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MacroAPE 1083:CNhs11828 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;37.78718706719838;156.93087062426326;106.31633293015507;30.802417306821127!2;9.192577682500922;271.96876541598664;13.831808770840144;36.8436...")
 
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27-111C8;0.243378!10789-110H6;0.0453665!10828-111C9;0.0201486!10788-110H5;0.0690346!10792-110H9;0.0133888!10765-110E9;0.014918!10829-111D1;0.0219366!10830-111D2;0.0234267!10831-111D3;0.103932!10832-111D4;0.126782!10833-111D5;0.023894!10764-110E8;0.0183614!10770-110F5;0.178119!10399-106A3;0.00399412!10400-106A4;0.0252132!10405-106A9;0.0219285!10834-111D6;0.0227039!10835-111D7;0.0822218!10836-111D8;0.023348!10837-111D9;0.294594!10699-109G6;0.0709615!10802-111A1;0.14915!10796-110I4;0.155981!10010-101C1;0.267686!10810-111A9;0.120088!10421-106C7;0.307603!10708-109H6;0.047157!12235-129G3;0.268127!12236-129G4;0.919922!12237-129G5;0.358135!10167-103B5;0.564671!10151-102I7;0.00139293!10428-106D5;0.00118963!10795-110I3;0.798477!10805-111A4;0.138604!10052-101G7;0.164524!10189-103D9;0.0712452!10589-108D4;0.0102121!10425-106D2;0.226925!10427-106D4;0.639151!10702-109G9;0.235024!10432-106D9;0.929775!10496-107C1;0.234077!10718-109I7;0.482877!10011-101C2;0.00209637!10053-101G8;0.103071!10686-109F2;0.553842!10084-102B3;0.677097!10012-101C3;0.00402319!10085-102B4;0.00147853!10482-107A5;0.00307741!10419-106C5;0.69801!10080-102A8;0.355252!10760-110E4;0.133495!10709-109H7;0.0365417!10710-109H8;0.0143872!10703-109H1;0.370901!10719-109I8;0.479153!10642-109A3;0.691548!10177-103C6;0.599348!10164-103B2;0.00405841!10173-103C2;0.00202361!10166-103B4;0.00529811!10083-102B2;0.000782826!10188-103D8;0.00296141!10552-107I3;0.00181483!10553-107I4;0.0530833!10013-101C4;0.672438!10536-107G5;0.139812!10618-108G6;0.613409!10423-106C9;0.112599!10785-110H2;0.0406717!12238-129G6;0.254267!12239-129G7;0.908322!12240-129G8;0.615364!10416-106C2;0.766651!10801-110I9;0.143388!10766-110F1;0.058382!10824-111C5;0.0490679!10825-111C6;0.0136839!10826-111C7;0.0100808!10454-106G4;0.0146617!10409-106B4;0.00366567!10638-108I8;0.0295977!10636-108I6;0.204319!10513-107D9;0.128906!10420-106C6;0.125888!10082-102B1;0.842911!10014-101C5;0.0554389!10070-101I7;0.0485899!10452-106G2;0.0104006!10453-106G3;0.576638!10449-106F8;0.693719!10042-101F6;0.729679!10069-101I6;0.00745036!10193-103E4;0.210244!10631-108I1;0.00207313!10438-106E6;0.125837!10488-107B2;0.329336!10196-103E7;0.0194637!10071-101I8;0.119794!10071-101I8;0.0124673!10041-101F5;0.00271178!10451-106G1;0.030752!10450-106F9;0.105185!10604-108F1;0.411425!10605-108F2;0.780786!10606-108F3;0.00350187!10603-108E9;0.588999!10497-107C2;0.584005!10448-106F7;0.427117!10643-109A4;0.171746!10426-106D3;0.46396!10431-106D8;0.0808898!10197-103E8;0.0513042!10443-106F2;0.177149!10815-111B5;0.490185!10816-111B6;0.0167808!10817-111B7;0.0533737!10015-101C6;0.0226339!10410-106B5;0.193691!10054-101G9;0.212228!10758-110E2;0.0353621!10711-109H9;0.903227!10040-101F4;0.153126!10470-106I2;0.00101321!10415-106C1;0.0773704!10198-103E9;0.608175!10614-108G2;0.0300336!10612-108F9;0.186693!10549-107H9;0.629868!10615-108G3;0.470623!10487-107B1;0.701834!10433-106E1;0.00768624!10688-109F4;0.0458004!10444-106F3;0.847077!10444-106F3;0.51303!10485-107A8;0.525643!10413-106B8;0.294829!10175-103C4;0.0609482!10161-103A8;0.00446775!12131-128D7;0.00423237!10624-108H3;0.993241!10712-109I1;0.483309!10205-103F7;0.114011!10206-103F8;0.0304547!10207-103F9;0.0184013!10050-101G5;0.0091136!10051-101G6;0.132434!10016-101C7;0.0648442!10046-101G1;0.0234029!10778-110G4;0.0054156!10633-108I3;0.559097!10818-111B8;0.300913!10819-111B9;0.305724!10820-111C1;0.313491!10484-107A7;0.333329!10808-111A7;0.673351!10169-103B7;0.102364!10153-102I9;0.00112841!13425-144D5;0.00174753!13433-144E4;0.748275!13437-144E8;0.792569!11904-125F5;0.347766!11905-125F6;0.973042!10039-101F3;0.651901!10791-110H8;0.00128419!10017-101C8;0.181667!10045-101F9;0.356253!10509-107D5;0.101064!10839-111E2;0.821161!10692-109F8;0.240308!10079-102A7;0.698177!10078-102A6;0.031769!10721-110A1;0.136007!10569-108B2;0.07792!10570-108B3;0.482781!10571-108B4;0.371265!10647-109A8;0.472004!10752-110D5;0.549737!10782-110G8;0.0888367!10726-110A6;0.344667!10018-101C9;0.300741!10086-102B5;0.250377!10182-103D2;0.623024!10165-103B3;0.00485678!10499-107C4;0.00448507!10408-106B3;0.268619!10019-101D1;0.277093!10068-101I5;0.0520669!10075-102A3;0.0425551!10077-102A5;0.0304578!10727-110A7;0.0802057!10775-110G1;0.245562!10412-106B7;0.175176!12231-129F8;0.310433!12232-129F9;0.210108!12233-129G1;0.255137!12234-129G2;0.451921!10414-106B9;0.510633!10170-103B8;0.622596!10183-103D3;0.00102088!10150-102I6;0.00168916!10174-103C3;0.000787391!10155-103A2;0.0366332!10038-101F2;0.00410998!10838-111E1;0.00725579!10759-110E3;0.467405!10514-107E1;0.892151!10465-106H6;0.292147!10691-109F7;0.39855!10843-111E6;0.31503!10844-111E7;0.932919!11747-123G1;0.909143!11748-123G2;0.149611!11749-123G3;0.526522!11750-123G4;0.207943!11751-123G5;0.406937!11840-124H4;0.575932!11752-123G6;0.164738!11753-123G7;0.709934!11754-123G8;0.536541!11755-123G9;0.544589!11756-123H1;0.820903!11833-124G6;0.945923!11760-123H5;0.173114!11836-124G9;0.839475!11758-123H3;0.434374!11835-124G8;0.800089!11762-123H7;0.735277!11838-124H2;0.339368!11757-123H2;0.271775!11759-123H4;0.0461429!11761-123H6;0.579507!11842-124H6;0.711489!11837-124H1;0.318212!10568-108B1;0.502461!13230-141I8;0.00867438!13231-141I9;0.512569!10696-109G3;0.624286!10493-107B7;0.0434483!10494-107B8;0.332289!10850-111F4;0.599858!10851-111F5;0.00688853!10852-111F6;0.023732!10853-111F7;0.033463!10854-111F8;0.0088436!10855-111F9;0.184517!10856-111G1;0.393044!10847-111F1;0.00180743!10846-111E9;0.183852!10848-111F2;0.75243!10845-111E8;0.239932!10857-111G2;0.638096!10858-111G3;0.00734513!10156-103A3;0.0005514!11901-125F2;0.00111371!11902-125F3;0.807043!11903-125F4;0.971701!10689-109F5;0.804208!10648-109A9;0.00213609!10784-110H1;0.00166491!10744-110C6;0.811361!10772-110F7;0.682667!10474-106I6;0.00436141!10600-108E6;0.233409!10684-109E9;0.793234!12226-129F3;0.0618637!12227-129F4;0.350231!10508-107D4;0.0182203!10539-107G8;0.485678!10607-108F4;0.451759!10555-107I6;0.299472!10774-110F9;0.838505!10637-108I7;0.127227!10663-109C6;0.585228!10728-110A8;0.133531!10729-110A9;0.784489!10430-106D7;0.702879!10730-110B1;0.339432!10813-111B3;0.512779!10812-111B2;0.822768!10037-101F1;0.998419!10172-103C1;0.00165454!10163-103B1;0.000663561!10076-102A4;0.0012167!10073-102A1;0.00161497!10036-101E9;0.00477067!10195-103E6;0.00106643!10277-104E7;0.00247455!10434-106E2;0.0136867!10550-107I1;0.253225!10545-107H5;0.22404!10544-107H4;0.207185!10704-109H2;0.1218!10510-107D6;0.555596!10558-107I9;0.514141!10020-101D2;0.927607!10732-110B3;0.113483!10049-101G4;0.0273805!10698-109G5;0.000283275!10437-106E5;0.246938!10417-106C3;0.112423!10035-101E8;0.243879!10171-103B9;0.000748438!10157-103A4;0.00102577!10034-101E7;0.000695723!10072-101I9;0.000973705!10199-103F1;0.00509794!10200-103F2;0.266497!10697-109G4;0.189089!10723-110A3;0.507285!10179-103C8;0.927212!10160-103A7;0.00664665!10180-103C9;0.00199352!10162-103A9;0.0895102!10021-101D3;0.0188865!10840-111E3;0.116773!10706-109H4;0.209435!10033-101E6;0.649567!10032-101E5;0.00213985!10490-107B4;0.000959707!10439-106E7;0.0237431!10022-101D4;0.320928!10176-103C5;0.0679778!10469-106I1;0.00166074!10067-101I4;0.336495!10411-106B6;0.0055066!10471-106I3;0.797492!10030-101E3;0.0964259!10475-106I7;0.00691589!10787-110H4;0.299901!10477-106I9;0.452588!10695-109G2;0.59498!11771-123I7;0.438975!11772-123I8;0.93529!11773-123I9;0.870373!10093-102C3;0.165854!10442-106F1;0.126721!10442-106F1;0.0302948!10201-103F3;0.0464488!10639-108I9;0.19259!11843-124H7;0.446148!11841-124H5;0.0529658!10693-109F9;0.0219258!10436-106E4;0.0884039!10483-107A6;0.0268021!10282-104F3;0.803623!10023-101D5;0.651594!10066-101I3;0.447729!10065-101I2;0.472775!10800-110I8;0.0735794!10610-108F7;0.387799!10841-111E4;0.938395!10541-107H1;0.220827!10842-111E5;0.564537!10562-108A4;0.824486!10024-101D6;0.774033!10064-101I1;0.0208896!10609-108F6;0.0148864!10048-101G3;0.616736!10781-110G7;0.122894!10181-103D1;0.522464!10159-103A6;0.0163644!10056-101H2;0.0112485!10737-110B8;0.0185194!10025-101D7;0.685165!10044-101F8;0.124674!10424-106D1;0.060212!10463-106H4;0.339142!10616-108G4;0.649545!10486-107A9;0.202368!10062-101H8;0.0476622!10202-103F4;0.0100582!10158-103A5;0.0997274!10441-106E9;0.0182418!10031-101E4;0.858503!10063-101H9;0.00178976!10063-101H9;0.0039635!11763-123H8;0.0213883!11765-123I1;0.632796!11768-123I4;0.660793!10807-111A6;0.253582!10790-110H7;0.832149!10798-110I6;0.696147!10786-110H3;0.284922!10591-108D6;0.779658!10593-108D8;0.75062!10590-108D5;0.280689!10026-101D8;0.225261!10096-102C6;0.629655!10168-103B6;0.789264!10154-103A1;0.00627317!10209-103G2;0.00364609!10061-101H7;0.230816!10027-101D9;0.0722857!10043-101F7;0.760618!10783-110G9;0.581484!10028-101E1;0.865025!10060-101H6;0.035998!10203-103F5;0.00798927!10059-101H5;0.237898!10047-101G2;0.347387!10029-101E2;0.0833556!10058-101H4;0.155832!10418-106C4;0.133404!10492-107B6;0.604191!10694-109G1;0.0959954!10797-110I5;0.094935!10057-101H3;0.541716!10100-102D1;0.36972!10055-101H1;0.0754792!10204-103F6;0.0937995!10191-103E2;0.0757424!10563-108A5;0.0757736
|name=CNhs11828_bl_f2
|name=CNhs11828_bl_f2
|tomtom_result=SP1#MA0079.2;-2;0.000635379;0.30244;0.604881;10;CCCTCCTCCCCA;CCCCGCCCCC;+!Pax4#MA0068.1;17;0.00169963;0.809025;0.809025;12;CCCTCCTCCCCA;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!YGR067C#MA0425.1;-1;0.00343174;1.63351;0.93876;11;CCCTCCTCCCCA;ACCCCACTTTTTTG;+!YML081W#MA0431.1;-1;0.00394437;1.87752;0.93876;9;CCCTCCTCCCCA;ACCCCGCAC;+!btd#MA0443.1;-3;0.00888061;4.22717;1;9;CCCTCCTCCCCA;TCCGCCCCCT;-!Trl#MA0205.1;-2;0.00932805;4.44015;1;10;CCCTCCTCCCCA;TTGCTCTCTC;+!MZF1_5-13#MA0057.1;1;0.0137077;6.52485;1;9;CCCTCCTCCCCA;TTCCCCCTAC;-!MZF1_1-4#MA0056.1;-6;0.0147106;7.00225;1;6;CCCTCCTCCCCA;TCCCCA;-!ZNF354C#MA0130.1;-2;0.0156366;7.44302;1;6;CCCTCCTCCCCA;ATCCAC;+!Klf4#MA0039.1;0;0.0181288;8.6293;1;10;CCCTCCTCCCCA;CCTTCCTTTA;-!RREB1#MA0073.1;7;0.0182812;8.70185;1;12;CCCTCCTCCCCA;CCCCAAACCACCCCCCCCCC;+!CHA4#MA0283.1;-1;0.0191149;9.0987;1;8;CCCTCCTCCCCA;TCTCCGCC;-
}}
}}

Latest revision as of 12:36, 7 September 2012

Full Name: CNhs11828_bl_f2

Motif matrix
POACGT
137.78718706719838156.93087062426326106.3163329301550730.802417306821127
29.192577682500922271.9687654159866413.83180877084014436.84365605911034
389.15248079246233207.237412031347211.98887497405753423.458040130570836
412.46122545710825681.069389642965641.238696308258696197.0674965201052
513.973884393479233303.83865907055378.1981066671732745.826157797231563
613.578273968564933315.512672939630651.2463429001043611.4995181201379675
723.3499153444301550.00.0308.48689258400765
80.0330.827678711444261.00912921699357420.0
948.246128057740776156.351066301250572.1590804433631647125.08053312608331
1053.05872734562895231.151195574216825.34239005508044322.284494953511633
1139.25940386554392223.8269771327910328.20811948716393840.542307442938814
12119.28880091766366105.3594326578326326.4474254045243680.74114894841718

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.2-20.0006353790.302440.60488110CCCTCCTCCCCACCCCGCCCCC+
Pax4#MA0068.1170.001699630.8090250.80902512CCCTCCTCCCCAGAAAAATTTCCCATACTCCACTCCCCCCCC+
YGR067C#MA0425.1-10.003431741.633510.9387611CCCTCCTCCCCAACCCCACTTTTTTG+
YML081W#MA0431.1-10.003944371.877520.938769CCCTCCTCCCCAACCCCGCAC+
btd#MA0443.1-30.008880614.2271719CCCTCCTCCCCATCCGCCCCCT-
Trl#MA0205.1-20.009328054.44015110CCCTCCTCCCCATTGCTCTCTC+
MZF1_5-13#MA0057.110.01370776.5248519CCCTCCTCCCCATTCCCCCTAC-
MZF1_1-4#MA0056.1-60.01471067.0022516CCCTCCTCCCCATCCCCA-
ZNF354C#MA0130.1-20.01563667.4430216CCCTCCTCCCCAATCCAC+
Klf4#MA0039.100.01812888.6293110CCCTCCTCCCCACCTTCCTTTA-
RREB1#MA0073.170.01828128.70185112CCCTCCTCCCCACCCCAAACCACCCCCCCCCC+
CHA4#MA0283.1-10.01911499.098718CCCTCCTCCCCATCTCCGCC-
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