5390a115185b39f431929p4@KRT86
4.66e-66FFCP PHASE1:Hg19::chr17:38911580..38911584,-#_2ae58ba153e5390a115185b39f431929p1@KRT25
4.66e-66FFCP PHASE2:Hg19::chr17:38938796..38938803,-#_2ae58ba153e5390a115185b39f431929p1@KRT27
4.66e-66FFCP PHASE2:Hg19::chr2:152419209..152419216,-#_2ae58ba153e5390a115185b39f431929p@chr2:152419209..152419216, -
4.66e-66FFCP PHASE1:Hg19::chr2:152393686..152393693,-#_2ae58ba153e5390a115185b39f431929p@chr2:152393686..152393693, -
4.66e-66FFCP PHASE1:Hg19::chr2:152476098..152476105,-#_2ae58ba153e5390a115185b39f431929p@chr2:152476098..152476105, -
4.66e-66FFCP PHASE1:Hg19::chr13:28961100..28961122,-#_2ae58ba153e5390a115185b39f431929p14@FLT1
4.66e-66FFCP PHASE2:Hg19::chr2:168106984..168106993,+#_2ae58ba153e5390a115185b39f431929p34@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr17:38938796..38938803,-#_2ae58ba153e5390a115185b39f431929p1@KRT27
4.66e-66FFCP PHASE2:Hg19::chr2:168105377..168105386,+#_2ae58ba153e5390a115185b39f431929p28@XIRP2
4.66e-66FFCP PHASE2:Hg19::chr2:152342364..152342373,-#_2ae58ba153e5390a115185b39f431929p@chr2:152342364..152342373, -
4.66e-66FFCP PHASE1:Hg19::chr2:152514527..152514536,-#_2ae58ba153e5390a115185b39f431929p@chr2:152514527..152514536, -
4.66e-66FFCP PHASE2:Hg19::chr12:52695617..52695623,+#_2ae58ba153e5390a115185b39f431929p4@KRT86
1.46e-50FFCP PHASE2:Hg19::chr11:94476841..94476846,+#_6cbe82fce8f27f61d7827df898391f17p@chr11:94476841..94476846, +
1.46e-50FFCP PHASE1:Hg19::chr15:99548808..99548813,-#_6cbe82fce8f27f61d7827df898391f17p6@PGPEP1L
1.46e-50FFCP PHASE1:Hg19::chrX:21672387..21672391,-#_6cbe82fce8f27f61d7827df898391f17p@chrX:21672387..21672391, -
1.46e-50FFCP PHASE2:Hg19::chrX:21672387..21672391,-#_6cbe82fce8f27f61d7827df898391f17p@chrX:21672387..21672391, -
1.46e-50FFCP PHASE2:Hg19::chr15:99548808..99548813,-#_6cbe82fce8f27f61d7827df898391f17p6@PGPEP1L
1.46e-50FFCP PHASE1:Hg19::chr1:236861252..236861256,+#_6cbe82fce8f27f61d7827df898391f17p@chr1:236861252..236861256, +

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