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MacroAPE 1083:Motif CAGTNT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;6512;0;0!02;6512;0;0;0!03;0;0;6512;0!04;0;0;0;6512!05;1628;1628;1628;1628!06;0;0;0;6512 |macroape_1083_sample_pvalues=11376-118A8;0.3884...")
 
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828-111C9;0.484388!10788-110H5;0.487446!10792-110H9;0.200199!10765-110E9;0.327142!10829-111D1;0.253648!10830-111D2;0.123619!10831-111D3;0.400069!10832-111D4;0.482532!10833-111D5;0.362672!10764-110E8;0.299403!10770-110F5;0.257722!10399-106A3;0.480379!10400-106A4;0.403608!10405-106A9;0.339388!10834-111D6;0.334372!10835-111D7;0.288851!10836-111D8;0.901835!10837-111D9;0.862687!10699-109G6;0.402473!10802-111A1;0.960035!10796-110I4;0.658823!10010-101C1;0.627875!10810-111A9;0.223179!10421-106C7;0.827768!10708-109H6;0.743047!12235-129G3;0.131114!12236-129G4;0.183412!12237-129G5;0.0683119!10167-103B5;0.662919!10151-102I7;0.4834!10428-106D5;0.472463!10795-110I3;0.280884!10805-111A4;0.448687!10052-101G7;0.190549!10189-103D9;0.124943!10589-108D4;0.0505664!10425-106D2;0.118831!10427-106D4;0.0780842!10702-109G9;0.558462!10432-106D9;0.0853826!10496-107C1;0.243726!10718-109I7;0.285027!10011-101C2;0.176023!10053-101G8;0.0245265!10686-109F2;0.282048!10084-102B3;0.0205882!10012-101C3;0.689954!10085-102B4;0.349694!10482-107A5;0.986765!10419-106C5;0.51397!10080-102A8;0.244445!10760-110E4;0.199933!10709-109H7;0.11498!10710-109H8;0.38828!10703-109H1;0.736521!10719-109I8;0.240449!10642-109A3;0.0986105!10177-103C6;0.632432!10164-103B2;0.386878!10173-103C2;0.351249!10166-103B4;0.620158!10083-102B2;0.47411!10188-103D8;0.901229!10552-107I3;0.347934!10553-107I4;0.125618!10013-101C4;0.0576125!10536-107G5;0.0874501!10618-108G6;0.834839!10423-106C9;0.408836!10785-110H2;0.341926!12238-129G6;0.722189!12239-129G7;0.158405!12240-129G8;0.00838195!10416-106C2;0.129241!10801-110I9;0.258143!10766-110F1;0.498401!10824-111C5;0.530765!10825-111C6;0.310486!10826-111C7;0.401708!10454-106G4;0.365627!10409-106B4;0.294793!10638-108I8;0.526157!10636-108I6;0.16103!10513-107D9;0.538897!10420-106C6;0.107945!10082-102B1;0.2263!10014-101C5;0.337453!10070-101I7;0.156873!10452-106G2;0.126021!10453-106G3;0.703508!10449-106F8;0.998496!10042-101F6;0.97268!10069-101I6;0.353103!10193-103E4;0.531216!10631-108I1;0.582037!10438-106E6;0.248389!10488-107B2;0.241738!10196-103E7;0.0924364!10071-101I8;0.0278405!10071-101I8;0.306771!10041-101F5;0.499889!10451-106G1;0.0174145!10450-106F9;0.144453!10604-108F1;0.0755271!10605-108F2;0.463427!10606-108F3;0.198061!10603-108E9;0.534639!10497-107C2;0.296797!10448-106F7;0.277497!10643-109A4;0.912985!10426-106D3;0.428136!10431-106D8;0.304728!10197-103E8;0.247046!10443-106F2;0.189112!10815-111B5;0.47458!10816-111B6;0.481455!10817-111B7;0.480895!10015-101C6;0.453771!10410-106B5;0.125361!10054-101G9;0.831498!10758-110E2;0.274264!10711-109H9;0.383196!10040-101F4;0.476711!10470-106I2;0.350078!10415-106C1;0.511623!10198-103E9;0.800744!10614-108G2;0.146211!10612-108F9;0.250723!10549-107H9;0.156639!10615-108G3;0.25057!10487-107B1;0.609942!10433-106E1;0.0915814!10688-109F4;0.0624335!10444-106F3;0.273025!10444-106F3;0.153911!10485-107A8;0.107163!10413-106B8;0.23899!10175-103C4;0.261066!10161-103A8;0.407177!12131-128D7;0.391703!10624-108H3;0.562288!10712-109I1;0.898985!10205-103F7;0.474611!10206-103F8;0.150478!10207-103F9;0.106487!10050-101G5;0.0385741!10051-101G6;0.836602!10016-101C7;0.668272!10046-101G1;0.420273!10778-110G4;0.19822!10633-108I3;0.0732121!10818-111B8;0.07086!10819-111B9;0.077797!10820-111C1;0.0821012!10484-107A7;0.0833276!10808-111A7;0.454247!10169-103B7;0.277317!10153-102I9;0.447397!13425-144D5;0.42103!13433-144E4;0.0292466!13437-144E8;0.0215227!11904-125F5;0.0211219!11905-125F6;0.927011!10039-101F3;0.659783!10791-110H8;0.378513!10017-101C8;0.0757495!10045-101F9;0.244648!10509-107D5;0.264598!10839-111E2;0.441509!10692-109F8;0.0106763!10079-102A7;0.0773194!10078-102A6;0.340284!10721-110A1;0.598169!10569-108B2;0.947038!10570-108B3;0.89613!10571-108B4;0.442122!10647-109A8;0.464398!10752-110D5;0.641323!10782-110G8;0.664782!10726-110A6;0.331765!10018-101C9;0.864207!10086-102B5;0.221253!10182-103D2;0.31233!10165-103B3;0.299929!10499-107C4;0.379044!10408-106B3;0.100546!10019-101D1;0.905262!10068-101I5;0.0954467!10075-102A3;0.0372161!10077-102A5;0.251514!10727-110A7;0.907991!10775-110G1;0.716513!10412-106B7;0.334886!12231-129F8;0.437823!12232-129F9;0.752228!12233-129G1;0.364834!12234-129G2;0.757749!10414-106B9;0.71143!10170-103B8;0.434773!10183-103D3;0.388086!10150-102I6;0.390301!10174-103C3;0.304173!10155-103A2;0.262036!10038-101F2;0.337692!10838-111E1;0.294988!10759-110E3;0.0398427!10514-107E1;0.545164!10465-106H6;0.471239!10691-109F7;0.604846!10843-111E6;0.664435!10844-111E7;0.0576481!11747-123G1;0.180347!11748-123G2;0.538381!11749-123G3;0.58307!11750-123G4;0.473275!11751-123G5;0.68871!11840-124H4;0.706435!11752-123G6;0.639404!11753-123G7;0.57998!11754-123G8;0.530692!11755-123G9;0.653925!11756-123H1;0.548389!11833-124G6;0.339344!11760-123H5;0.599059!11836-124G9;0.646472!11758-123H3;0.849218!11835-124G8;0.861937!11762-123H7;0.108843!11838-124H2;0.793534!11757-123H2;0.430882!11759-123H4;0.206855!11761-123H6;0.635476!11842-124H6;0.95812!11837-124H1;0.771618!10568-108B1;0.228046!13230-141I8;0.777479!13231-141I9;0.703409!10696-109G3;0.611875!10493-107B7;0.0223861!10494-107B8;0.588699!10850-111F4;0.522178!10851-111F5;0.536112!10852-111F6;0.151482!10853-111F7;0.530929!10854-111F8;0.314602!10855-111F9;0.680805!10856-111G1;0.128155!10847-111F1;0.0694123!10846-111E9;0.894098!10848-111F2;0.131608!10845-111E8;0.366475!10857-111G2;0.14616!10858-111G3;0.810199!10156-103A3;0.517211!11901-125F2;0.307325!11902-125F3;0.989508!11903-125F4;0.718215!10689-109F5;0.616184!10648-109A9;0.94814!10784-110H1;0.163968!10744-110C6;0.110513!10772-110F7;0.913912!10474-106I6;0.338753!10600-108E6;0.340076!10684-109E9;0.104614!12226-129F3;0.779448!12227-129F4;0.128549!10508-107D4;0.553306!10539-107G8;0.699091!10607-108F4;0.382459!10555-107I6;0.0151631!10774-110F9;0.980293!10637-108I7;0.025589!10663-109C6;0.377008!10728-110A8;0.178091!10729-110A9;0.0643342!10430-106D7;0.231233!10730-110B1;0.397402!10813-111B3;0.874203!10812-111B2;0.486388!10037-101F1;0.245074!10172-103C1;0.355012!10163-103B1;0.35177!10076-102A4;0.291222!10073-102A1;0.485119!10036-101E9;0.593977!10195-103E6;0.46341!10277-104E7;0.395305!10434-106E2;0.131863!10550-107I1;0.155939!10545-107H5;0.0988029!10544-107H4;0.105886!10704-109H2;0.331302!10510-107D6;0.0618162!10558-107I9;0.741636!10020-101D2;0.0163838!10732-110B3;0.0824622!10049-101G4;0.677545!10698-109G5;0.592101!10437-106E5;0.618393!10417-106C3;0.0277445!10035-101E8;0.372566!10171-103B9;0.36911!10157-103A4;0.400199!10034-101E7;0.278255!10072-101I9;0.377895!10199-103F1;0.571239!10200-103F2;0.31701!10697-109G4;0.14102!10723-110A3;0.833699!10179-103C8;0.949231!10160-103A7;0.405049!10180-103C9;0.398127!10162-103A9;0.202369!10021-101D3;0.0941972!10840-111E3;0.00030361!10706-109H4;0.670587!10033-101E6;0.186806!10032-101E5;0.324279!10490-107B4;0.441061!10439-106E7;0.114393!10022-101D4;0.219556!10176-103C5;0.0437713!10469-106I1;0.400596!10067-101I4;0.617349!10411-106B6;0.103615!10471-106I3;0.60361!10030-101E3;0.486427!10475-106I7;0.196001!10787-110H4;0.177647!10477-106I9;0.897389!10695-109G2;0.69354!11771-123I7;0.213406!11772-123I8;0.0365237!11773-123I9;0.323825!10093-102C3;0.998272!10442-106F1;0.252711!10442-106F1;0.610748!10201-103F3;0.618354!10639-108I9;0.0274084!11843-124H7;0.795767!11841-124H5;0.102551!10693-109F9;0.206035!10436-106E4;0.107398!10483-107A6;0.625792!10282-104F3;0.265916!10023-101D5;0.749268!10066-101I3;0.262639!10065-101I2;0.731744!10800-110I8;0.248236!10610-108F7;0.566097!10841-111E4;0.76543!10541-107H1;0.279553!10842-111E5;0.266972!10562-108A4;0.168214!10024-101D6;0.87184!10064-101I1;0.238502!10609-108F6;0.467242!10048-101G3;0.673912!10781-110G7;0.0290538!10181-103D1;0.766524!10159-103A6;0.288972!10056-101H2;0.32595!10737-110B8;0.318585!10025-101D7;0.079342!10044-101F8;0.488803!10424-106D1;0.484857!10463-106H4;0.983751!10616-108G4;0.307322!10486-107A9;0.348889!10062-101H8;0.562965!10202-103F4;0.212227!10158-103A5;0.16718!10441-106E9;0.44469!10031-101E4;0.769955!10063-101H9;0.44879!10063-101H9;0.652849!11763-123H8;0.250115!11765-123I1;0.540174!11768-123I4;0.90436!10807-111A6;0.838117!10790-110H7;0.393611!10798-110I6;0.298665!10786-110H3;0.276696!10591-108D6;0.221274!10593-108D8;0.0180048!10590-108D5;0.140616!10026-101D8;0.0147192!10096-102C6;0.664087!10168-103B6;0.589942!10154-103A1;0.406108!10209-103G2;0.384045!10061-101H7;0.220627!10027-101D9;0.240527!10043-101F7;0.478711!10783-110G9;0.20872!10028-101E1;0.00926845!10060-101H6;0.201891!10203-103F5;0.231961!10059-101H5;0.326721!10047-101G2;0.391336!10029-101E2;0.101609!10058-101H4;0.230399!10418-106C4;0.192656!10492-107B6;0.331484!10694-109G1;0.5113!10797-110I5;0.209999!10057-101H3;0.0602009!10100-102D1;0.0822378!10055-101H1;0.0539688!10204-103F6;0.0947247!10191-103E2;0.0863069!10563-108A5;0.30537
|name=motif_CAGTNT
|name=motif_CAGTNT
|tomtom_result=STAT1#MA0137.1;0;0.0112193;5.34037;1;6;CAGTAT;CAGTTTCATTTTCC;-
}}
}}

Latest revision as of 12:25, 7 September 2012

Full Name: motif_CAGTNT

Motif matrix
POACGT
010651200
026512000
030065120
040006512
051628162816281628
060006512

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
STAT1#MA0137.100.01121935.3403716CAGTATCAGTTTCATTTTCC-
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