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MacroAPE 1083:Motif324: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;5259;152244;7580;10757!02;2175;168889;787;3989!03;13561;11937;5371;144971!04;8396;45247;94756;27441!05;3158;162518;4300;5864!06;2303;172595...")
 
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.961289!10788-110H5;0.758926!10792-110H9;0.529626!10765-110E9;0.785162!10829-111D1;0.963835!10830-111D2;0.859054!10831-111D3;0.801099!10832-111D4;0.861502!10833-111D5;0.926414!10764-110E8;0.821979!10770-110F5;0.931006!10399-106A3;0.713422!10400-106A4;0.889346!10405-106A9;0.805592!10834-111D6;0.840839!10835-111D7;0.7917!10836-111D8;0.490193!10837-111D9;0.631814!10699-109G6;0.694971!10802-111A1;0.502631!10796-110I4;0.638709!10010-101C1;0.311753!10810-111A9;0.80936!10421-106C7;0.133999!10708-109H6;0.892628!12235-129G3;0.269096!12236-129G4;0.803351!12237-129G5;0.450811!10167-103B5;0.789636!10151-102I7;0.833322!10428-106D5;0.781428!10795-110I3;0.598013!10805-111A4;0.316355!10052-101G7;0.147566!10189-103D9;0.492347!10589-108D4;0.29649!10425-106D2;0.355484!10427-106D4;0.0778046!10702-109G9;0.249038!10432-106D9;0.417075!10496-107C1;0.377037!10718-109I7;0.423823!10011-101C2;0.977934!10053-101G8;0.515439!10686-109F2;0.0878805!10084-102B3;0.284455!10012-101C3;0.753648!10085-102B4;0.716941!10482-107A5;0.846191!10419-106C5;0.536441!10080-102A8;0.462884!10760-110E4;0.819678!10709-109H7;0.707481!10710-109H8;0.755276!10703-109H1;0.723149!10719-109I8;0.409023!10642-109A3;0.175421!10177-103C6;0.477975!10164-103B2;0.989146!10173-103C2;0.726836!10166-103B4;0.775944!10083-102B2;0.997748!10188-103D8;0.975193!10552-107I3;0.748121!10553-107I4;0.489177!10013-101C4;0.781625!10536-107G5;0.482965!10618-108G6;0.843086!10423-106C9;0.247662!10785-110H2;0.211768!12238-129G6;0.18458!12239-129G7;0.60487!12240-129G8;0.36118!10416-106C2;0.144349!10801-110I9;0.998071!10766-110F1;0.733336!10824-111C5;0.779095!10825-111C6;0.556137!10826-111C7;0.535033!10454-106G4;0.557376!10409-106B4;0.483394!10638-108I8;0.447154!10636-108I6;0.16587!10513-107D9;0.534184!10420-106C6;0.188192!10082-102B1;0.328496!10014-101C5;0.21959!10070-101I7;0.526592!10452-106G2;0.469644!10453-106G3;0.106176!10449-106F8;0.231441!10042-101F6;0.259922!10069-101I6;0.769823!10193-103E4;0.562354!10631-108I1;0.869854!10438-106E6;0.830564!10488-107B2;0.804734!10196-103E7;0.30361!10071-101I8;0.594763!10071-101I8;0.500222!10041-101F5;0.934532!10451-106G1;0.325943!10450-106F9;0.180655!10604-108F1;0.224304!10605-108F2;0.154279!10606-108F3;0.195879!10603-108E9;0.245066!10497-107C2;0.141954!10448-106F7;0.198652!10643-109A4;0.465843!10426-106D3;0.931586!10431-106D8;0.672095!10197-103E8;0.517804!10443-106F2;0.652871!10815-111B5;0.0312277!10816-111B6;0.552709!10817-111B7;0.459501!10015-101C6;0.58704!10410-106B5;0.497454!10054-101G9;0.0932835!10758-110E2;0.428287!10711-109H9;0.584057!10040-101F4;0.561894!10470-106I2;0.775443!10415-106C1;0.536201!10198-103E9;0.760801!10614-108G2;0.416884!10612-108F9;0.48727!10549-107H9;0.209273!10615-108G3;0.24506!10487-107B1;0.313616!10433-106E1;0.414335!10688-109F4;0.0254147!10444-106F3;0.63254!10444-106F3;0.56798!10485-107A8;0.678294!10413-106B8;0.696485!10175-103C4;0.114709!10161-103A8;0.949937!12131-128D7;0.871751!10624-108H3;0.731234!10712-109I1;0.736521!10205-103F7;0.754973!10206-103F8;0.862195!10207-103F9;0.971455!10050-101G5;0.709246!10051-101G6;0.853407!10016-101C7;0.935661!10046-101G1;0.913311!10778-110G4;0.997992!10633-108I3;0.50959!10818-111B8;0.230986!10819-111B9;0.488157!10820-111C1;0.430355!10484-107A7;0.439541!10808-111A7;0.118324!10169-103B7;0.461101!10153-102I9;0.823342!13425-144D5;0.770935!13433-144E4;0.0525277!13437-144E8;0.0468174!11904-125F5;0.0680805!11905-125F6;0.345852!10039-101F3;0.817855!10791-110H8;0.705576!10017-101C8;0.804842!10045-101F9;0.872771!10509-107D5;0.611766!10839-111E2;0.114989!10692-109F8;0.815196!10079-102A7;0.329516!10078-102A6;0.671771!10721-110A1;0.98047!10569-108B2;0.573546!10570-108B3;0.98299!10571-108B4;0.456436!10647-109A8;0.856471!10752-110D5;0.00198255!10782-110G8;0.778289!10726-110A6;0.603132!10018-101C9;0.418743!10086-102B5;0.886885!10182-103D2;0.980651!10165-103B3;0.923759!10499-107C4;0.736788!10408-106B3;0.823391!10019-101D1;0.936552!10068-101I5;0.408557!10075-102A3;0.584706!10077-102A5;0.215828!10727-110A7;0.0930841!10775-110G1;0.532917!10412-106B7;0.683013!12231-129F8;0.991971!12232-129F9;0.123369!12233-129G1;0.129108!12234-129G2;0.0894469!10414-106B9;0.0915107!10170-103B8;0.508835!10183-103D3;0.871972!10150-102I6;0.901946!10174-103C3;0.74381!10155-103A2;0.994333!10038-101F2;0.696394!10838-111E1;0.582599!10759-110E3;0.0834866!10514-107E1;0.651093!10465-106H6;0.12237!10691-109F7;0.0437432!10843-111E6;0.241933!10844-111E7;0.415671!11747-123G1;0.410272!11748-123G2;0.27968!11749-123G3;0.295458!11750-123G4;0.294313!11751-123G5;0.684126!11840-124H4;0.492597!11752-123G6;0.934903!11753-123G7;0.979333!11754-123G8;0.646788!11755-123G9;0.162693!11756-123H1;0.222333!11833-124G6;0.455307!11760-123H5;0.839884!11836-124G9;0.384519!11758-123H3;0.744593!11835-124G8;0.354093!11762-123H7;0.612163!11838-124H2;0.177105!11757-123H2;0.430947!11759-123H4;0.749425!11761-123H6;0.296235!11842-124H6;0.228684!11837-124H1;0.707415!10568-108B1;0.543684!13230-141I8;0.79762!13231-141I9;0.964025!10696-109G3;0.836007!10493-107B7;0.264778!10494-107B8;0.345993!10850-111F4;0.728783!10851-111F5;0.682731!10852-111F6;0.648916!10853-111F7;0.13482!10854-111F8;0.411075!10855-111F9;0.303884!10856-111G1;0.76844!10847-111F1;0.494011!10846-111E9;0.722464!10848-111F2;0.36649!10845-111E8;0.510985!10857-111G2;0.167087!10858-111G3;0.567264!10156-103A3;0.575974!11901-125F2;0.749077!11902-125F3;0.29492!11903-125F4;0.264431!10689-109F5;0.148006!10648-109A9;0.276725!10784-110H1;0.0765705!10744-110C6;0.561397!10772-110F7;0.411689!10474-106I6;0.916646!10600-108E6;0.641649!10684-109E9;0.114924!12226-129F3;0.534329!12227-129F4;0.547265!10508-107D4;0.470248!10539-107G8;0.64126!10607-108F4;0.597548!10555-107I6;0.378664!10774-110F9;0.652994!10637-108I7;0.213637!10663-109C6;0.487612!10728-110A8;0.275045!10729-110A9;0.131655!10430-106D7;0.387818!10730-110B1;0.55999!10813-111B3;0.421529!10812-111B2;0.211593!10037-101F1;0.285022!10172-103C1;0.726502!10163-103B1;0.981793!10076-102A4;0.756055!10073-102A1;0.798934!10036-101E9;0.940613!10195-103E6;0.663977!10277-104E7;0.801504!10434-106E2;0.814488!10550-107I1;0.851537!10545-107H5;0.331232!10544-107H4;0.96005!10704-109H2;0.967564!10510-107D6;0.281172!10558-107I9;0.308237!10020-101D2;0.509343!10732-110B3;0.770532!10049-101G4;0.663838!10698-109G5;0.749802!10437-106E5;0.10816!10417-106C3;0.997109!10035-101E8;0.666284!10171-103B9;0.772316!10157-103A4;0.930888!10034-101E7;0.807235!10072-101I9;0.726141!10199-103F1;0.950347!10200-103F2;0.251231!10697-109G4;0.506149!10723-110A3;0.310631!10179-103C8;0.699122!10160-103A7;0.990489!10180-103C9;0.988625!10162-103A9;0.960244!10021-101D3;0.697051!10840-111E3;0.0291547!10706-109H4;0.286356!10033-101E6;0.992852!10032-101E5;0.796798!10490-107B4;0.725645!10439-106E7;0.479632!10022-101D4;0.25526!10176-103C5;0.577237!10469-106I1;0.883483!10067-101I4;0.210092!10411-106B6;0.52839!10471-106I3;0.74911!10030-101E3;0.078543!10475-106I7;0.304438!10787-110H4;0.259084!10477-106I9;0.373679!10695-109G2;0.217362!11771-123I7;0.772802!11772-123I8;0.613335!11773-123I9;0.463115!10093-102C3;0.622551!10442-106F1;0.34003!10442-106F1;0.233689!10201-103F3;0.201047!10639-108I9;0.469169!11843-124H7;0.898407!11841-124H5;0.278291!10693-109F9;0.288363!10436-106E4;0.625961!10483-107A6;0.944347!10282-104F3;0.916994!10023-101D5;0.435767!10066-101I3;0.796446!10065-101I2;0.507988!10800-110I8;0.416729!10610-108F7;0.331175!10841-111E4;0.135422!10541-107H1;0.213015!10842-111E5;0.255748!10562-108A4;0.227841!10024-101D6;0.635105!10064-101I1;0.552146!10609-108F6;0.288166!10048-101G3;0.472137!10781-110G7;0.760079!10181-103D1;0.757339!10159-103A6;0.856789!10056-101H2;0.720386!10737-110B8;0.653572!10025-101D7;0.473189!10044-101F8;0.343605!10424-106D1;0.253252!10463-106H4;0.325262!10616-108G4;0.477665!10486-107A9;0.424332!10062-101H8;0.538123!10202-103F4;0.622053!10158-103A5;0.424616!10441-106E9;0.891615!10031-101E4;0.402918!10063-101H9;0.673993!10063-101H9;0.880254!11763-123H8;0.413795!11765-123I1;0.210237!11768-123I4;0.369878!10807-111A6;0.211665!10790-110H7;0.136216!10798-110I6;0.101521!10786-110H3;0.0476637!10591-108D6;0.405456!10593-108D8;0.0333287!10590-108D5;0.411956!10026-101D8;0.137558!10096-102C6;0.869582!10168-103B6;0.244254!10154-103A1;0.904436!10209-103G2;0.853957!10061-101H7;0.383452!10027-101D9;0.524792!10043-101F7;0.652975!10783-110G9;0.434458!10028-101E1;0.480361!10060-101H6;0.787113!10203-103F5;0.690343!10059-101H5;0.546641!10047-101G2;0.384393!10029-101E2;0.0888895!10058-101H4;0.361121!10418-106C4;0.471846!10492-107B6;0.489816!10694-109G1;0.0771036!10797-110I5;0.561425!10057-101H3;0.412573!10100-102D1;0.510277!10055-101H1;0.558126!10204-103F6;0.568049!10191-103E2;0.854197!10563-108A5;0.359271
|name=motif324
|name=motif324
|tomtom_result=SP1#MA0079.2;2;0.000656137;0.312321;0.624642;8;CCTGCCTC;ACCCCGCCCC;-!SP1#MA0079.2;1;0.00195905;0.93251;0.93251;8;CCTGCCTC;CCCCGCCCCC;+!Klf4#MA0039.1;0;0.00491742;2.34069;1;8;CCTGCCTC;CCTTCCTTTA;-!SPI1#MA0080.2;0;0.0151805;7.22592;1;7;CCTGCCTC;ACTTCCT;-!PHD1#MA0355.1;1;0.0172921;8.23102;1;8;CCTGCCTC;ACCTGCAGCA;+!EWSR1-FLI1#MA0149.1;0;0.0179347;8.53689;1;8;CCTGCCTC;CCTTCCTTCCTTCCTTCC;-!GCR2#MA0305.1;0;0.0187147;8.9082;1;7;CCTGCCTC;GCTTCCT;+
}}
}}

Latest revision as of 12:41, 7 September 2012

Full Name: motif324

Motif matrix
POACGT
015259152244758010757
0221751688897873989
0313561119375371144971
048396452479475627441
05315816251843005864
0623031725959420
0713262265857912128081
08325915648187107390

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.220.0006561370.3123210.6246428CCTGCCTCACCCCGCCCC-
SP1#MA0079.210.001959050.932510.932518CCTGCCTCCCCCGCCCCC+
Klf4#MA0039.100.004917422.3406918CCTGCCTCCCTTCCTTTA-
SPI1#MA0080.200.01518057.2259217CCTGCCTCACTTCCT-
PHD1#MA0355.110.01729218.2310218CCTGCCTCACCTGCAGCA+
EWSR1-FLI1#MA0149.100.01793478.5368918CCTGCCTCCCTTCCTTCCTTCCTTCC-
GCR2#MA0305.100.01871478.908217CCTGCCTCGCTTCCT+
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