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MacroAPE 1083:Motif991: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;35605;83460;9236;10105!02;138406;0;0;0!03;0;138406;0;0!04;138406;0;0;0!05;98003;10478;29925;0!06;138406;0;0;0 |macroape_1083_sample_pvalue...")
 
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0464-106H5;0.630512!10827-111C8;0.731521!10789-110H6;0.418359!10828-111C9;0.418196!10788-110H5;0.887919!10792-110H9;0.58972!10765-110E9;0.74673!10829-111D1;0.568861!10830-111D2;0.61559!10831-111D3;0.804816!10832-111D4;0.191767!10833-111D5;0.762714!10764-110E8;0.622735!10770-110F5;0.859898!10399-106A3;0.959222!10400-106A4;0.597509!10405-106A9;0.572092!10834-111D6;0.504464!10835-111D7;0.886663!10836-111D8;0.520333!10837-111D9;0.144585!10699-109G6;0.434276!10802-111A1;0.600613!10796-110I4;0.600355!10010-101C1;0.515756!10810-111A9;0.875803!10421-106C7;0.315844!10708-109H6;0.805379!12235-129G3;0.16062!12236-129G4;0.295351!12237-129G5;0.512997!10167-103B5;0.663824!10151-102I7;0.00787829!10428-106D5;0.0117931!10795-110I3;0.620972!10805-111A4;0.338818!10052-101G7;0.496273!10189-103D9;0.960979!10589-108D4;0.483133!10425-106D2;0.780565!10427-106D4;0.917443!10702-109G9;0.639331!10432-106D9;0.054124!10496-107C1;0.0584787!10718-109I7;0.573329!10011-101C2;0.675856!10053-101G8;0.74441!10686-109F2;0.668307!10084-102B3;0.286997!10012-101C3;0.0102017!10085-102B4;0.00588916!10482-107A5;0.00146481!10419-106C5;0.544319!10080-102A8;0.979075!10760-110E4;0.800566!10709-109H7;0.742435!10710-109H8;0.226144!10703-109H1;0.0319636!10719-109I8;0.562129!10642-109A3;0.63764!10177-103C6;0.254015!10164-103B2;0.020202!10173-103C2;0.0190032!10166-103B4;0.0271733!10083-102B2;0.0303674!10188-103D8;0.0243874!10552-107I3;0.0248061!10553-107I4;0.372013!10013-101C4;0.784694!10536-107G5;0.728415!10618-108G6;0.846871!10423-106C9;0.360914!10785-110H2;0.130557!12238-129G6;0.119538!12239-129G7;0.221552!12240-129G8;0.00996317!10416-106C2;0.360498!10801-110I9;0.311889!10766-110F1;0.86236!10824-111C5;0.25552!10825-111C6;0.3188!10826-111C7;0.263322!10454-106G4;0.274408!10409-106B4;0.274108!10638-108I8;0.368195!10636-108I6;0.534161!10513-107D9;0.0801843!10420-106C6;0.280892!10082-102B1;0.351537!10014-101C5;0.781824!10070-101I7;0.574898!10452-106G2;0.522534!10453-106G3;0.742131!10449-106F8;0.686472!10042-101F6;0.724794!10069-101I6;0.0140999!10193-103E4;0.976055!10631-108I1;0.0138912!10438-106E6;0.798877!10488-107B2;0.0788005!10196-103E7;0.119816!10071-101I8;0.796697!10071-101I8;0.169948!10041-101F5;0.0011852!10451-106G1;0.391498!10450-106F9;0.295486!10604-108F1;0.247292!10605-108F2;0.0376443!10606-108F3;0.00893003!10603-108E9;0.0959349!10497-107C2;0.157157!10448-106F7;0.0771837!10643-109A4;0.994089!10426-106D3;0.409308!10431-106D8;0.199669!10197-103E8;0.532716!10443-106F2;0.951278!10815-111B5;0.582481!10816-111B6;0.278794!10817-111B7;0.371256!10015-101C6;0.245496!10410-106B5;0.971932!10054-101G9;0.925313!10758-110E2;0.10005!10711-109H9;0.483599!10040-101F4;0.0516651!10470-106I2;0.00986823!10415-106C1;0.0861254!10198-103E9;0.209192!10614-108G2;0.387435!10612-108F9;0.357518!10549-107H9;0.301968!10615-108G3;0.504701!10487-107B1;0.673657!10433-106E1;0.247004!10688-109F4;0.561776!10444-106F3;0.0694155!10444-106F3;0.490277!10485-107A8;0.445368!10413-106B8;0.827372!10175-103C4;0.715581!10161-103A8;0.00986401!12131-128D7;0.0133759!10624-108H3;0.625555!10712-109I1;0.571129!10205-103F7;0.416655!10206-103F8;0.401897!10207-103F9;0.651608!10050-101G5;0.410518!10051-101G6;0.464089!10016-101C7;0.976231!10046-101G1;0.997691!10778-110G4;0.405893!10633-108I3;0.195062!10818-111B8;0.757517!10819-111B9;0.820524!10820-111C1;0.845267!10484-107A7;0.798663!10808-111A7;0.417468!10169-103B7;0.582272!10153-102I9;0.0159912!13425-144D5;0.0116734!13433-144E4;0.912996!13437-144E8;0.98707!11904-125F5;0.828032!11905-125F6;0.713474!10039-101F3;0.863389!10791-110H8;0.00939437!10017-101C8;0.383442!10045-101F9;0.796285!10509-107D5;0.306311!10839-111E2;0.287601!10692-109F8;0.430284!10079-102A7;0.183389!10078-102A6;0.814564!10721-110A1;0.979082!10569-108B2;0.315778!10570-108B3;0.149764!10571-108B4;0.335015!10647-109A8;0.0667293!10752-110D5;0.794502!10782-110G8;0.286638!10726-110A6;0.190059!10018-101C9;0.10297!10086-102B5;0.823616!10182-103D2;0.964137!10165-103B3;0.0118996!10499-107C4;0.00823932!10408-106B3;0.248443!10019-101D1;0.015225!10068-101I5;0.982805!10075-102A3;0.42951!10077-102A5;0.9505!10727-110A7;0.736785!10775-110G1;0.754189!10412-106B7;0.117708!12231-129F8;0.859049!12232-129F9;0.738327!12233-129G1;0.848847!12234-129G2;0.812192!10414-106B9;0.85602!10170-103B8;0.567775!10183-103D3;0.0133729!10150-102I6;0.00864328!10174-103C3;0.0111334!10155-103A2;0.0184222!10038-101F2;0.0150261!10838-111E1;0.0179354!10759-110E3;0.282239!10514-107E1;0.925541!10465-106H6;0.169409!10691-109F7;0.0528209!10843-111E6;0.128815!10844-111E7;0.329081!11747-123G1;0.0783895!11748-123G2;0.0572478!11749-123G3;0.00900186!11750-123G4;0.0593127!11751-123G5;0.0870543!11840-124H4;0.0403592!11752-123G6;0.286651!11753-123G7;0.032056!11754-123G8;0.261897!11755-123G9;0.506993!11756-123H1;0.103498!11833-124G6;0.2587!11760-123H5;0.330698!11836-124G9;0.245461!11758-123H3;0.448538!11835-124G8;0.356098!11762-123H7;0.381665!11838-124H2;0.5986!11757-123H2;0.294728!11759-123H4;0.697854!11761-123H6;0.327075!11842-124H6;0.98456!11837-124H1;0.358923!10568-108B1;0.420128!13230-141I8;0.809917!13231-141I9;0.125997!10696-109G3;0.18465!10493-107B7;0.364446!10494-107B8;0.223681!10850-111F4;0.531997!10851-111F5;0.737518!10852-111F6;0.36513!10853-111F7;0.788645!10854-111F8;0.0641031!10855-111F9;0.810557!10856-111G1;0.635672!10847-111F1;0.79713!10846-111E9;0.497055!10848-111F2;0.282626!10845-111E8;0.217285!10857-111G2;0.774806!10858-111G3;0.294113!10156-103A3;0.197858!11901-125F2;0.0114267!11902-125F3;0.858522!11903-125F4;0.649682!10689-109F5;0.879305!10648-109A9;0.102433!10784-110H1;0.41728!10744-110C6;0.0293872!10772-110F7;0.252177!10474-106I6;0.609325!10600-108E6;0.828459!10684-109E9;0.134754!12226-129F3;0.116422!12227-129F4;0.370378!10508-107D4;0.33821!10539-107G8;0.0669733!10607-108F4;0.152167!10555-107I6;0.596385!10774-110F9;0.220868!10637-108I7;0.95048!10663-109C6;0.345615!10728-110A8;0.404086!10729-110A9;0.921173!10430-106D7;0.176993!10730-110B1;0.783204!10813-111B3;0.973649!10812-111B2;0.0249122!10037-101F1;0.194696!10172-103C1;0.0116642!10163-103B1;0.00629246!10076-102A4;0.0106445!10073-102A1;0.0111102!10036-101E9;0.00406869!10195-103E6;0.00533756!10277-104E7;0.00740867!10434-106E2;0.0240952!10550-107I1;0.678192!10545-107H5;0.535235!10544-107H4;0.0281631!10704-109H2;0.13296!10510-107D6;0.142977!10558-107I9;0.236739!10020-101D2;0.562882!10732-110B3;0.60213!10049-101G4;0.420991!10698-109G5;0.442285!10437-106E5;0.671369!10417-106C3;0.00118069!10035-101E8;0.589177!10171-103B9;0.00871635!10157-103A4;0.00582165!10034-101E7;0.00987939!10072-101I9;0.0066051!10199-103F1;0.00468905!10200-103F2;0.633412!10697-109G4;0.785045!10723-110A3;0.813313!10179-103C8;0.854839!10160-103A7;0.0447269!10180-103C9;0.0554502!10162-103A9;0.233198!10021-101D3;0.220622!10840-111E3;0.436162!10706-109H4;0.67382!10033-101E6;0.911671!10032-101E5;0.0175577!10490-107B4;0.00533327!10439-106E7;0.341315!10022-101D4;0.577672!10176-103C5;0.547274!10469-106I1;0.0185005!10067-101I4;0.0948921!10411-106B6;0.0299271!10471-106I3;0.809477!10030-101E3;0.329576!10475-106I7;0.0798728!10787-110H4;0.265773!10477-106I9;0.176615!10695-109G2;0.848563!11771-123I7;0.166542!11772-123I8;0.82221!11773-123I9;0.896865!10093-102C3;0.996837!10442-106F1;0.75039!10442-106F1;0.238117!10201-103F3;0.317383!10639-108I9;0.836028!11843-124H7;0.456061!11841-124H5;0.0249619!10693-109F9;0.0938615!10436-106E4;0.671418!10483-107A6;0.504121!10282-104F3;0.473028!10023-101D5;0.941316!10066-101I3;0.934241!10065-101I2;0.799643!10800-110I8;0.525194!10610-108F7;0.652285!10841-111E4;0.0359049!10541-107H1;0.771224!10842-111E5;0.96493!10562-108A4;0.13617!10024-101D6;0.431368!10064-101I1;0.339133!10609-108F6;0.294169!10048-101G3;0.114678!10781-110G7;0.871221!10181-103D1;0.861546!10159-103A6;0.0127463!10056-101H2;0.0132967!10737-110B8;0.0157258!10025-101D7;0.0368042!10044-101F8;0.948412!10424-106D1;0.411783!10463-106H4;0.941013!10616-108G4;0.605057!10486-107A9;0.422281!10062-101H8;0.345764!10202-103F4;0.305017!10158-103A5;0.62841!10441-106E9;0.0153413!10031-101E4;0.486585!10063-101H9;0.00464402!10063-101H9;0.0015664!11763-123H8;0.0564269!11765-123I1;0.0370313!11768-123I4;0.0453109!10807-111A6;0.0379429!10790-110H7;0.854537!10798-110I6;0.729877!10786-110H3;0.777005!10591-108D6;0.739948!10593-108D8;0.702001!10590-108D5;0.788164!10026-101D8;0.415152!10096-102C6;0.0682155!10168-103B6;0.0240537!10154-103A1;0.0166707!10209-103G2;0.0109714!10061-101H7;0.847399!10027-101D9;0.632847!10043-101F7;0.376961!10783-110G9;0.377502!10028-101E1;0.297706!10060-101H6;0.548376!10203-103F5;0.8479!10059-101H5;0.779455!10047-101G2;0.830699!10029-101E2;0.85615!10058-101H4;0.854322!10418-106C4;0.614763!10492-107B6;0.81036!10694-109G1;0.370611!10797-110I5;0.125238!10057-101H3;0.311741!10100-102D1;0.774421!10055-101H1;0.430767!10204-103F6;0.408016!10191-103E2;0.628119!10563-108A5;0.572132
|name=motif991
|name=motif991
|tomtom_result=NDT80#MA0343.1;8;0.000341293;0.162455;0.324911;6;CACAAA;TTTCCGGCCACAAAAACGCAA;+!SOX10#MA0442.1;-1;0.00325915;1.55136;0.985697;5;CACAAA;ACAAAG;-!RUNX1#MA0002.2;4;0.00370321;1.76273;0.985697;6;CACAAA;TAACCACAATA;-!RUNX1#MA0002.2;4;0.00414159;1.97139;0.985697;6;CACAAA;AAACCACAGAC;-!br_Z1#MA0010.1;6;0.0105772;5.03473;1;6;CACAAA;GTAATAAACAAATC;+!FOXI1#MA0042.1;1;0.0114481;5.44931;1;6;CACAAA;AAACAAACATCC;-!hb#MA0049.1;1;0.0130503;6.21196;1;6;CACAAA;GCATAAAAAA;+!Abd-B#MA0165.1;1;0.0153164;7.29059;1;6;CACAAA;TCATAAA;-!MATA1#MA0327.1;1;0.0153164;7.29059;1;6;CACAAA;ACACAAT;+!FKH1#MA0296.1;9;0.016451;7.83067;1;6;CACAAA;TGAATTGTAAACAAAGAGGA;+!Sox2#MA0143.1;7;0.0169392;8.06304;1;6;CACAAA;TTTGCATAACAAAGG;-!HOXA5#MA0158.1;0;0.0181683;8.64813;1;6;CACAAA;CACTAATT;+!Foxd3#MA0041.1;1;0.0186936;8.89817;1;6;CACAAA;AAACAAACATTC;-!CUP9#MA0288.1;3;0.0191438;9.11244;1;6;CACAAA;TGACACATT;+!Pou5f1#MA0142.1;8;0.0206288;9.8193;1;6;CACAAA;ATTTGCATAACAAAG;-
}}
}}

Latest revision as of 12:39, 7 September 2012

Full Name: motif991

Motif matrix
POACGT
013560583460923610105
02138406000
03013840600
04138406000
059800310478299250
06138406000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NDT80#MA0343.180.0003412930.1624550.3249116CACAAATTTCCGGCCACAAAAACGCAA+
SOX10#MA0442.1-10.003259151.551360.9856975CACAAAACAAAG-
RUNX1#MA0002.240.003703211.762730.9856976CACAAATAACCACAATA-
RUNX1#MA0002.240.004141591.971390.9856976CACAAAAAACCACAGAC-
br_Z1#MA0010.160.01057725.0347316CACAAAGTAATAAACAAATC+
FOXI1#MA0042.110.01144815.4493116CACAAAAAACAAACATCC-
hb#MA0049.110.01305036.2119616CACAAAGCATAAAAAA+
Abd-B#MA0165.110.01531647.2905916CACAAATCATAAA-
MATA1#MA0327.110.01531647.2905916CACAAAACACAAT+
FKH1#MA0296.190.0164517.8306716CACAAATGAATTGTAAACAAAGAGGA+
Sox2#MA0143.170.01693928.0630416CACAAATTTGCATAACAAAGG-
HOXA5#MA0158.100.01816838.6481316CACAAACACTAATT+
Foxd3#MA0041.110.01869368.8981716CACAAAAAACAAACATTC-
CUP9#MA0288.130.01914389.1124416CACAAATGACACATT+
Pou5f1#MA0142.180.02062889.819316CACAAAATTTGCATAACAAAG-
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