CL:0002580: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date=2011-03-03T04:19:46Z | |obo_creation_date=2011-03-03T04:19:46Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:27, 26 June 2012
| Name: | preadipocyte of the breast |
|---|---|
| Namespace: | cell |
| Definition: | "A preadipocyte that is part of the breast." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-03T04:19:46Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002334(preadipocyte) |
|---|
Children
| derives from: | FF:0000139 (human preadipocyte of the breast sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11328-117E5 (Preadipocyte - breast, donor2)
- 11467-119B9 (Preadipocyte - breast, donor1)
- 14318-155D7
- 14319-155D8 (Preadipocyte - breast donor2 (cytoplasmic fraction))
- 14320-155D9 (Preadipocyte - breast, donor2 (nuclear fraction))
- 14336-155F7
- 14337-155F8
- 14338-155F9
Mouse (Mus musculus)
- 11328-117E5 (Preadipocyte - breast, donor2)
- 11467-119B9 (Preadipocyte - breast, donor1)
- 14318-155D7
- 14319-155D8 (Preadipocyte - breast donor2 (cytoplasmic fraction))
- 14320-155D9 (Preadipocyte - breast, donor2 (nuclear fraction))
- 14336-155F7
- 14337-155F8
- 14338-155F9
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002580 (preadipocyte of the breast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.24e-88 | FFCP PHASE2:Hg19::chr6:75474615..75474618,+#_288979292e5120cbb9f15626c73ea844 | p@chr6:75474615..75474618, + |
| 6.24e-88 | FFCP PHASE1:Hg19::chr6:75474615..75474618,+#_288979292e5120cbb9f15626c73ea844 | p@chr6:75474615..75474618, + |
| 5.41e-85 | FFCP PHASE1:Hg19::chr1:240577171..240577181,-#_b9be1fac1a44db0d7e804c01c9093fc0 | p@chr1:240577171..240577181, - |
| 5.41e-85 | FFCP PHASE2:Hg19::chr1:240577171..240577181,-#_b9be1fac1a44db0d7e804c01c9093fc0 | p@chr1:240577171..240577181, - |
| 1.01e-74 | FFCP PHASE2:Hg19::chr7:134430175..134430178,+#_6b2baf3ab0a3c40a2a0329af41780d9b | p85@CALD1 |
| 1.01e-74 | FFCP PHASE1:Hg19::chr7:134430175..134430178,+#_6b2baf3ab0a3c40a2a0329af41780d9b | p85@CALD1 |
| 1.54e-66 | FFCP PHASE2:Hg19::chr4:112437339..112437350,+#_80cb216cc8350b845798233c3c75c20f | p@chr4:112437339..112437350, + |
| 1.54e-66 | FFCP PHASE1:Hg19::chr4:112437339..112437350,+#_80cb216cc8350b845798233c3c75c20f | p@chr4:112437339..112437350, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr22:44140357..44140361,+#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr22:44140357..44140361, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:150870947..150870948,+#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr7:150870947..150870948, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:75794482..75794491,-#_f9c3719c5f6bc556cbc7baff6fa69aab | p19@AL359627 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:3603926..3603929,+#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr1:3603926..3603929, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:150870947..150870948,+#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr7:150870947..150870948, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:35771474..35771476,+#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr5:35771474..35771476, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:75794482..75794491,-#_f9c3719c5f6bc556cbc7baff6fa69aab | p19@AL359627 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:13180474..13180475,-#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr2:13180474..13180475, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:3603926..3603929,+#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr1:3603926..3603929, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:13180474..13180475,-#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr2:13180474..13180475, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr22:44140357..44140361,+#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr22:44140357..44140361, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:35771474..35771476,+#_f9c3719c5f6bc556cbc7baff6fa69aab | p@chr5:35771474..35771476, + |
| 3.01e-66 | FFCP PHASE2:Hg19::chr15:39486361..39486371,-#_337b703ad4af8ad6f924f9e0e3e86d75 | p5@ENST00000560743 |
| 3.01e-66 | FFCP PHASE1:Hg19::chr15:39486361..39486371,-#_337b703ad4af8ad6f924f9e0e3e86d75 | p5@ENST00000560743 |
| 3.35e-66 | FFCP PHASE2:Hg19::chr6:75916067..75916078,-#_d70bd2b569f4d7a7e421a0986958f8a4 | p30@COL12A1 |
| 3.35e-66 | FFCP PHASE1:Hg19::chr6:75916067..75916078,-#_d70bd2b569f4d7a7e421a0986958f8a4 | p30@COL12A1 |
| 4.68e-66 | FFCP PHASE2:Hg19::chr15:39402510..39402513,-#_b5c52548efa08e25f52a415ff72430f5 | p@chr15:39402510..39402513, - |
| 4.68e-66 | FFCP PHASE1:Hg19::chr15:39402510..39402513,-#_b5c52548efa08e25f52a415ff72430f5 | p@chr15:39402510..39402513, - |
| 4.46e-60 | FFCP PHASE1:Hg19::chr19:18899082..18899091,+#_53dd4e5f4ec6258e090edab1e82d3378 | p@chr19:18899082..18899091, + |
| 4.46e-60 | FFCP PHASE2:Hg19::chr19:18899082..18899091,+#_53dd4e5f4ec6258e090edab1e82d3378 | p@chr19:18899082..18899091, + |
| 6.68e-60 | FFCP PHASE2:Hg19::chr1:103471622..103471650,+#_3e1ed62f1c47cbaf4cc18637c9f49439 | p@chr1:103471622..103471650, + |
| 6.68e-60 | FFCP PHASE1:Hg19::chr1:103471622..103471650,+#_3e1ed62f1c47cbaf4cc18637c9f49439 | p@chr1:103471622..103471650, + |
| 1.22e-59 | FFCP PHASE2:Hg19::chr1:240448546..240448559,+#_0ddde7c72f01d3243f48c5a9e745784e | p@chr1:240448546..240448559, + |
| 1.22e-59 | FFCP PHASE1:Hg19::chr1:240448546..240448559,+#_0ddde7c72f01d3243f48c5a9e745784e | p@chr1:240448546..240448559, + |
| 6.02e-55 | FFCP PHASE1:Hg19::chr4:112437251..112437278,+#_6d2585c9432ca74ba8455621c3ee0a30 | p@chr4:112437251..112437278, + |
| 6.02e-55 | FFCP PHASE2:Hg19::chr4:112437251..112437278,+#_6d2585c9432ca74ba8455621c3ee0a30 | p@chr4:112437251..112437278, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr11:66811898..66811900,-#_0c453ba88c404db9c67613b841686af3 | p@chr11:66811898..66811900, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr11:66811898..66811900,-#_0c453ba88c404db9c67613b841686af3 | p@chr11:66811898..66811900, - |
| 6.39e-53 | FFCP PHASE1:Hg19::chr7:73462921..73462932,+#_5ea54fc6bd5192309b0b212f58e62219 | p@chr7:73462921..73462932, + |
| 6.39e-53 | FFCP PHASE2:Hg19::chr7:73462921..73462932,+#_5ea54fc6bd5192309b0b212f58e62219 | p@chr7:73462921..73462932, + |
| 2.64e-50 | FFCP PHASE2:Hg19::chr15:81242191..81242201,+#_6cb86be60c9ea1a6bb588bc26f7652a1 | p19@KIAA1199 |
| 2.64e-50 | FFCP PHASE1:Hg19::chr15:81242191..81242201,+#_6cb86be60c9ea1a6bb588bc26f7652a1 | p19@KIAA1199 |
| 2.25e-46 | FFCP PHASE2:Hg19::chr7:73483140..73483149,+#_232605dc970a7deb86373dc3b5445c21 | p31@ELN |
| 2.25e-46 | FFCP PHASE1:Hg19::chr7:73483140..73483149,+#_232605dc970a7deb86373dc3b5445c21 | p31@ELN |
| 4.87e-46 | FFCP PHASE1:Hg19::chr19:18897380..18897392,+#_6523827df8e247a1c16457dddd05f25f | p@chr19:18897380..18897392, + |
| 4.87e-46 | FFCP PHASE2:Hg19::chr19:18897380..18897392,+#_6523827df8e247a1c16457dddd05f25f | p@chr19:18897380..18897392, + |
| 7.81e-45 | FFCP PHASE2:Hg19::chr6:159660765..159660776,+#_867d8cc5bf517b9dfe41ab7030d4ea7b | p@chr6:159660765..159660776, + |
| 7.81e-45 | FFCP PHASE1:Hg19::chr6:159660765..159660776,+#_867d8cc5bf517b9dfe41ab7030d4ea7b | p@chr6:159660765..159660776, + |
| 1.91e-44 | FFCP PHASE2:Hg19::chr7:22900150..22900172,+#_744c04165d85ee8f4e5fea68fa45bd81 | p@chr7:22900150..22900172, + |
| 1.91e-44 | FFCP PHASE1:Hg19::chr7:22900150..22900172,+#_744c04165d85ee8f4e5fea68fa45bd81 | p@chr7:22900150..22900172, + |
| 3.41e-43 | FFCP PHASE2:Hg19::chr15:68805210..68805226,+#_358fb0e3f3f416ec56ad059b68a21255 | p@chr15:68805210..68805226, + |
| 3.41e-43 | FFCP PHASE2:Hg19::chr2:191745264..191745275,+#_358fb0e3f3f416ec56ad059b68a21255 | p21@GLS |
| 3.41e-43 | FFCP PHASE1:Hg19::chr2:191745264..191745275,+#_358fb0e3f3f416ec56ad059b68a21255 | p21@GLS |
| 3.41e-43 | FFCP PHASE1:Hg19::chr15:68805210..68805226,+#_358fb0e3f3f416ec56ad059b68a21255 | p@chr15:68805210..68805226, + |
| 1.96e-40 | FFCP PHASE2:Hg19::chr19:18895742..18895757,-#_f14e34d663e0d36e35c2eedc6d3da652 | p@chr19:18895742..18895757, - |
| 1.96e-40 | FFCP PHASE1:Hg19::chr19:18895742..18895757,-#_f14e34d663e0d36e35c2eedc6d3da652 | p@chr19:18895742..18895757, - |
| 3.83e-40 | FFCP PHASE2:Hg19::chr19:18900893..18900901,-#_a14cdda6378cd9ac29b616d81a9edba5 | p@chr19:18900893..18900901, - |
| 3.83e-40 | FFCP PHASE1:Hg19::chr19:18900893..18900901,-#_a14cdda6378cd9ac29b616d81a9edba5 | p@chr19:18900893..18900901, - |
| 7.56e-39 | FFCP PHASE2:Hg19::chr4:154926484..154926525,+#_62a4e06cd9c0c1d9d7a9a7a3aac380f7 | p@chr4:154926484..154926525, + |
| 7.56e-39 | FFCP PHASE1:Hg19::chr4:154926484..154926525,+#_62a4e06cd9c0c1d9d7a9a7a3aac380f7 | p@chr4:154926484..154926525, + |
| 1.23e-38 | FFCP PHASE2:Hg19::chr5:111312488..111312498,-#_c546c27e787c3f4ff74171e238c66320 | p35@C5orf13 |
| 1.23e-38 | FFCP PHASE1:Hg19::chr5:111312488..111312498,-#_c546c27e787c3f4ff74171e238c66320 | p35@C5orf13 |
| 2.18e-38 | FFCP PHASE2:Hg19::chr7:85399962..85399979,+#_c00f45bffbe04d58ba874f7b9d2df2e6 | p@chr7:85399962..85399979, + |
| 2.18e-38 | FFCP PHASE2:Hg19::chr15:39534820..39534834,+#_c00f45bffbe04d58ba874f7b9d2df2e6 | p@chr15:39534820..39534834, + |
| 2.18e-38 | FFCP PHASE1:Hg19::chr7:85399962..85399979,+#_c00f45bffbe04d58ba874f7b9d2df2e6 | p@chr7:85399962..85399979, + |
| 2.18e-38 | FFCP PHASE1:Hg19::chr15:39534820..39534834,+#_c00f45bffbe04d58ba874f7b9d2df2e6 | p@chr15:39534820..39534834, + |
| 2.38e-38 | FFCP PHASE2:Hg19::chr19:18899713..18899727,-#_2619f4e37456bc94a3e4827ddb83b59b | p@chr19:18899713..18899727, - |
| 2.38e-38 | FFCP PHASE1:Hg19::chr19:18899713..18899727,-#_2619f4e37456bc94a3e4827ddb83b59b | p@chr19:18899713..18899727, - |
| 3.19e-38 | FFCP PHASE2:Hg19::chr4:169552329..169552340,+#_054f091eec230c70d750b5befa165a11 | p34@PALLD |
| 3.19e-38 | FFCP PHASE1:Hg19::chr4:169552329..169552340,+#_054f091eec230c70d750b5befa165a11 | p34@PALLD |
| 5.08e-38 | FFCP PHASE1:Hg19::chr19:18897406..18897417,-#_4f5a853ac7f66b1c069aeb6da7fed205 | p6@COMP |
| 5.08e-38 | FFCP PHASE2:Hg19::chr19:18897406..18897417,-#_4f5a853ac7f66b1c069aeb6da7fed205 | p6@COMP |
| 5.76e-38 | FFCP PHASE2:Hg19::chr10:105428632..105428639,-#_f44f1dec7c7d98d5c1d182ca48b141a2 | p26@SH3PXD2A |
| 5.76e-38 | FFCP PHASE1:Hg19::chr10:105428632..105428639,-#_f44f1dec7c7d98d5c1d182ca48b141a2 | p26@SH3PXD2A |
| 7.42e-38 | FFCP PHASE1:Hg19::chr19:18899552..18899562,-#_25c5bd411bdfc8952823179525e537aa | p@chr19:18899552..18899562, - |
| 7.42e-38 | FFCP PHASE2:Hg19::chr15:81214436..81214445,+#_25c5bd411bdfc8952823179525e537aa | p13@KIAA1199 |
| 7.42e-38 | FFCP PHASE1:Hg19::chr15:81214436..81214445,+#_25c5bd411bdfc8952823179525e537aa | p13@KIAA1199 |
| 7.42e-38 | FFCP PHASE2:Hg19::chr19:18899552..18899562,-#_25c5bd411bdfc8952823179525e537aa | p@chr19:18899552..18899562, - |
| 2.03e-37 | FFCP PHASE2:Hg19::chr7:137532379..137532400,-#_f6ae9cf896dea5a313e6a7ce397e3a73 | p@chr7:137532379..137532400, - |
| 2.03e-37 | FFCP PHASE1:Hg19::chr7:137532379..137532400,-#_f6ae9cf896dea5a313e6a7ce397e3a73 | p@chr7:137532379..137532400, - |
| 7.74e-36 | FFCP PHASE2:Hg19::chr19:18893583..18893586,+#_d767473561eb9f75d46bffd23fe8b976 | p@chr19:18893583..18893586, + |
| 7.74e-36 | FFCP PHASE1:Hg19::chr19:18893583..18893586,+#_d767473561eb9f75d46bffd23fe8b976 | p@chr19:18893583..18893586, + |
| 1.11e-35 | FFCP PHASE2:Hg19::chr12:8814756..8814767,-#_f92f51229c68c0fbd1b3be57fcc37005 | p19@MFAP5 |
| 1.11e-35 | FFCP PHASE2:Hg19::chr13:102104738..102104747,+#_f92f51229c68c0fbd1b3be57fcc37005 | p11@ITGBL1 |
| 1.11e-35 | FFCP PHASE1:Hg19::chr12:8814756..8814767,-#_f92f51229c68c0fbd1b3be57fcc37005 | p19@MFAP5 |
| 1.11e-35 | FFCP PHASE1:Hg19::chr13:102104738..102104747,+#_f92f51229c68c0fbd1b3be57fcc37005 | p11@ITGBL1 |
| 1.4e-35 | FFCP PHASE1:Hg19::chr6:35216360..35216374,+#_a3711802b27e4c5790ac29b4f4722ccb | p10@SCUBE3 |
| 1.4e-35 | FFCP PHASE2:Hg19::chr6:35216360..35216374,+#_a3711802b27e4c5790ac29b4f4722ccb | p10@SCUBE3 |
| 2.53e-35 | FFCP PHASE2:Hg19::chr15:68631946..68631967,-#_5550d371fc6028477bfd016b92dcbbf2 | p@chr15:68631946..68631967, - |
| 2.53e-35 | FFCP PHASE1:Hg19::chr15:68631946..68631967,-#_5550d371fc6028477bfd016b92dcbbf2 | p@chr15:68631946..68631967, - |
| 3.33e-34 | FFCP PHASE2:Hg19::chr15:39486488..39486494,-#_b26e930d0e9373d67f8805aac57f873f | p6@ENST00000560743 |
| 3.33e-34 | FFCP PHASE1:Hg19::chr15:39486488..39486494,-#_b26e930d0e9373d67f8805aac57f873f | p6@ENST00000560743 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr4:154711058..154711075,+#_7c5197eac83b30fa8ab851e6a9dbb85e | p@chr4:154711058..154711075, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr16:4181309..4181310,-#_7c5197eac83b30fa8ab851e6a9dbb85e | p@chr16:4181309..4181310, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr16:4181309..4181310,-#_7c5197eac83b30fa8ab851e6a9dbb85e | p@chr16:4181309..4181310, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr4:154711058..154711075,+#_7c5197eac83b30fa8ab851e6a9dbb85e | p@chr4:154711058..154711075, + |
| 9.1e-34 | FFCP PHASE1:Hg19::chr9:38437716..38437729,+#_20fc63f4d5361e171d0b6ecd451d902e | p@chr9:38437716..38437729, + |
| 9.1e-34 | FFCP PHASE2:Hg19::chr9:38437716..38437729,+#_20fc63f4d5361e171d0b6ecd451d902e | p@chr9:38437716..38437729, + |
| 1.48e-33 | FFCP PHASE1:Hg19::chr6:101841257..101841271,+#_118417048a700e5052304876f282aef9 | p3@HM149340 |
| 1.48e-33 | FFCP PHASE2:Hg19::chr6:101841257..101841271,+#_118417048a700e5052304876f282aef9 | p3@HM149340 |
| 1.65e-33 | FFCP PHASE2:Hg19::chr7:40251315..40251325,-#_72eaed3c9368ef4e8bcb573a4df1f06a | p@chr7:40251315..40251325, - |
| 1.65e-33 | FFCP PHASE1:Hg19::chr7:40251315..40251325,-#_72eaed3c9368ef4e8bcb573a4df1f06a | p@chr7:40251315..40251325, - |
