CL:0000552: Difference between revisions
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|id=CL:0000552 | |id=CL:0000552 | ||
|name=orthochromatic erythroblast | |name=orthochromatic erythroblast | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="The final stage of the nucleated, immature erythrocyte, before nuclear loss. Typically the cytoplasm is described as acidophilic, but it still shows a faint polychromatic tint. The nucleus is small and initially may still have coarse, clumped chromatin, as in its precursor, the polychromatophilic erythroblast, but ultimately it becomes pyknotic, and appears as a deeply staining, blue-black, homogeneous structureless mass. The nucleus is often eccentric and sometimes lobulated." [ISBN:0721601464] | |def="The final stage of the nucleated, immature erythrocyte, before nuclear loss. Typically the cytoplasm is described as acidophilic, but it still shows a faint polychromatic tint. The nucleus is small and initially may still have coarse, clumped chromatin, as in its precursor, the polychromatophilic erythroblast, but ultimately it becomes pyknotic, and appears as a deeply staining, blue-black, homogeneous structureless mass. The nucleus is often eccentric and sometimes lobulated." [ISBN:0721601464] | ||
|xref=FMA:84646 | |xref=FMA:84646 | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:25, 26 June 2012
| Name: | orthochromatic erythroblast | ||
|---|---|---|---|
| Namespace: | cell;;efo | ||
| Definition: | "The final stage of the nucleated, immature erythrocyte, before nuclear loss. Typically the cytoplasm is described as acidophilic, but it still shows a faint polychromatic tint. The nucleus is small and initially may still have coarse, clumped chromatin, as in its precursor, the polychromatophilic erythroblast, but ultimately it becomes pyknotic, and appears as a deeply staining, blue-black, homogeneous structureless mass. The nucleus is often eccentric and sometimes lobulated." [ISBN:0721601464] | ||
| Xrefs: |
| ||
| Synonyms: |
"acidophilic erythroblast" EXACT [ISBN:0721601464] "eosinophilic erythroblast" EXACT [ISBN:0721601464] "late erythoblast" EXACT [] "orthochromatic normoblast" EXACT [ISBN:0721601464] "pyknotic eto enrythroblast" EXACT [ISBN:0721601464] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000765(erythroblast) |
|---|
Children
| develops from: | CL:0000558 (reticulocyte) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000552 (orthochromatic erythroblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:5247692..5247701,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr11:5247692..5247701, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr17:42392517..42392522,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p17@RUNDC3A |
| 3.29e-195 | FFCP PHASE2:Hg19::chr6:10585684..10585689,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p37@GCNT2 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr2:62801311..62801318,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr2:62801311..62801318, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:5255612..5255613,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p10@HBD |
| 3.29e-195 | FFCP PHASE1:Hg19::chr16:67228546..67228549,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr16:67228546..67228549, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr8:138915590..138915591,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr8:138915590..138915591, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr21:27203678..27203684,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr21:27203678..27203684, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr2:87816262..87816269,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr2:87816262..87816269, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:66676050..66676060,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr11:66676050..66676060, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr22:30680245..30680254,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr22:30680245..30680254, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr4:26378984..26378987,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr4:26378984..26378987, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr3:49726589..49726592,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p7@RNF123 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr11:57415965..57415973,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p5@CLP1 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr13:78682773..78682778,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr13:78682773..78682778, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:57415965..57415973,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p5@CLP1 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr2:112191654..112191660,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr2:112191654..112191660, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:29581179..29581180,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr11:29581179..29581180, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr20:24432163..24432165,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr20:24432163..24432165, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr8:63838198..63838201,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr8:63838198..63838201, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr14:55799575..55799582,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr14:55799575..55799582, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr13:78682773..78682778,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr13:78682773..78682778, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:25598961..25598966,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p5@RHD |
| 3.29e-195 | FFCP PHASE2:Hg19::chr16:227522..227524,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr16:227522..227524, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr4:160049078..160049079,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr4:160049078..160049079, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr10:94679592..94679594,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr10:94679592..94679594, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:25598993..25599007,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p1@RHD |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:5248435..5248444,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr11:5248435..5248444, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr8:101412217..101412218,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr8:101412217..101412218, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:95582484..95582492,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p10@TMEM56 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:5247730..5247736,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr11:5247730..5247736, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr19:1207927..1207939,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr19:1207927..1207939, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr6:50700492..50700495,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr6:50700492..50700495, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:220146675..220146678,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr1:220146675..220146678, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr9:45465498..45465501,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr9:45465498..45465501, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr16:227522..227524,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr16:227522..227524, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr4:82805715..82805717,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr4:82805715..82805717, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr6:155472342..155472346,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr6:155472342..155472346, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:5543682..5543685,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr1:5543682..5543685, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr7:23205190..23205198,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p10@KLHL7 |
| 3.29e-195 | FFCP PHASE2:Hg19::chrX:107332036..107332041,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chrX:107332036..107332041, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr3:49726593..49726603,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p4@RNF123 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:207823590..207823599,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr1:207823590..207823599, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr6:10585661..10585670,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p26@GCNT2 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr20:24432163..24432165,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr20:24432163..24432165, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr14:55799575..55799582,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr14:55799575..55799582, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr4:175593804..175593809,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr4:175593804..175593809, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr18:11740276..11740278,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr18:11740276..11740278, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr13:23969126..23969130,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr13:23969126..23969130, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr11:115492263..115492265,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr11:115492263..115492265, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:25598971..25598977,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p4@RHD |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:2250692..2250695,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr1:2250692..2250695, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:25599018..25599028,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p3@RHD |
| 3.29e-195 | FFCP PHASE1:Hg19::chr2:71833597..71833600,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr2:71833597..71833600, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr2:62801311..62801318,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr2:62801311..62801318, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr4:190941380..190941381,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr4:190941380..190941381, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr3:49726561..49726577,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p3@RNF123 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr19:19535964..19535966,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr19:19535964..19535966, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr13:23969126..23969130,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr13:23969126..23969130, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr22:30680245..30680254,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr22:30680245..30680254, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr10:94679592..94679594,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr10:94679592..94679594, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr8:138915590..138915591,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr8:138915590..138915591, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr21:27203678..27203684,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr21:27203678..27203684, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr7:23205201..23205207,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p13@KLHL7 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr2:87816262..87816269,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr2:87816262..87816269, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr13:106256314..106256318,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr13:106256314..106256318, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr17:27188395..27188398,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p1@MIR451A |
| 3.29e-195 | FFCP PHASE1:Hg19::chr1:158580993..158580998,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr1:158580993..158580998, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr7:23205190..23205198,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p10@KLHL7 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr9:138852021..138852030,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr9:138852021..138852030, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr11:57416011..57416016,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p9@CLP1 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:57416011..57416016,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p9@CLP1 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr8:63838198..63838201,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr8:63838198..63838201, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr18:11740276..11740278,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr18:11740276..11740278, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr6:10585672..10585677,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p42@GCNT2 |
| 3.29e-195 | FFCP PHASE1:Hg19::chr13:106256314..106256318,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr13:106256314..106256318, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr12:131245491..131245492,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr12:131245491..131245492, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:95582484..95582492,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p10@TMEM56 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr6:10585661..10585670,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p26@GCNT2 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:25598993..25599007,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p1@RHD |
| 3.29e-195 | FFCP PHASE2:Hg19::chr16:15616042..15616045,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr16:15616042..15616045, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr19:1207927..1207939,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr19:1207927..1207939, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr17:42366115..42366125,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr17:42366115..42366125, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:220146675..220146678,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr1:220146675..220146678, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr9:123853258..123853276,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr9:123853258..123853276, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr4:82805715..82805717,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr4:82805715..82805717, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr11:115492263..115492265,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr11:115492263..115492265, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr16:15616042..15616045,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr16:15616042..15616045, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr6:155472342..155472346,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr6:155472342..155472346, - |
| 3.29e-195 | FFCP PHASE1:Hg19::chr4:26378984..26378987,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr4:26378984..26378987, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr3:49726589..49726592,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p7@RNF123 |
| 3.29e-195 | FFCP PHASE2:Hg19::chr1:5543682..5543685,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr1:5543682..5543685, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr12:75560876..75560881,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr12:75560876..75560881, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr10:86596455..86596456,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr10:86596455..86596456, + |
| 3.29e-195 | FFCP PHASE1:Hg19::chr17:27188395..27188398,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p1@MIR451A |
| 3.29e-195 | FFCP PHASE1:Hg19::chr2:112191654..112191660,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr2:112191654..112191660, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr16:67228546..67228549,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr16:67228546..67228549, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr14:96742091..96742094,-#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr14:96742091..96742094, - |
| 3.29e-195 | FFCP PHASE2:Hg19::chr12:131245491..131245492,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr12:131245491..131245492, + |
| 3.29e-195 | FFCP PHASE2:Hg19::chr15:71406717..71406718,+#_ccf2239d507bb0b2b1ce7b5538a0129f | p@chr15:71406717..71406718, + |
