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MacroAPE 1083:Motif64: Difference between revisions

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464-106H5;0.962311!10827-111C8;0.321168!10789-110H6;0.428417!10828-111C9;0.0299562!10788-110H5;0.867729!10792-110H9;0.111463!10765-110E9;0.113733!10829-111D1;0.249413!10830-111D2;0.393839!10831-111D3;0.0402951!10832-111D4;0.181403!10833-111D5;0.139936!10764-110E8;0.270634!10770-110F5;0.06112!10399-106A3;0.0472257!10400-106A4;0.290822!10405-106A9;0.359128!10834-111D6;0.324918!10835-111D7;0.335481!10836-111D8;0.487307!10837-111D9;0.474631!10699-109G6;0.726274!10802-111A1;0.579594!10796-110I4;0.497211!10010-101C1;0.00453292!10810-111A9;0.188211!10421-106C7;0.171916!10708-109H6;0.858113!12235-129G3;0.264994!12236-129G4;0.020237!12237-129G5;0.0837482!10167-103B5;0.0199113!10151-102I7;0.000509284!10428-106D5;0.00323735!10795-110I3;0.543325!10805-111A4;0.46151!10052-101G7;0.562147!10189-103D9;0.0443286!10589-108D4;0.844576!10425-106D2;0.295486!10427-106D4;0.305595!10702-109G9;0.240233!10432-106D9;0.717056!10496-107C1;0.00539921!10718-109I7;0.045101!10011-101C2;0.131442!10053-101G8;0.160063!10686-109F2;0.933391!10084-102B3;0.269933!10012-101C3;0.00336751!10085-102B4;0.00161876!10482-107A5;0.00562601!10419-106C5;0.174886!10080-102A8;0.069988!10760-110E4;0.947322!10709-109H7;0.0508386!10710-109H8;0.00035013!10703-109H1;0.0117375!10719-109I8;0.127111!10642-109A3;0.54313!10177-103C6;0.00655009!10164-103B2;0.00311386!10173-103C2;0.00346254!10166-103B4;0.00373729!10083-102B2;0.00174265!10188-103D8;0.00111276!10552-107I3;0.00105288!10553-107I4;0.0266007!10013-101C4;0.075079!10536-107G5;0.286767!10618-108G6;0.318276!10423-106C9;0.172013!10785-110H2;0.11213!12238-129G6;0.0392039!12239-129G7;0.00210309!12240-129G8;0.209139!10416-106C2;0.0213719!10801-110I9;0.974186!10766-110F1;0.450723!10824-111C5;0.10627!10825-111C6;0.311442!10826-111C7;0.241134!10454-106G4;0.406772!10409-106B4;0.222902!10638-108I8;0.0675238!10636-108I6;5.74962e-05!10513-107D9;0.000512441!10420-106C6;0.338885!10082-102B1;0.915342!10014-101C5;0.806907!10070-101I7;0.480865!10452-106G2;0.631993!10453-106G3;0.722893!10449-106F8;0.794833!10042-101F6;0.940608!10069-101I6;0.00904475!10193-103E4;0.149475!10631-108I1;0.00213522!10438-106E6;0.494292!10488-107B2;0.0453359!10196-103E7;0.186689!10071-101I8;0.695695!10071-101I8;0.359745!10041-101F5;0.00237127!10451-106G1;0.0904576!10450-106F9;0.92515!10604-108F1;0.468656!10605-108F2;2.77317e-05!10606-108F3;0.000194641!10603-108E9;7.98426e-05!10497-107C2;5.97886e-05!10448-106F7;0.00170723!10643-109A4;0.0630997!10426-106D3;0.000434229!10431-106D8;0.0536927!10197-103E8;0.0731621!10443-106F2;0.177922!10815-111B5;0.047189!10816-111B6;0.131357!10817-111B7;0.118682!10015-101C6;0.111848!10410-106B5;0.323023!10054-101G9;0.83342!10758-110E2;2.50355e-06!10711-109H9;0.846615!10040-101F4;0.0939148!10470-106I2;0.000892377!10415-106C1;0.000177952!10198-103E9;0.000323766!10614-108G2;0.658021!10612-108F9;0.00277451!10549-107H9;0.0226415!10615-108G3;0.0667936!10487-107B1;0.000370106!10433-106E1;0.554261!10688-109F4;0.0273985!10444-106F3;0.0214266!10444-106F3;0.953657!10485-107A8;0.843771!10413-106B8;0.00384763!10175-103C4;0.452308!10161-103A8;0.0150766!12131-128D7;0.0124962!10624-108H3;0.108539!10712-109I1;0.0757742!10205-103F7;0.923321!10206-103F8;0.0585972!10207-103F9;0.0685043!10050-101G5;0.363857!10051-101G6;0.668149!10016-101C7;0.100883!10046-101G1;0.122231!10778-110G4;0.0239652!10633-108I3;0.722514!10818-111B8;0.438977!10819-111B9;0.152724!10820-111C1;0.132679!10484-107A7;0.169234!10808-111A7;0.0578416!10169-103B7;0.733192!10153-102I9;0.010106!13425-144D5;0.00645097!13433-144E4;0.721796!13437-144E8;0.811483!11904-125F5;0.975873!11905-125F6;0.26218!10039-101F3;0.151992!10791-110H8;0.00089536!10017-101C8;0.257801!10045-101F9;0.562514!10509-107D5;0.950217!10839-111E2;0.13163!10692-109F8;0.609164!10079-102A7;0.0580244!10078-102A6;0.0472592!10721-110A1;0.279149!10569-108B2;0.485297!10570-108B3;0.037!10571-108B4;0.518348!10647-109A8;0.18451!10752-110D5;0.169709!10782-110G8;0.099848!10726-110A6;0.91247!10018-101C9;0.0478412!10086-102B5;0.114727!10182-103D2;0.583456!10165-103B3;0.00660375!10499-107C4;0.00349796!10408-106B3;0.0429396!10019-101D1;0.0226176!10068-101I5;0.652421!10075-102A3;0.866716!10077-102A5;0.922409!10727-110A7;0.745255!10775-110G1;0.678092!10412-106B7;0.488935!12231-129F8;0.0410737!12232-129F9;0.219249!12233-129G1;0.507979!12234-129G2;0.477427!10414-106B9;0.263286!10170-103B8;0.2587!10183-103D3;0.00324646!10150-102I6;0.0024651!10174-103C3;0.00316059!10155-103A2;0.0229709!10038-101F2;0.00524135!10838-111E1;0.00334617!10759-110E3;0.0497868!10514-107E1;0.12867!10465-106H6;0.895235!10691-109F7;0.304205!10843-111E6;0.149214!10844-111E7;0.24988!11747-123G1;0.00788176!11748-123G2;0.520273!11749-123G3;0.951472!11750-123G4;0.315123!11751-123G5;0.610673!11840-124H4;0.934839!11752-123G6;0.800024!11753-123G7;0.883741!11754-123G8;0.943338!11755-123G9;0.29448!11756-123H1;0.490672!11833-124G6;0.0996983!11760-123H5;0.661996!11836-124G9;0.151648!11758-123H3;0.67621!11835-124G8;0.516417!11762-123H7;0.371084!11838-124H2;0.100325!11757-123H2;0.163189!11759-123H4;0.29331!11761-123H6;0.663354!11842-124H6;0.128046!11837-124H1;0.290307!10568-108B1;0.328848!13230-141I8;0.147154!13231-141I9;0.881584!10696-109G3;0.693271!10493-107B7;0.971957!10494-107B8;0.0152231!10850-111F4;0.0229485!10851-111F5;0.359257!10852-111F6;0.0629333!10853-111F7;0.252038!10854-111F8;0.0305118!10855-111F9;0.0830248!10856-111G1;0.321365!10847-111F1;0.078384!10846-111E9;0.375897!10848-111F2;0.012103!10845-111E8;0.000436807!10857-111G2;0.117827!10858-111G3;0.269211!10156-103A3;0.00383438!11901-125F2;0.00329195!11902-125F3;0.572395!11903-125F4;0.687392!10689-109F5;0.428988!10648-109A9;0.117116!10784-110H1;0.182723!10744-110C6;0.00216531!10772-110F7;0.837488!10474-106I6;0.20952!10600-108E6;0.244977!10684-109E9;0.116922!12226-129F3;0.789314!12227-129F4;0.160041!10508-107D4;0.074647!10539-107G8;0.00343086!10607-108F4;0.00252679!10555-107I6;0.493378!10774-110F9;0.00317004!10637-108I7;0.119919!10663-109C6;0.402166!10728-110A8;0.451353!10729-110A9;0.441121!10430-106D7;0.459514!10730-110B1;0.629519!10813-111B3;0.0262933!10812-111B2;0.687271!10037-101F1;0.462639!10172-103C1;0.00193658!10163-103B1;0.00365346!10076-102A4;0.00713542!10073-102A1;0.00128671!10036-101E9;0.00350298!10195-103E6;0.00126902!10277-104E7;0.00316631!10434-106E2;0.0171778!10550-107I1;0.173751!10545-107H5;0.163113!10544-107H4;0.155543!10704-109H2;0.0499769!10510-107D6;0.742382!10558-107I9;0.293523!10020-101D2;0.714839!10732-110B3;0.322672!10049-101G4;0.169582!10698-109G5;0.782114!10437-106E5;0.159644!10417-106C3;0.00187778!10035-101E8;0.00240432!10171-103B9;0.000731418!10157-103A4;0.00194363!10034-101E7;0.00340754!10072-101I9;0.000888301!10199-103F1;0.00515299!10200-103F2;0.742642!10697-109G4;0.132137!10723-110A3;0.314917!10179-103C8;0.000905323!10160-103A7;1.85099e-07!10180-103C9;1.8491e-07!10162-103A9;0.00496303!10021-101D3;0.00390665!10840-111E3;0.127223!10706-109H4;0.139424!10033-101E6;0.0633654!10032-101E5;0.0015278!10490-107B4;0.000618199!10439-106E7;0.00254811!10022-101D4;0.000207599!10176-103C5;0.270745!10469-106I1;0.0036436!10067-101I4;0.433614!10411-106B6;0.343313!10471-106I3;0.0102371!10030-101E3;1.74163e-05!10475-106I7;6.97909e-05!10787-110H4;0.114981!10477-106I9;0.775149!10695-109G2;0.412894!11771-123I7;0.647672!11772-123I8;0.224755!11773-123I9;0.122683!10093-102C3;0.184887!10442-106F1;0.814568!10442-106F1;0.627591!10201-103F3;0.983461!10639-108I9;0.639295!11843-124H7;0.00542653!11841-124H5;0.00120507!10693-109F9;0.0942997!10436-106E4;0.0327999!10483-107A6;0.075257!10282-104F3;0.0354594!10023-101D5;0.121571!10066-101I3;0.111591!10065-101I2;0.271035!10800-110I8;0.236236!10610-108F7;0.373015!10841-111E4;0.360742!10541-107H1;0.813581!10842-111E5;0.969739!10562-108A4;0.000679697!10024-101D6;0.31606!10064-101I1;0.769039!10609-108F6;0.36413!10048-101G3;0.26534!10781-110G7;0.323684!10181-103D1;0.0221877!10159-103A6;0.026154!10056-101H2;0.0246563!10737-110B8;0.00835496!10025-101D7;0.18136!10044-101F8;0.868595!10424-106D1;0.631551!10463-106H4;0.250719!10616-108G4;0.0107429!10486-107A9;0.421253!10062-101H8;0.149552!10202-103F4;0.863821!10158-103A5;0.524823!10441-106E9;0.0213972!10031-101E4;0.103534!10063-101H9;0.00110891!10063-101H9;0.00666815!11763-123H8;0.11844!11765-123I1;0.697642!11768-123I4;0.718341!10807-111A6;0.663497!10790-110H7;0.183411!10798-110I6;0.949653!10786-110H3;0.608024!10591-108D6;0.624908!10593-108D8;0.79906!10590-108D5;0.987478!10026-101D8;0.813672!10096-102C6;0.80877!10168-103B6;0.983085!10154-103A1;0.00654224!10209-103G2;0.00930732!10061-101H7;0.087639!10027-101D9;0.140824!10043-101F7;0.901783!10783-110G9;0.632095!10028-101E1;1.98385e-05!10060-101H6;0.354332!10203-103F5;0.930168!10059-101H5;0.0404916!10047-101G2;0.156057!10029-101E2;0.441967!10058-101H4;0.252651!10418-106C4;0.101197!10492-107B6;0.0286371!10694-109G1;0.00406108!10797-110I5;0.6637!10057-101H3;0.000184223!10100-102D1;0.291161!10055-101H1;0.478423!10204-103F6;0.780364!10191-103E2;0.793625!10563-108A5;0.105359
|name=motif64
|name=motif64
|tomtom_result=REST#MA0138.2;0;0.000442368;0.210567;0.311905;8;TCAGCAGC;TCAGCACCATGGACAGCGC;-!REST#MA0138.2;1;0.000655262;0.311905;0.311905;8;TCAGCAGC;TTCAGCACCATGGACAGCGCC;+!Myf#MA0055.1;-1;0.00313812;1.49374;0.995829;7;TCAGCAGC;CAGCAGCTGCTG;-!NFE2L2#MA0150.1;5;0.00574424;2.73426;1;6;TCAGCAGC;ATGACTCAGCA;+!CREB1#MA0018.1;4;0.0106574;5.07291;1;8;TCAGCAGC;GACGTCACCAGG;-!HAP4#MA0315.1;5;0.0131492;6.25903;1;8;TCAGCAGC;ACCAATCAGAGGCGA;+!CUP2#MA0287.1;-1;0.0132695;6.31629;1;7;TCAGCAGC;CAGCAAAAATG;+!Mafb#MA0117.1;3;0.0145718;6.9362;1;5;TCAGCAGC;GCGTCAGC;-!NHLH1#MA0048.1;2;0.0147713;7.03112;1;8;TCAGCAGC;GCGCAGCTGCGT;+!ACE2#MA0267.1;1;0.0167103;7.9541;1;6;TCAGCAGC;ACCAGCA;+
}}
}}

Latest revision as of 12:00, 7 September 2012

Full Name: motif64

Motif matrix
POACGT
0100020566
0202056600
0320566000
0400205660
0502056600
0620566000
0723164670135800
0841061340103059

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
REST#MA0138.200.0004423680.2105670.3119058TCAGCAGCTCAGCACCATGGACAGCGC-
REST#MA0138.210.0006552620.3119050.3119058TCAGCAGCTTCAGCACCATGGACAGCGCC+
Myf#MA0055.1-10.003138121.493740.9958297TCAGCAGCCAGCAGCTGCTG-
NFE2L2#MA0150.150.005744242.7342616TCAGCAGCATGACTCAGCA+
CREB1#MA0018.140.01065745.0729118TCAGCAGCGACGTCACCAGG-
HAP4#MA0315.150.01314926.2590318TCAGCAGCACCAATCAGAGGCGA+
CUP2#MA0287.1-10.01326956.3162917TCAGCAGCCAGCAAAAATG+
Mafb#MA0117.130.01457186.936215TCAGCAGCGCGTCAGC-
NHLH1#MA0048.120.01477137.0311218TCAGCAGCGCGCAGCTGCGT+
ACE2#MA0267.110.01671037.954116TCAGCAGCACCAGCA+
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