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MacroAPE 1083:CNhs13458 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;35.221551628159006;107.32391537285035;17.446261264682292;86.2371537011982!2;80.40893436075655;17.745325235792862;83.9413152012388;64.1333071...")
 
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0.000353151!10809-111A8;9.73157e-05!10597-108E3;0.164856!10717-109I6;0.0702933!10455-106G5;0.00312299!10534-107G3;0.909085!10429-106D6;0.342333!10464-106H5;0.912576!10827-111C8;0.920947!10789-110H6;0.568552!10828-111C9;0.750752!10788-110H5;0.234658!10792-110H9;0.733954!10765-110E9;0.460502!10829-111D1;0.520538!10830-111D2;0.637909!10831-111D3;0.464148!10832-111D4;0.466325!10833-111D5;0.575738!10764-110E8;0.579706!10770-110F5;0.858673!10399-106A3;0.444713!10400-106A4;0.733116!10405-106A9;0.901945!10834-111D6;0.8082!10835-111D7;0.612329!10836-111D8;0.0533456!10837-111D9;0.620797!10699-109G6;0.506971!10802-111A1;0.548212!10796-110I4;0.651621!10010-101C1;0.000897234!10810-111A9;0.00959079!10421-106C7;0.0594245!10708-109H6;0.888247!12235-129G3;0.0692031!12236-129G4;0.088864!12237-129G5;0.409014!10167-103B5;0.0537762!10151-102I7;0.25244!10428-106D5;0.101222!10795-110I3;0.0553265!10805-111A4;0.167342!10052-101G7;0.0164518!10189-103D9;0.0119098!10589-108D4;0.000169725!10425-106D2;0.050538!10427-106D4;0.822285!10702-109G9;0.620088!10432-106D9;0.766328!10496-107C1;0.00916052!10718-109I7;0.0103817!10011-101C2;0.945842!10053-101G8;0.0151436!10686-109F2;0.00313976!10084-102B3;0.624063!10012-101C3;0.135587!10085-102B4;0.114889!10482-107A5;0.602252!10419-106C5;0.0140528!10080-102A8;0.045208!10760-110E4;0.0632816!10709-109H7;0.00354796!10710-109H8;0.000165957!10703-109H1;0.00443584!10719-109I8;0.0248409!10642-109A3;0.0474109!10177-103C6;0.0515292!10164-103B2;0.43586!10173-103C2;0.236767!10166-103B4;0.939193!10083-102B2;0.633756!10188-103D8;0.622021!10552-107I3;0.13501!10553-107I4;0.000281896!10013-101C4;0.000299602!10536-107G5;0.0299656!10618-108G6;0.0114898!10423-106C9;0.0383426!10785-110H2;0.0650301!12238-129G6;0.0820025!12239-129G7;0.619849!12240-129G8;0.544892!10416-106C2;0.14463!10801-110I9;0.797202!10766-110F1;0.629698!10824-111C5;0.970681!10825-111C6;0.0138607!10826-111C7;0.0142442!10454-106G4;0.0410898!10409-106B4;0.0294746!10638-108I8;0.53293!10636-108I6;0.0004961!10513-107D9;0.0352999!10420-106C6;0.00173013!10082-102B1;0.207961!10014-101C5;0.0614348!10070-101I7;0.0282319!10452-106G2;0.0525911!10453-106G3;0.989153!10449-106F8;0.616094!10042-101F6;0.592166!10069-101I6;0.0802375!10193-103E4;0.231923!10631-108I1;0.273854!10438-106E6;0.412237!10488-107B2;0.00454465!10196-103E7;0.000836436!10071-101I8;0.211882!10071-101I8;0.143465!10041-101F5;0.654677!10451-106G1;0.00097149!10450-106F9;0.00580167!10604-108F1;0.0277413!10605-108F2;0.047554!10606-108F3;0.00994886!10603-108E9;0.0560439!10497-107C2;0.0619252!10448-106F7;0.00247248!10643-109A4;2.06531e-05!10426-106D3;0.00852685!10431-106D8;0.00404334!10197-103E8;0.000633113!10443-106F2;0.10444!10815-111B5;0.0335448!10816-111B6;7.50003e-05!10817-111B7;2.3473e-05!10015-101C6;2.63474e-05!10410-106B5;0.119588!10054-101G9;0.046799!10758-110E2;0.274674!10711-109H9;0.18866!10040-101F4;0.106429!10470-106I2;0.147854!10415-106C1;0.00493366!10198-103E9;0.0233613!10614-108G2;0.0152518!10612-108F9;0.011164!10549-107H9;0.00326632!10615-108G3;0.0678476!10487-107B1;0.110582!10433-106E1;0.00118283!10688-109F4;0.0308691!10444-106F3;9.43204e-05!10444-106F3;0.512647!10485-107A8;0.616267!10413-106B8;0.0100907!10175-103C4;0.00812203!10161-103A8;0.464379!12131-128D7;0.127267!10624-108H3;0.942624!10712-109I1;0.0528083!10205-103F7;0.667345!10206-103F8;0.13397!10207-103F9;0.0839635!10050-101G5;0.0992061!10051-101G6;0.878856!10016-101C7;0.164778!10046-101G1;0.0712078!10778-110G4;0.138583!10633-108I3;0.914084!10818-111B8;0.0123357!10819-111B9;0.00119421!10820-111C1;0.00155836!10484-107A7;0.00139991!10808-111A7;0.0303051!10169-103B7;0.694243!10153-102I9;0.268502!13425-144D5;0.134452!13433-144E4;0.031565!13437-144E8;0.0197844!11904-125F5;0.024674!11905-125F6;0.539929!10039-101F3;0.979405!10791-110H8;0.124511!10017-101C8;0.00693008!10045-101F9;0.307419!10509-107D5;0.522847!10839-111E2;0.0102571!10692-109F8;0.000109617!10079-102A7;0.00145147!10078-102A6;0.024298!10721-110A1;0.148438!10569-108B2;0.00212166!10570-108B3;0.886349!10571-108B4;0.713096!10647-109A8;0.974564!10752-110D5;0.00996482!10782-110G8;0.592325!10726-110A6;0.361382!10018-101C9;0.065833!10086-102B5;0.993361!10182-103D2;0.67536!10165-103B3;0.30907!10499-107C4;0.202696!10408-106B3;0.0275289!10019-101D1;0.0716457!10068-101I5;0.035907!10075-102A3;0.189313!10077-102A5;0.0216151!10727-110A7;6.18394e-06!10775-110G1;0.833127!10412-106B7;0.743209!12231-129F8;0.0982196!12232-129F9;0.94272!12233-129G1;0.679512!12234-129G2;0.99863!10414-106B9;0.541339!10170-103B8;0.0286184!10183-103D3;0.282052!10150-102I6;0.203314!10174-103C3;0.162106!10155-103A2;0.361323!10038-101F2;0.117731!10838-111E1;0.0755468!10759-110E3;0.0586298!10514-107E1;0.14117!10465-106H6;0.0195737!10691-109F7;0.00104259!10843-111E6;0.329741!10844-111E7;0.0440064!11747-123G1;0.0509228!11748-123G2;0.456086!11749-123G3;0.356499!11750-123G4;0.794139!11751-123G5;0.918275!11840-124H4;0.783116!11752-123G6;0.845959!11753-123G7;0.29203!11754-123G8;0.621308!11755-123G9;0.227328!11756-123H1;0.117674!11833-124G6;0.843246!11760-123H5;0.744544!11836-124G9;0.905701!11758-123H3;0.789664!11835-124G8;0.85119!11762-123H7;0.614331!11838-124H2;0.557215!11757-123H2;0.863806!11759-123H4;0.537468!11761-123H6;0.711875!11842-124H6;0.410303!11837-124H1;0.625006!10568-108B1;0.422249!13230-141I8;0.262122!13231-141I9;0.822307!10696-109G3;0.87484!10493-107B7;0.671907!10494-107B8;0.00604709!10850-111F4;0.0321366!10851-111F5;0.0104975!10852-111F6;0.0651226!10853-111F7;0.0121667!10854-111F8;2.12193e-05!10855-111F9;0.00731982!10856-111G1;0.242783!10847-111F1;0.00312437!10846-111E9;0.594267!10848-111F2;0.0864158!10845-111E8;0.00933392!10857-111G2;0.0390289!10858-111G3;0.00340458!10156-103A3;0.0618984!11901-125F2;0.163479!11902-125F3;0.834058!11903-125F4;0.957945!10689-109F5;0.801316!10648-109A9;0.000217394!10784-110H1;0.000722862!10744-110C6;0.0620462!10772-110F7;0.210154!10474-106I6;0.996154!10600-108E6;0.618075!10684-109E9;0.0280434!12226-129F3;0.0511291!12227-129F4;0.00295697!10508-107D4;0.823657!10539-107G8;0.364172!10607-108F4;0.375991!10555-107I6;0.0111846!10774-110F9;0.257536!10637-108I7;0.00612849!10663-109C6;0.23995!10728-110A8;0.085552!10729-110A9;0.0265991!10430-106D7;0.49284!10730-110B1;0.646321!10813-111B3;0.113255!10812-111B2;0.170249!10037-101F1;0.520532!10172-103C1;0.153948!10163-103B1;0.334242!10076-102A4;0.173691!10073-102A1;0.145162!10036-101E9;0.718095!10195-103E6;0.138418!10277-104E7;0.173044!10434-106E2;0.350352!10550-107I1;0.0384219!10545-107H5;0.000813683!10544-107H4;0.00964697!10704-109H2;0.0244754!10510-107D6;0.399216!10558-107I9;0.138759!10020-101D2;0.0403646!10732-110B3;0.0571603!10049-101G4;0.00325444!10698-109G5;0.455548!10437-106E5;0.0632391!10417-106C3;0.0603306!10035-101E8;0.00783722!10171-103B9;0.158425!10157-103A4;0.2719!10034-101E7;0.146083!10072-101I9;0.140963!10199-103F1;0.71476!10200-103F2;0.0369075!10697-109G4;0.0758495!10723-110A3;0.166073!10179-103C8;0.0271737!10160-103A7;0.679357!10180-103C9;0.540201!10162-103A9;0.621429!10021-101D3;0.457933!10840-111E3;0.0244124!10706-109H4;0.81566!10033-101E6;0.0394869!10032-101E5;0.135171!10490-107B4;0.124244!10439-106E7;0.000735109!10022-101D4;0.0136057!10176-103C5;0.0313214!10469-106I1;0.291253!10067-101I4;0.000619326!10411-106B6;0.291209!10471-106I3;0.00967343!10030-101E3;0.000381512!10475-106I7;0.0737009!10787-110H4;0.0737119!10477-106I9;0.0675909!10695-109G2;0.0227489!11771-123I7;0.925185!11772-123I8;0.000197988!11773-123I9;0.000358022!10093-102C3;0.0293699!10442-106F1;0.059439!10442-106F1;0.0147085!10201-103F3;0.0702813!10639-108I9;0.220374!11843-124H7;0.00175006!11841-124H5;3.14178e-08!10693-109F9;2.43878e-05!10436-106E4;0.000116493!10483-107A6;0.00164299!10282-104F3;0.0346229!10023-101D5;0.694806!10066-101I3;0.536646!10065-101I2;0.403055!10800-110I8;0.333988!10610-108F7;0.0640326!10841-111E4;0.0206994!10541-107H1;0.02199!10842-111E5;0.0566075!10562-108A4;0.131482!10024-101D6;0.145053!10064-101I1;0.0409922!10609-108F6;0.306017!10048-101G3;0.0525644!10781-110G7;0.0421077!10181-103D1;0.0845726!10159-103A6;0.126273!10056-101H2;0.0686469!10737-110B8;0.265006!10025-101D7;0.660771!10044-101F8;3.00281e-06!10424-106D1;0.000248884!10463-106H4;0.627765!10616-108G4;0.00264518!10486-107A9;0.112851!10062-101H8;0.00125812!10202-103F4;0.0868625!10158-103A5;0.0466533!10441-106E9;0.0989469!10031-101E4;0.037837!10063-101H9;0.110372!10063-101H9;0.736828!11763-123H8;0.0965517!11765-123I1;0.716397!11768-123I4;0.718325!10807-111A6;0.722438!10790-110H7;0.0673553!10798-110I6;0.0211125!10786-110H3;0.013804!10591-108D6;0.0707918!10593-108D8;0.0130091!10590-108D5;0.177584!10026-101D8;0.0343737!10096-102C6;0.444921!10168-103B6;0.321489!10154-103A1;0.290262!10209-103G2;0.153027!10061-101H7;0.0791092!10027-101D9;0.318695!10043-101F7;0.00221339!10783-110G9;0.000245084!10028-101E1;0.0543719!10060-101H6;0.428939!10203-103F5;0.52126!10059-101H5;0.301168!10047-101G2;0.681283!10029-101E2;0.000962342!10058-101H4;0.0227078!10418-106C4;0.180858!10492-107B6;0.0257982!10694-109G1;2.69789e-05!10797-110I5;0.454704!10057-101H3;0.095517!10100-102D1;0.477599!10055-101H1;0.00787621!10204-103F6;0.321041!10191-103E2;0.0300345!10563-108A5;0.00166878
|name=CNhs13458_bl_f1
|name=CNhs13458_bl_f1
|tomtom_result=ELF5#MA0136.1;0;0.000700196;0.333293;0.666586;9;CGCTGCCTTCTG;TACTTCCTT;+!CTCF#MA0139.1;0;0.00335683;1.59785;1;12;CGCTGCCTTCTG;TAGCGCCCCCTGGTGGCCA;-!RME1#MA0370.1;-3;0.00464623;2.21161;1;9;CGCTGCCTTCTG;TTCCTTTGGA;-!SFL1#MA0377.1;2;0.00657036;3.12749;1;12;CGCTGCCTTCTG;TTTTATTTCTTCTATTCTCTA;-!SPI1#MA0080.2;-1;0.0093071;4.43018;1;7;CGCTGCCTTCTG;ACTTCCT;-!Klf4#MA0039.1;-5;0.0108313;5.15568;1;7;CGCTGCCTTCTG;CCTTCCTTTA;-!MOT3#MA0340.1;-3;0.0149986;7.13932;1;6;CGCTGCCTTCTG;TACCTT;-!USV1#MA0413.1;0;0.0155152;7.38522;1;12;CGCTGCCTTCTG;AAATTCCCCCTGAATTTGTG;+!TFAP2A#MA0003.1;-4;0.0156195;7.4349;1;8;CGCTGCCTTCTG;GCCCGGGGG;+!znf143#MA0088.1;9;0.017333;8.25053;1;11;CGCTGCCTTCTG;GATTTCCCATAATGCCTTGC;+!abi4#MA0123.1;0;0.0178926;8.5169;1;10;CGCTGCCTTCTG;CGGTGCCCCC;+!GCR2#MA0305.1;-1;0.018134;8.63177;1;7;CGCTGCCTTCTG;GCTTCCT;+!HMG-I/Y#MA0045.1;1;0.0185572;8.83321;1;12;CGCTGCCTTCTG;GTTTTTCCATTTGTTG;-
}}
}}

Latest revision as of 12:15, 7 September 2012

Full Name: CNhs13458_bl_f1

Motif matrix
POACGT
135.221551628159006107.3239153728503517.44626126468229286.2371537011982
280.4089343607565517.74532523579286283.941315201238864.13330716910161
385.08940993689687133.64634888363860.840016622152773226.6531065242015
489.021836178016366.2758955063189468.247604519816266142.6835457627382
50.354228651987380350.08691310204850838147.0299559437847698.75778426906916
61.2046145681346168240.626341025660250.91260966726705473.4853167058280854
70.0245.498106216055450.00.7307757508345529
813.38114426723488645.2882107843976341.4957451257241452186.06378178953327
97.04525973595426370.8577568306198310.926668530907312157.3991968694085
1012.683859880694394136.7017746184616859.7307097991628737.11253766857096
1146.433918550224841.5620751954769851.81411688098093106.41877134020716
1230.2925600349024834.915522554746346104.1152705997180276.90552877752302

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ELF5#MA0136.100.0007001960.3332930.6665869CGCTGCCTTCTGTACTTCCTT+
CTCF#MA0139.100.003356831.59785112CGCTGCCTTCTGTAGCGCCCCCTGGTGGCCA-
RME1#MA0370.1-30.004646232.2116119CGCTGCCTTCTGTTCCTTTGGA-
SFL1#MA0377.120.006570363.12749112CGCTGCCTTCTGTTTTATTTCTTCTATTCTCTA-
SPI1#MA0080.2-10.00930714.4301817CGCTGCCTTCTGACTTCCT-
Klf4#MA0039.1-50.01083135.1556817CGCTGCCTTCTGCCTTCCTTTA-
MOT3#MA0340.1-30.01499867.1393216CGCTGCCTTCTGTACCTT-
USV1#MA0413.100.01551527.38522112CGCTGCCTTCTGAAATTCCCCCTGAATTTGTG+
TFAP2A#MA0003.1-40.01561957.434918CGCTGCCTTCTGGCCCGGGGG+
znf143#MA0088.190.0173338.25053111CGCTGCCTTCTGGATTTCCCATAATGCCTTGC+
abi4#MA0123.100.01789268.5169110CGCTGCCTTCTGCGGTGCCCCC+
GCR2#MA0305.1-10.0181348.6317717CGCTGCCTTCTGGCTTCCT+
HMG-I/Y#MA0045.110.01855728.83321112CGCTGCCTTCTGGTTTTTCCATTTGTTG-
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