CL:0002591: Difference between revisions
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|part_of= | |part_of=UBERON:0002012 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Revision as of 13:04, 27 June 2012
| Name: | smooth muscle cell of the pulmonary artery | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "A smooth muscle of the pulmonary artery." [GOC:tfm] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2011-03-06T05:01:28Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000359(vascular associated smooth muscle cell) |
|---|---|
| part_of: | UBERON:0002012(pulmonary artery) |
Children
| derives from: | FF:0000174 (human smooth muscle cell of pulmonary artery sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11288-117A1 (Smooth Muscle Cells - Pulmonary Artery, donor1)
- 11365-117I6 (Smooth Muscle Cells - Pulmonary Artery, donor2)
- 11437-118H6 (Smooth Muscle Cells - Pulmonary Artery, donor3)
Mouse (Mus musculus)
- 11288-117A1 (Smooth Muscle Cells - Pulmonary Artery, donor1)
- 11365-117I6 (Smooth Muscle Cells - Pulmonary Artery, donor2)
- 11437-118H6 (Smooth Muscle Cells - Pulmonary Artery, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002591 (smooth muscle cell of the pulmonary artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_4add52912e2339b917dc043205ec384f | p@chr8:90366581..90366594, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_4add52912e2339b917dc043205ec384f | p@chr6:21648948..21648949, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_4add52912e2339b917dc043205ec384f | p@chr8:90366581..90366594, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_4add52912e2339b917dc043205ec384f | p@chr6:21648948..21648949, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_aa00c433d07c79bab149dc79088a2a5e | p26@LINC00340 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_aa00c433d07c79bab149dc79088a2a5e | p@chr8:120651826..120651840, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_aa00c433d07c79bab149dc79088a2a5e | p14@FAS |
| 2.55e-98 | FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_aa00c433d07c79bab149dc79088a2a5e | p@chrX:23072856..23072859, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_aa00c433d07c79bab149dc79088a2a5e | p@chr3:158928407..158928414, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_aa00c433d07c79bab149dc79088a2a5e | p@chr8:120651826..120651840, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_aa00c433d07c79bab149dc79088a2a5e | p26@LINC00340 |
| 2.55e-98 | FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_aa00c433d07c79bab149dc79088a2a5e | p@chrX:23072856..23072859, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_aa00c433d07c79bab149dc79088a2a5e | p14@FAS |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_aa00c433d07c79bab149dc79088a2a5e | p@chr3:158928407..158928414, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_b12c7355c0833800822bb79a78be0bd5 | p@chr17:76824975..76824978, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_b12c7355c0833800822bb79a78be0bd5 | p@chr17:76824975..76824978, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_b12c7355c0833800822bb79a78be0bd5 | p@chr11:131614903..131614910, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_b12c7355c0833800822bb79a78be0bd5 | p@chr11:131614903..131614910, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr9:16059821..16059828,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr9:16059821..16059828, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr7:22687639..22687644, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr1:176668544..176668553,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr1:176668544..176668553, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:24645959..24645967,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr4:24645959..24645967, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr19:54466179..54466202,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p1@CACNG8 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:134047162..134047169,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr8:134047162..134047169, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p19@AMOTL1 |
| 4.66e-66 | FFCP PHASE2:Hg19::chrX:140904171..140904173,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chrX:140904171..140904173, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr1:93043102..93043113, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr6:119590894..119590904,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p1@ENST00000406333 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr20:48184812..48184818,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p13@PTGIS |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:38147484..38147500,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr4:38147484..38147500, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:18834859..18834879,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr7:18834859..18834879, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr19:54466179..54466202,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p1@CACNG8 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr1:176668544..176668553,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr1:176668544..176668553, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:134047162..134047169,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr8:134047162..134047169, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr20:48184812..48184818,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p13@PTGIS |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:38147484..38147500,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr4:38147484..38147500, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:18834859..18834879,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr7:18834859..18834879, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p19@AMOTL1 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr9:16059821..16059828,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr9:16059821..16059828, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr7:22687639..22687644, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr6:119590894..119590904,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p1@ENST00000406333 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:24645959..24645967,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr4:24645959..24645967, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chrX:140904171..140904173,+#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chrX:140904171..140904173, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_d03a3a9c2a0aaa1b5d0042777039a032 | p@chr1:93043102..93043113, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr9:33797893..33797903,+#_f512830b6586da88e846e1f5e2002a07 | p@chr9:33797893..33797903, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr9:33797893..33797903,+#_f512830b6586da88e846e1f5e2002a07 | p@chr9:33797893..33797903, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr6:34208414..34208429,+#_e044153cb3fca2265be14bff635e83bc | p16@HMGA1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr19:15509437..15509442,-#_e044153cb3fca2265be14bff635e83bc | p@chr19:15509437..15509442, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr2:73302288..73302299,-#_e044153cb3fca2265be14bff635e83bc | p13@RAB11FIP5 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr10:103040652..103040655,+#_e044153cb3fca2265be14bff635e83bc | p1@ENST00000492301 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr19:10218330..10218339,+#_e044153cb3fca2265be14bff635e83bc | p1@SNORD105 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr4:891819..891820,-#_e044153cb3fca2265be14bff635e83bc | p@chr4:891819..891820, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr19:15509437..15509442,-#_e044153cb3fca2265be14bff635e83bc | p@chr19:15509437..15509442, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr8:123580995..123581003,-#_e044153cb3fca2265be14bff635e83bc | p@chr8:123580995..123581003, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_e044153cb3fca2265be14bff635e83bc | p@chr18:65175930..65175941, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_e044153cb3fca2265be14bff635e83bc | p@chr18:65175930..65175941, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr6:34208414..34208429,+#_e044153cb3fca2265be14bff635e83bc | p16@HMGA1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr10:103040652..103040655,+#_e044153cb3fca2265be14bff635e83bc | p1@ENST00000492301 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr2:73302288..73302299,-#_e044153cb3fca2265be14bff635e83bc | p13@RAB11FIP5 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr4:891819..891820,-#_e044153cb3fca2265be14bff635e83bc | p@chr4:891819..891820, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:61995172..61995199,-#_e044153cb3fca2265be14bff635e83bc | p@chr17:61995172..61995199, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:61995172..61995199,-#_e044153cb3fca2265be14bff635e83bc | p@chr17:61995172..61995199, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr8:123580995..123581003,-#_e044153cb3fca2265be14bff635e83bc | p@chr8:123580995..123581003, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr19:10218330..10218339,+#_e044153cb3fca2265be14bff635e83bc | p1@SNORD105 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr19:681941..681952,+#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr19:681941..681952, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr5:146890197..146890224,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr5:146890197..146890224, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr9:33797981..33798005,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr9:33797981..33798005, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr3:11675748..11675759,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr3:11675748..11675759, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr4:114257151..114257163,+#_7ce2cb16c46fd71901ee0116aece1bfd | p28@ANK2 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:84316409..84316414,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr2:84316409..84316414, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:238116338..238116342,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr2:238116338..238116342, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr11:13484984..13484992,+#_7ce2cb16c46fd71901ee0116aece1bfd | p5@BC031228 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr8:94712896..94712909,+#_7ce2cb16c46fd71901ee0116aece1bfd | p10@FAM92A1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr1:185703364..185703371,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr1:185703364..185703371, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr6:148593641..148593643, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr15:71371688..71371691,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr15:71371688..71371691, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr4:74392579..74392583,+#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr4:74392579..74392583, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr8:37374492..37374499,-#_7ce2cb16c46fd71901ee0116aece1bfd | p1@ENST00000521989 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr19:681941..681952,+#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr19:681941..681952, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr5:146890197..146890224,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr5:146890197..146890224, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr3:11675748..11675759,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr3:11675748..11675759, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr4:114257151..114257163,+#_7ce2cb16c46fd71901ee0116aece1bfd | p28@ANK2 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr11:13484984..13484992,+#_7ce2cb16c46fd71901ee0116aece1bfd | p5@BC031228 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr4:74392579..74392583,+#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr4:74392579..74392583, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr15:71371688..71371691,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr15:71371688..71371691, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr8:94712896..94712909,+#_7ce2cb16c46fd71901ee0116aece1bfd | p10@FAM92A1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr1:185703364..185703371,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr1:185703364..185703371, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr9:33797981..33798005,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr9:33797981..33798005, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:84316409..84316414,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr2:84316409..84316414, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr6:148593641..148593643,+#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr6:148593641..148593643, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:238116338..238116342,-#_7ce2cb16c46fd71901ee0116aece1bfd | p@chr2:238116338..238116342, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr8:37374492..37374499,-#_7ce2cb16c46fd71901ee0116aece1bfd | p1@ENST00000521989 |
| 9.91e-41 | FFCP PHASE1:Hg19::chr5:76102212..76102217,-#_044d1ba4130ebf4581853178884ef43c | p@chr5:76102212..76102217, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chr10:61845000..61845015,-#_044d1ba4130ebf4581853178884ef43c | p@chr10:61845000..61845015, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr5:76102212..76102217,-#_044d1ba4130ebf4581853178884ef43c | p@chr5:76102212..76102217, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr10:61845000..61845015,-#_044d1ba4130ebf4581853178884ef43c | p@chr10:61845000..61845015, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr12:58287614..58287637,-#_fcf04dbdfb6549b406b9f21f781a2a88 | p1@ENST00000548955 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr12:58287614..58287637,-#_fcf04dbdfb6549b406b9f21f781a2a88 | p1@ENST00000548955 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:28621784..28621788,-#_e76f6b57f1d03f8be8b91882f454e045 | p@chr5:28621784..28621788, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr10:13749771..13749780,-#_e76f6b57f1d03f8be8b91882f454e045 | p20@FRMD4A |
