CL:0000040: Difference between revisions
From FANTOM5_SSTAR
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|id=CL:0000040 | |id=CL:0000040 | ||
|name=monoblast | |name=monoblast | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A myeloid progenitor cell committed to the monocyte lineage. This cell is CD11b-positive, has basophilic cytoplasm, euchromatin, and the presence of a nucleolus." [GOC:add, http://www.clt.astate.edu/wwilliam/, http://www.copewithcytokines.de, PMID:1104740] | |def="A myeloid progenitor cell committed to the monocyte lineage. This cell is CD11b-positive, has basophilic cytoplasm, euchromatin, and the presence of a nucleolus." [GOC:add, http://www.clt.astate.edu/wwilliam/, http://www.copewithcytokines.de, PMID:1104740] | ||
|xref=FMA:83553 | |xref=FMA:83553 | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:24, 26 June 2012
| Name: | monoblast | ||
|---|---|---|---|
| Namespace: | cell;;efo | ||
| Definition: | "A myeloid progenitor cell committed to the monocyte lineage. This cell is CD11b-positive, has basophilic cytoplasm, euchromatin, and the presence of a nucleolus." [GOC:add, http://www.clt.astate.edu/wwilliam/, http://www.copewithcytokines.de, PMID:1104740] | ||
| Xrefs: |
| ||
| Synonyms: |
"CFU-M" RELATED [] "colony forming unit macrophage" RELATED [] "monocyte stem cell" RELATED [] | ||
| Comments: | Morphology: mononuclear cell, diameter 12-20 _M, non-granular, N/C ratio 3/1 - 4/1; markers: CD11b (shared with many other myeloid cells); location: Adult: bone marrow; fetal: liver, Yolk Sac; role or process: hematopoiesis, monocyte development; lineage: hematopoietic, myeloid. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002194(monopoietic cell) |
|---|
Children
| develops from: | CL:0000559 (promonocyte) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000040 (monoblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.04e-147 | FFCP PHASE2:Hg19::chr7:77050554..77050601,+#_102b57f152dc3cb6d15cb4ae40e46f39 | p@chr7:77050554..77050601, + |
| 1.04e-147 | FFCP PHASE1:Hg19::chr7:77050554..77050601,+#_102b57f152dc3cb6d15cb4ae40e46f39 | p@chr7:77050554..77050601, + |
| 5.64e-145 | FFCP PHASE2:Hg19::chr19:18288651..18288682,+#_59bd3fe86fc67b7fe468dc7f0f2ea18b | p5@IFI30 |
| 5.64e-145 | FFCP PHASE1:Hg19::chr19:18288651..18288682,+#_59bd3fe86fc67b7fe468dc7f0f2ea18b | p5@IFI30 |
| 4.95e-140 | FFCP PHASE2:Hg19::chr19:18288828..18288861,+#_a36944be3e8bea1bbd3ec01b471937f1 | p7@IFI30 |
| 4.95e-140 | FFCP PHASE1:Hg19::chr19:18288828..18288861,+#_a36944be3e8bea1bbd3ec01b471937f1 | p7@IFI30 |
| 5.06e-140 | FFCP PHASE2:Hg19::chr5:180242646..180242657,-#_c41c7f4ffb4814a16b0b6ed50627e88c | p15@MGAT1 |
| 5.06e-140 | FFCP PHASE1:Hg19::chr5:180242646..180242657,-#_c41c7f4ffb4814a16b0b6ed50627e88c | p15@MGAT1 |
| 1.31e-139 | FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_a3a922caa6095f88eb74a493ef12823a | p@chr1:161188661..161188679, + |
| 1.31e-139 | FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_a3a922caa6095f88eb74a493ef12823a | p@chr1:161188661..161188679, + |
| 5.87e-136 | FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_90a3154d215d0c3cc62fd2684293389b | p1@CYP1B1-AS1 |
| 5.87e-136 | FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_90a3154d215d0c3cc62fd2684293389b | p1@CYP1B1-AS1 |
| 5.37e-135 | FFCP PHASE1:Hg19::chr4:185314125..185314143,-#_21deb975ec0691e25c3617bd83fb8b24 | p@chr4:185314125..185314143, - |
| 5.37e-135 | FFCP PHASE2:Hg19::chr4:185314125..185314143,-#_21deb975ec0691e25c3617bd83fb8b24 | p@chr4:185314125..185314143, - |
| 3.75e-134 | FFCP PHASE1:Hg19::chr3:149531627..149531651,+#_3d811ecdbf5fc895479264b703fe4ed1 | p7@RNF13 |
| 3.75e-134 | FFCP PHASE2:Hg19::chr3:149531627..149531651,+#_3d811ecdbf5fc895479264b703fe4ed1 | p7@RNF13 |
| 6.15e-134 | FFCP PHASE2:Hg19::chr2:119726719..119726744,+#_70b2dfb839229699dce935e6cb163dee | p@chr2:119726719..119726744, + |
| 6.15e-134 | FFCP PHASE1:Hg19::chr2:119726719..119726744,+#_70b2dfb839229699dce935e6cb163dee | p@chr2:119726719..119726744, + |
| 7.41e-134 | FFCP PHASE2:Hg19::chr1:161187824..161187847,+#_4741dea864e2b4e65bc8361187188027 | p@chr1:161187824..161187847, + |
| 7.41e-134 | FFCP PHASE1:Hg19::chr1:161187824..161187847,+#_4741dea864e2b4e65bc8361187188027 | p@chr1:161187824..161187847, + |
| 2.24e-133 | FFCP PHASE2:Hg19::chr17:7482481..7482508,-#_a6e11dd5969514a7fb8ba63d1e778baf | p@chr17:7482481..7482508, - |
| 2.24e-133 | FFCP PHASE1:Hg19::chr17:7482481..7482508,-#_a6e11dd5969514a7fb8ba63d1e778baf | p@chr17:7482481..7482508, - |
| 4.55e-133 | FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_194f003e09b739ceadd46454ed778ff9 | p@chr19:18286116..18286156, + |
| 4.55e-133 | FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_194f003e09b739ceadd46454ed778ff9 | p@chr19:18286116..18286156, + |
| 1.09e-132 | FFCP PHASE1:Hg19::chr4:185314151..185314178,-#_f977e0db84003918acae04c7d5842a5e | p@chr4:185314151..185314178, - |
| 1.09e-132 | FFCP PHASE2:Hg19::chr4:185314151..185314178,-#_f977e0db84003918acae04c7d5842a5e | p@chr4:185314151..185314178, - |
| 1.13e-132 | FFCP PHASE2:Hg19::chr5:131280548..131280574,-#_06b163e292541b15a2f3beded661dc6a | p1@ENST00000425320 |
| 1.13e-132 | FFCP PHASE1:Hg19::chr5:131280548..131280574,-#_06b163e292541b15a2f3beded661dc6a | p1@ENST00000425320 |
| 1.42e-132 | FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_afcb2fb18336b8be21837e27df17d9e7 | p@chr2:145429606..145429658, + |
| 1.42e-132 | FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_afcb2fb18336b8be21837e27df17d9e7 | p@chr2:145429606..145429658, + |
| 1.21e-131 | FFCP PHASE2:Hg19::chr19:18288064..18288080,+#_b3ff82b3177da763bb4ab0017397fbf0 | p@chr19:18288064..18288080, + |
| 1.21e-131 | FFCP PHASE1:Hg19::chr19:18288064..18288080,+#_b3ff82b3177da763bb4ab0017397fbf0 | p@chr19:18288064..18288080, + |
| 2.27e-131 | FFCP PHASE1:Hg19::chr1:150724282..150724308,-#_40d6f9d99dd17d795ce3dc2f76252548 | p8@CTSS |
| 2.27e-131 | FFCP PHASE2:Hg19::chr1:150724282..150724308,-#_40d6f9d99dd17d795ce3dc2f76252548 | p8@CTSS |
| 2.82e-131 | FFCP PHASE2:Hg19::chrX:37664331..37664352,+#_2b3290d3e2048a9df7b6cb55975115ea | p@chrX:37664331..37664352, + |
| 2.82e-131 | FFCP PHASE1:Hg19::chrX:37664331..37664352,+#_2b3290d3e2048a9df7b6cb55975115ea | p@chrX:37664331..37664352, + |
| 4.07e-131 | FFCP PHASE2:Hg19::chr4:185314188..185314207,-#_f7c54edfc067c8cf57396cb5afb1977f | p@chr4:185314188..185314207, - |
| 4.07e-131 | FFCP PHASE1:Hg19::chr4:185314188..185314207,-#_f7c54edfc067c8cf57396cb5afb1977f | p@chr4:185314188..185314207, - |
| 5.24e-131 | FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_c178ca20fec073d75a806659bb85789c | p@chr15:65174546..65174583, - |
| 5.24e-131 | FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_c178ca20fec073d75a806659bb85789c | p@chr15:65174546..65174583, - |
| 2.76e-130 | FFCP PHASE1:Hg19::chr4:159727272..159727307,+#_82adf8437c6556a8cd826df68e568934 | p7@FNIP2 |
| 2.76e-130 | FFCP PHASE2:Hg19::chr4:159727272..159727307,+#_82adf8437c6556a8cd826df68e568934 | p7@FNIP2 |
| 3.58e-130 | FFCP PHASE1:Hg19::chr1:161188746..161188758,+#_b66d4803be6314df7a3352a112eeff33 | p@chr1:161188746..161188758, + |
| 3.58e-130 | FFCP PHASE2:Hg19::chr1:161188746..161188758,+#_b66d4803be6314df7a3352a112eeff33 | p@chr1:161188746..161188758, + |
| 2.17e-129 | FFCP PHASE2:Hg19::chr20:1517991..1518011,-#_e3c25d87f2c558739a6a5d3f2efa0522 | p@chr20:1517991..1518011, - |
| 2.17e-129 | FFCP PHASE1:Hg19::chr20:1517991..1518011,-#_e3c25d87f2c558739a6a5d3f2efa0522 | p@chr20:1517991..1518011, - |
| 3.46e-129 | FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_b438bf2c1b2b4b03dcab5f297d8cf515 | p7@EMILIN2 |
| 3.46e-129 | FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_b438bf2c1b2b4b03dcab5f297d8cf515 | p7@EMILIN2 |
| 1.47e-128 | FFCP PHASE1:Hg19::chr19:18288514..18288554,+#_60b688a8880e20917480e69e4203049b | p6@IFI30 |
| 1.47e-128 | FFCP PHASE2:Hg19::chr19:18288514..18288554,+#_60b688a8880e20917480e69e4203049b | p6@IFI30 |
| 1.78e-128 | FFCP PHASE1:Hg19::chr19:18288914..18288931,-#_d5ef1b1ee934e4194ca8716b48979a9f | p5@CU676849, p5@CU689079 |
| 1.78e-128 | FFCP PHASE2:Hg19::chr19:18288914..18288931,-#_d5ef1b1ee934e4194ca8716b48979a9f | p5@CU676849, p5@CU689079 |
| 2.01e-128 | FFCP PHASE1:Hg19::chr5:180242576..180242585,-#_730634d1674e108b07f6a2eb6edfc442 | p12@MGAT1 |
| 2.01e-128 | FFCP PHASE2:Hg19::chr5:180242576..180242585,-#_730634d1674e108b07f6a2eb6edfc442 | p12@MGAT1 |
| 2.32e-127 | FFCP PHASE2:Hg19::chr17:40168698..40168726,-#_abfeb65177e726fd323583a223585b2c | p1@AK126179 |
| 2.32e-127 | FFCP PHASE1:Hg19::chr17:40168698..40168726,-#_abfeb65177e726fd323583a223585b2c | p1@AK126179 |
| 2.49e-127 | FFCP PHASE2:Hg19::chr17:7483714..7483726,+#_e0d88c96369c96b1e5d91962e639251f | p@chr17:7483714..7483726, + |
| 2.49e-127 | FFCP PHASE1:Hg19::chr17:7483714..7483726,+#_e0d88c96369c96b1e5d91962e639251f | p@chr17:7483714..7483726, + |
| 1.19e-126 | FFCP PHASE2:Hg19::chr22:46998103..46998127,-#_84e611626b660d30260e46e90b0663f8 | p@chr22:46998103..46998127, - |
| 1.19e-126 | FFCP PHASE1:Hg19::chr22:46998103..46998127,-#_84e611626b660d30260e46e90b0663f8 | p@chr22:46998103..46998127, - |
| 2.16e-126 | FFCP PHASE1:Hg19::chr19:18285955..18285972,+#_fba4086eacf5afd1da98627bce89761f | p@chr19:18285955..18285972, + |
| 2.16e-126 | FFCP PHASE2:Hg19::chr19:18285955..18285972,+#_fba4086eacf5afd1da98627bce89761f | p@chr19:18285955..18285972, + |
| 3.83e-126 | FFCP PHASE1:Hg19::chr19:51625924..51625942,+#_86f653e2de32b7f766441eccf1de0b97 | p@chr19:51625924..51625942, + |
| 3.83e-126 | FFCP PHASE2:Hg19::chr19:51625924..51625942,+#_86f653e2de32b7f766441eccf1de0b97 | p@chr19:51625924..51625942, + |
| 7.27e-126 | FFCP PHASE1:Hg19::chr4:185266972..185267007,+#_316b79ce5423accaad38c75d10fde2e7 | p@chr4:185266972..185267007, + |
| 7.27e-126 | FFCP PHASE2:Hg19::chr4:185266972..185267007,+#_316b79ce5423accaad38c75d10fde2e7 | p@chr4:185266972..185267007, + |
| 2.66e-125 | FFCP PHASE2:Hg19::chrX:152086449..152086473,+#_eca2e4b93dc4d2c6442809775a8a4a1e | p4@ZNF185 |
| 2.66e-125 | FFCP PHASE1:Hg19::chrX:152086449..152086473,+#_eca2e4b93dc4d2c6442809775a8a4a1e | p4@ZNF185 |
| 7.73e-125 | FFCP PHASE1:Hg19::chr2:145276939..145276960,+#_be349a1e8de9f6b6bb88b623691564af | p2@ZEB2-AS1 |
| 7.73e-125 | FFCP PHASE2:Hg19::chr2:145276939..145276960,+#_be349a1e8de9f6b6bb88b623691564af | p2@ZEB2-AS1 |
| 8.12e-125 | FFCP PHASE2:Hg19::chr15:59469817..59469836,+#_fcd4c25a59dc3dfdb0b62f44d4b2be7f | p@chr15:59469817..59469836, + |
| 8.12e-125 | FFCP PHASE1:Hg19::chr15:59469817..59469836,+#_fcd4c25a59dc3dfdb0b62f44d4b2be7f | p@chr15:59469817..59469836, + |
| 1.56e-124 | FFCP PHASE2:Hg19::chr20:1517945..1517963,-#_8765b9a28df16066fc15597555102345 | p@chr20:1517945..1517963, - |
| 1.56e-124 | FFCP PHASE1:Hg19::chr20:1517945..1517963,-#_8765b9a28df16066fc15597555102345 | p@chr20:1517945..1517963, - |
| 1.65e-124 | FFCP PHASE2:Hg19::chr8:116588888..116588904,+#_8fb7935f71e7fff85d15f3c240e92a0c | p@chr8:116588888..116588904, + |
| 1.65e-124 | FFCP PHASE1:Hg19::chr8:116588888..116588904,+#_8fb7935f71e7fff85d15f3c240e92a0c | p@chr8:116588888..116588904, + |
| 1.87e-124 | FFCP PHASE1:Hg19::chr1:161188686..161188721,+#_db871f724dd1cb535b1e2fd5e1c5a8f9 | p@chr1:161188686..161188721, + |
| 1.87e-124 | FFCP PHASE2:Hg19::chr1:161188686..161188721,+#_db871f724dd1cb535b1e2fd5e1c5a8f9 | p@chr1:161188686..161188721, + |
| 7.08e-124 | FFCP PHASE1:Hg19::chr5:77845080..77845099,-#_1e146dfffc22e0314bc63ce44a75a785 | p10@LHFPL2 |
| 7.08e-124 | FFCP PHASE2:Hg19::chr5:77845080..77845099,-#_1e146dfffc22e0314bc63ce44a75a785 | p10@LHFPL2 |
| 1.48e-123 | FFCP PHASE1:Hg19::chr9:137264970..137264982,+#_aa7511b85f2a1e3cad5c3a78d9f8bfec | p@chr9:137264970..137264982, + |
| 1.48e-123 | FFCP PHASE2:Hg19::chr9:137264970..137264982,+#_aa7511b85f2a1e3cad5c3a78d9f8bfec | p@chr9:137264970..137264982, + |
| 6.01e-123 | FFCP PHASE1:Hg19::chr17:47294661..47294681,+#_9026c774fa910cfd7e1ee56534abe5bc | p@chr17:47294661..47294681, + |
| 6.01e-123 | FFCP PHASE2:Hg19::chr17:47294661..47294681,+#_9026c774fa910cfd7e1ee56534abe5bc | p@chr17:47294661..47294681, + |
| 1.14e-122 | FFCP PHASE1:Hg19::chr1:108593061..108593077,+#_dfae09b8f2f4c1d38c0fe0a717999444 | p@chr1:108593061..108593077, + |
| 1.14e-122 | FFCP PHASE2:Hg19::chr1:108593061..108593077,+#_dfae09b8f2f4c1d38c0fe0a717999444 | p@chr1:108593061..108593077, + |
| 2.07e-122 | FFCP PHASE2:Hg19::chrX:153286067..153286101,-#_929e38fa12176c43a36d6661debcb4c4 | p@chrX:153286067..153286101, - |
| 2.07e-122 | FFCP PHASE1:Hg19::chrX:153286067..153286101,-#_929e38fa12176c43a36d6661debcb4c4 | p@chrX:153286067..153286101, - |
| 3.07e-122 | FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_cc6bdb2fd862874483ad1315c85b8a4d | p@chr14:103587759..103587770, + |
| 3.07e-122 | FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_cc6bdb2fd862874483ad1315c85b8a4d | p@chr14:103587759..103587770, + |
| 7.82e-122 | FFCP PHASE1:Hg19::chr1:17945095..17945126,+#_fc43791f170e5292958c3443d3afaa3b | p7@ARHGEF10L |
| 7.82e-122 | FFCP PHASE2:Hg19::chr1:17945095..17945126,+#_fc43791f170e5292958c3443d3afaa3b | p7@ARHGEF10L |
| 3.27e-121 | FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_07ec231a4b78a6b79863b8737a6ecb9a | p@chr16:50313426..50313459, + |
| 3.27e-121 | FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_07ec231a4b78a6b79863b8737a6ecb9a | p@chr16:50313426..50313459, + |
| 3.74e-121 | FFCP PHASE2:Hg19::chr10:20105868..20105875,+#_33e63c6c9a3afe9a1a7fb4976e44b15c | p8@PLXDC2 |
| 3.74e-121 | FFCP PHASE1:Hg19::chr10:20105868..20105875,+#_33e63c6c9a3afe9a1a7fb4976e44b15c | p8@PLXDC2 |
| 7.36e-121 | FFCP PHASE2:Hg19::chr1:150705526..150705571,-#_9ea519f00fc69383f66ba0e36a069dd6 | p@chr1:150705526..150705571, - |
| 7.36e-121 | FFCP PHASE1:Hg19::chr1:150705526..150705571,-#_9ea519f00fc69383f66ba0e36a069dd6 | p@chr1:150705526..150705571, - |
| 1.75e-120 | FFCP PHASE2:Hg19::chr19:18283959..18283993,+#_b1cab155c87608b88a6c19df27e98097 | p@chr19:18283959..18283993, + |
| 1.75e-120 | FFCP PHASE1:Hg19::chr19:18283959..18283993,+#_b1cab155c87608b88a6c19df27e98097 | p@chr19:18283959..18283993, + |
