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MacroAPE 1083:CNhs12856 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;656.4373942051008;795.247839250446;746.8994132301991;224.4473464994483!2;913.5665933666859;257.1353648405635;363.9345162975018;888.395518680...")
 
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A6;0.255354!10809-111A8;0.15504!10597-108E3;0.000446677!10717-109I6;0.00357781!10455-106G5;0.000348876!10534-107G3;0.0399619!10429-106D6;0.00991689!10464-106H5;0.0130502!10827-111C8;0.0123644!10789-110H6;0.347675!10828-111C9;0.427492!10788-110H5;0.151452!10792-110H9;0.104892!10765-110E9;0.282793!10829-111D1;0.406053!10830-111D2;0.142963!10831-111D3;0.23049!10832-111D4;0.192469!10833-111D5;0.101375!10764-110E8;0.0916335!10770-110F5;0.121661!10399-106A3;0.258004!10400-106A4;0.0553005!10405-106A9;0.0436559!10834-111D6;0.0381047!10835-111D7;0.222311!10836-111D8;0.0365266!10837-111D9;0.0558855!10699-109G6;0.236798!10802-111A1;0.0959534!10796-110I4;0.0771201!10010-101C1;0.0102554!10810-111A9;0.000131992!10421-106C7;0.000251512!10708-109H6;0.117769!12235-129G3;0.0107915!12236-129G4;0.133794!12237-129G5;0.0435269!10167-103B5;0.301203!10151-102I7;0.313642!10428-106D5;0.210115!10795-110I3;0.0754265!10805-111A4;0.100815!10052-101G7;0.00281921!10189-103D9;0.000243406!10589-108D4;6.9959e-05!10425-106D2;0.00264323!10427-106D4;0.0577723!10702-109G9;0.00466027!10432-106D9;0.023387!10496-107C1;0.00138725!10718-109I7;0.00458473!10011-101C2;0.131449!10053-101G8;9.04681e-05!10686-109F2;0.106425!10084-102B3;0.738789!10012-101C3;0.0990109!10085-102B4;0.103247!10482-107A5;0.650214!10419-106C5;0.000573333!10080-102A8;0.00369303!10760-110E4;0.00225121!10709-109H7;0.000669466!10710-109H8;0.0456603!10703-109H1;0.00270889!10719-109I8;0.000594075!10642-109A3;3.72633e-06!10177-103C6;0.00460636!10164-103B2;0.106229!10173-103C2;0.222215!10166-103B4;0.395583!10083-102B2;0.428284!10188-103D8;0.305679!10552-107I3;0.134332!10553-107I4;0.00337668!10013-101C4;0.00394881!10536-107G5;0.000483347!10618-108G6;0.000514832!10423-106C9;0.00176726!10785-110H2;0.0069255!12238-129G6;0.003542!12239-129G7;0.00288542!12240-129G8;0.021488!10416-106C2;0.00800748!10801-110I9;0.0973906!10766-110F1;0.179209!10824-111C5;0.18225!10825-111C6;0.0239517!10826-111C7;0.0275323!10454-106G4;0.0215079!10409-106B4;0.0245807!10638-108I8;0.149531!10636-108I6;0.00101013!10513-107D9;0.000253524!10420-106C6;0.000242986!10082-102B1;0.00184794!10014-101C5;0.000395207!10070-101I7;5.29412e-05!10452-106G2;0.000380711!10453-106G3;0.0156064!10449-106F8;0.0422503!10042-101F6;0.0357176!10069-101I6;0.0299777!10193-103E4;9.7115e-05!10631-108I1;0.121739!10438-106E6;0.0226052!10488-107B2;0.00264171!10196-103E7;0.00533696!10071-101I8;3.18777e-05!10071-101I8;0.000459258!10041-101F5;0.667437!10451-106G1;0.000360877!10450-106F9;0.000243403!10604-108F1;0.00180235!10605-108F2;0.0339159!10606-108F3;0.0194438!10603-108E9;0.0146019!10497-107C2;0.011601!10448-106F7;0.0018102!10643-109A4;0.00274693!10426-106D3;0.0373758!10431-106D8;0.0013466!10197-103E8;0.000221609!10443-106F2;0.000108499!10815-111B5;0.0121271!10816-111B6;0.00139441!10817-111B7;0.000950133!10015-101C6;0.000904326!10410-106B5;5.57555e-05!10054-101G9;0.000197395!10758-110E2;0.00159445!10711-109H9;0.0727634!10040-101F4;0.0032353!10470-106I2;0.241404!10415-106C1;0.000538615!10198-103E9;0.0049668!10614-108G2;7.71889e-05!10612-108F9;0.0160224!10549-107H9;0.000225682!10615-108G3;0.000722145!10487-107B1;0.00229208!10433-106E1;0.0218434!10688-109F4;0.0113164!10444-106F3;0.0102886!10444-106F3;0.0784715!10485-107A8;0.0625797!10413-106B8;0.00174695!10175-103C4;0.0101531!10161-103A8;0.0632341!12131-128D7;0.0534709!10624-108H3;0.0307156!10712-109I1;0.422634!10205-103F7;0.0661364!10206-103F8;0.000372411!10207-103F9;0.000160458!10050-101G5;0.0109175!10051-101G6;0.000231195!10016-101C7;1.59064e-05!10046-101G1;3.01933e-05!10778-110G4;0.000560538!10633-108I3;0.0656557!10818-111B8;0.00423287!10819-111B9;0.0260499!10820-111C1;0.0256986!10484-107A7;0.0275981!10808-111A7;0.00139084!10169-103B7;0.0247794!10153-102I9;0.128986!13425-144D5;0.145747!13433-144E4;0.000431887!13437-144E8;6.55748e-06!11904-125F5;2.16815e-05!11905-125F6;0.0428633!10039-101F3;0.050004!10791-110H8;0.203105!10017-101C8;0.00206186!10045-101F9;2.01666e-05!10509-107D5;0.00249638!10839-111E2;0.000327771!10692-109F8;0.00105944!10079-102A7;2.45221e-05!10078-102A6;0.000529452!10721-110A1;4.584e-05!10569-108B2;0.00436265!10570-108B3;0.175336!10571-108B4;0.0893751!10647-109A8;0.186273!10752-110D5;0.00104607!10782-110G8;0.0326724!10726-110A6;0.574601!10018-101C9;0.0139217!10086-102B5;4.36149e-05!10182-103D2;0.000238082!10165-103B3;0.0520011!10499-107C4;0.0496058!10408-106B3;5.32231e-05!10019-101D1;0.050728!10068-101I5;0.000358495!10075-102A3;0.00665712!10077-102A5;0.000188809!10727-110A7;0.000703028!10775-110G1;0.0277144!10412-106B7;0.0204208!12231-129F8;0.0178753!12232-129F9;0.118116!12233-129G1;0.0432061!12234-129G2;0.0672502!10414-106B9;0.51608!10170-103B8;5.76467e-05!10183-103D3;0.216645!10150-102I6;0.185647!10174-103C3;0.20198!10155-103A2;0.00537949!10038-101F2;0.0208704!10838-111E1;0.0134874!10759-110E3;0.00128832!10514-107E1;0.0204807!10465-106H6;0.00496253!10691-109F7;0.0015645!10843-111E6;0.0341861!10844-111E7;0.0058611!11747-123G1;0.0458579!11748-123G2;0.533737!11749-123G3;0.814782!11750-123G4;0.338405!11751-123G5;0.459164!11840-124H4;0.123207!11752-123G6;0.0863865!11753-123G7;0.968656!11754-123G8;0.260134!11755-123G9;0.317878!11756-123H1;0.928546!11833-124G6;0.979305!11760-123H5;0.560693!11836-124G9;0.847405!11758-123H3;0.0519079!11835-124G8;0.124866!11762-123H7;0.0368013!11838-124H2;0.106164!11757-123H2;0.0791119!11759-123H4;0.223527!11761-123H6;0.440106!11842-124H6;0.350333!11837-124H1;0.568974!10568-108B1;0.0227474!13230-141I8;0.180411!13231-141I9;0.019397!10696-109G3;0.0304584!10493-107B7;0.46294!10494-107B8;0.00031923!10850-111F4;0.0192352!10851-111F5;0.0477719!10852-111F6;0.0139682!10853-111F7;0.271153!10854-111F8;0.00693454!10855-111F9;0.000774989!10856-111G1;0.822245!10847-111F1;0.0434838!10846-111E9;0.034792!10848-111F2;0.0123473!10845-111E8;0.0256664!10857-111G2;0.00049481!10858-111G3;0.125278!10156-103A3;0.002796!11901-125F2;0.168141!11902-125F3;0.06504!11903-125F4;0.00496984!10689-109F5;0.0380849!10648-109A9;0.00300999!10784-110H1;0.00100217!10744-110C6;0.00192801!10772-110F7;0.0936867!10474-106I6;0.0936612!10600-108E6;0.236188!10684-109E9;0.01157!12226-129F3;5.46065e-06!12227-129F4;0.0328069!10508-107D4;0.349825!10539-107G8;0.0797318!10607-108F4;0.256038!10555-107I6;0.00053228!10774-110F9;0.0662974!10637-108I7;0.000764612!10663-109C6;0.00130493!10728-110A8;0.00237167!10729-110A9;0.000376639!10430-106D7;0.0346786!10730-110B1;0.000830324!10813-111B3;0.00155846!10812-111B2;0.142232!10037-101F1;0.0622969!10172-103C1;0.179494!10163-103B1;0.307805!10076-102A4;0.177997!10073-102A1;0.222855!10036-101E9;0.98096!10195-103E6;0.211267!10277-104E7;0.166259!10434-106E2;0.0758306!10550-107I1;0.00026216!10545-107H5;0.000872349!10544-107H4;0.0444535!10704-109H2;0.00365335!10510-107D6;0.246042!10558-107I9;0.00581976!10020-101D2;0.122649!10732-110B3;0.00159647!10049-101G4;0.239755!10698-109G5;0.203697!10437-106E5;0.00975498!10417-106C3;0.0039842!10035-101E8;0.0516965!10171-103B9;0.235027!10157-103A4;0.255358!10034-101E7;0.202772!10072-101I9;0.219989!10199-103F1;0.864935!10200-103F2;0.000545209!10697-109G4;8.56968e-05!10723-110A3;0.000100015!10179-103C8;0.019937!10160-103A7;0.338829!10180-103C9;0.345747!10162-103A9;0.500876!10021-101D3;0.530421!10840-111E3;8.75198e-06!10706-109H4;0.0154139!10033-101E6;0.556082!10032-101E5;0.0716756!10490-107B4;0.187449!10439-106E7;0.000160282!10022-101D4;0.000432524!10176-103C5;0.000263238!10469-106I1;0.308795!10067-101I4;0.000516465!10411-106B6;0.0118175!10471-106I3;0.0427887!10030-101E3;0.0322506!10475-106I7;0.00372468!10787-110H4;0.00060661!10477-106I9;0.00157874!10695-109G2;0.348397!11771-123I7;0.55134!11772-123I8;0.0535145!11773-123I9;0.873561!10093-102C3;0.574949!10442-106F1;0.00106827!10442-106F1;8.51213e-05!10201-103F3;1.66161e-06!10639-108I9;3.39056e-05!11843-124H7;0.0616288!11841-124H5;0.000422583!10693-109F9;0.000451031!10436-106E4;0.000330322!10483-107A6;0.0401426!10282-104F3;0.0715088!10023-101D5;7.66894e-06!10066-101I3;8.31653e-05!10065-101I2;0.00107049!10800-110I8;0.000763077!10610-108F7;0.000792825!10841-111E4;0.0121596!10541-107H1;1.37409e-05!10842-111E5;0.00123872!10562-108A4;0.000733962!10024-101D6;0.00674093!10064-101I1;1.52922e-05!10609-108F6;0.000679381!10048-101G3;0.0032156!10781-110G7;0.000407928!10181-103D1;0.00160503!10159-103A6;0.00758327!10056-101H2;0.0155856!10737-110B8;0.0152242!10025-101D7;0.149693!10044-101F8;3.55986e-05!10424-106D1;0.000187173!10463-106H4;0.00648216!10616-108G4;0.000418921!10486-107A9;0.00957301!10062-101H8;0.00712476!10202-103F4;0.000279903!10158-103A5;0.000158835!10441-106E9;0.0122181!10031-101E4;0.000790011!10063-101H9;0.14086!10063-101H9;0.883227!11763-123H8;7.17573e-05!11765-123I1;0.0404291!11768-123I4;0.0295755!10807-111A6;0.00458986!10790-110H7;0.000653019!10798-110I6;0.00165475!10786-110H3;0.156989!10591-108D6;5.22805e-05!10593-108D8;0.00112619!10590-108D5;0.00161829!10026-101D8;0.00116555!10096-102C6;0.00058188!10168-103B6;0.0903517!10154-103A1;0.0357478!10209-103G2;0.0602388!10061-101H7;9.20173e-05!10027-101D9;0.00113408!10043-101F7;0.855326!10783-110G9;0.105441!10028-101E1;0.0126114!10060-101H6;0.0188769!10203-103F5;0.00934493!10059-101H5;0.000169384!10047-101G2;8.58228e-05!10029-101E2;3.12877e-05!10058-101H4;0.000448796!10418-106C4;0.000479145!10492-107B6;0.0032701!10694-109G1;1.97476e-05!10797-110I5;0.458865!10057-101H3;0.00105285!10100-102D1;3.39109e-05!10055-101H1;0.00167946!10204-103F6;0.00518302!10191-103E2;0.00842518!10563-108A5;0.000154609
|name=CNhs12856_bu_f2
|name=CNhs12856_bu_f2
|tomtom_result=ESR1#MA0112.2;9;0.00174165;0.829025;0.85778;10;CACCCTGCCA;GGCCCAGGTCACCCTGACCT;+!SP1#MA0079.1;-1;0.00180206;0.85778;0.85778;9;CACCCTGCCA;ACCCCGCCCC;-!Hand1::Tcfe2a#MA0092.1;-1;0.00496723;2.3644;1;9;CACCCTGCCA;GGTCTGGCAT;+!INSM1#MA0155.1;2;0.00942458;4.4861;1;10;CACCCTGCCA;CGCCCCCTGACA;-!SOK2#MA0385.1;-1;0.0102811;4.89379;1;9;CACCCTGCCA;TGCCTGCAGGT;-!NRG1#MA0347.1;7;0.0112745;5.36668;1;10;CACCCTGCCA;TGCGATGGACCCTGATCTAG;-!CHA4#MA0283.1;-1;0.0150776;7.17694;1;8;CACCCTGCCA;TCTCCGCC;-!NDT80#MA0343.1;0;0.0165623;7.88367;1;10;CACCCTGCCA;TTTCCGGCCACAAAAACGCAA;+!Tal1::Gata1#MA0140.1;7;0.0170619;8.12144;1;10;CACCCTGCCA;CTTATCTGTCCCCACCAG;-!TLX1::NFIC#MA0119.1;4;0.019974;9.50763;1;10;CACCCTGCCA;TTGGCATGGTGCCA;-
}}
}}

Latest revision as of 12:39, 7 September 2012

Full Name: CNhs12856_bu_f2

Motif matrix
POACGT
1656.4373942051008795.247839250446746.8994132301991224.4473464994483
2913.5665933666859257.1353648405635363.9345162975018888.3955186804434
3135.112826389787161358.5710237458086803.9737600112467125.37438303835593
4629.53331315323911176.527287185276790.38077620206624526.5906166446132
52.2810408272701822412.47408311886972.2810408272701825.9958284117826555
60.00.00.02423.031993185193
71.5791924645886441.5791924645886442418.2944157914271.579192464588644
8180.134251331611153.1100514463258830.2831763179095259.50451408935174
9596.01922434658211516.87754460487840.94612708194491269.1890971517955
10918.8701469962934616.5668313165046128.12530599841023759.4697088739867

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ESR1#MA0112.290.001741650.8290250.8577810CACCCTGCCAGGCCCAGGTCACCCTGACCT+
SP1#MA0079.1-10.001802060.857780.857789CACCCTGCCAACCCCGCCCC-
Hand1::Tcfe2a#MA0092.1-10.004967232.364419CACCCTGCCAGGTCTGGCAT+
INSM1#MA0155.120.009424584.4861110CACCCTGCCACGCCCCCTGACA-
SOK2#MA0385.1-10.01028114.8937919CACCCTGCCATGCCTGCAGGT-
NRG1#MA0347.170.01127455.36668110CACCCTGCCATGCGATGGACCCTGATCTAG-
CHA4#MA0283.1-10.01507767.1769418CACCCTGCCATCTCCGCC-
NDT80#MA0343.100.01656237.88367110CACCCTGCCATTTCCGGCCACAAAAACGCAA+
Tal1::Gata1#MA0140.170.01706198.12144110CACCCTGCCACTTATCTGTCCCCACCAG-
TLX1::NFIC#MA0119.140.0199749.50763110CACCCTGCCATTGGCATGGTGCCA-
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