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MacroAPE 1083:Motif CCNAGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;65264;0;0!02;0;65264;0;0!03;16316;16316;16316;16316!04;65264;0;0;0!05;0;0;65264;0!06;0;0;0;65264 |macroape_1083_sample_pvalues=11376-118...")
 
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756!10788-110H5;0.596272!10792-110H9;0.477011!10765-110E9;0.348728!10829-111D1;0.367069!10830-111D2;0.08044!10831-111D3;0.500842!10832-111D4;0.242895!10833-111D5;0.214208!10764-110E8;0.257268!10770-110F5;0.330131!10399-106A3;0.221827!10400-106A4;0.442935!10405-106A9;0.513654!10834-111D6;0.439335!10835-111D7;0.181416!10836-111D8;0.144667!10837-111D9;0.291196!10699-109G6;0.201755!10802-111A1;0.20776!10796-110I4;0.174275!10010-101C1;0.704563!10810-111A9;0.0607819!10421-106C7;0.102028!10708-109H6;0.136527!12235-129G3;0.538585!12236-129G4;0.834667!12237-129G5;0.706631!10167-103B5;0.694531!10151-102I7;0.718997!10428-106D5;0.841856!10795-110I3;0.457056!10805-111A4;0.0679598!10052-101G7;0.142157!10189-103D9;0.285466!10589-108D4;0.157731!10425-106D2;0.0265899!10427-106D4;0.53885!10702-109G9;0.471762!10432-106D9;0.506808!10496-107C1;0.390221!10718-109I7;0.750198!10011-101C2;0.0989007!10053-101G8;0.144515!10686-109F2;0.44012!10084-102B3;0.217762!10012-101C3;0.702332!10085-102B4;0.935183!10482-107A5;0.571423!10419-106C5;0.492613!10080-102A8;0.450311!10760-110E4;0.0138683!10709-109H7;0.0589994!10710-109H8;0.545637!10703-109H1;0.227449!10719-109I8;0.239471!10642-109A3;0.374163!10177-103C6;0.345789!10164-103B2;0.918993!10173-103C2;0.85476!10166-103B4;0.834766!10083-102B2;0.980698!10188-103D8;0.641734!10552-107I3;0.928595!10553-107I4;0.223641!10013-101C4;0.71081!10536-107G5;0.245605!10618-108G6;0.452071!10423-106C9;0.0915865!10785-110H2;0.114859!12238-129G6;0.112071!12239-129G7;0.740432!12240-129G8;0.632746!10416-106C2;0.404551!10801-110I9;0.0845274!10766-110F1;0.257597!10824-111C5;0.330176!10825-111C6;0.270432!10826-111C7;0.389993!10454-106G4;0.491932!10409-106B4;0.252393!10638-108I8;0.456075!10636-108I6;0.234347!10513-107D9;0.441308!10420-106C6;0.196368!10082-102B1;0.914028!10014-101C5;0.339305!10070-101I7;0.124613!10452-106G2;0.124495!10453-106G3;0.804154!10449-106F8;0.598972!10042-101F6;0.596711!10069-101I6;0.579007!10193-103E4;0.370153!10631-108I1;0.914673!10438-106E6;0.068312!10488-107B2;0.351409!10196-103E7;0.273662!10071-101I8;0.254612!10071-101I8;0.419452!10041-101F5;0.854408!10451-106G1;0.25447!10450-106F9;0.254959!10604-108F1;0.2883!10605-108F2;0.439545!10606-108F3;0.612813!10603-108E9;0.73082!10497-107C2;0.43321!10448-106F7;0.708985!10643-109A4;0.381442!10426-106D3;0.461497!10431-106D8;0.742398!10197-103E8;0.22845!10443-106F2;0.561192!10815-111B5;0.300429!10816-111B6;0.325071!10817-111B7;0.404514!10015-101C6;0.327798!10410-106B5;0.408706!10054-101G9;0.910971!10758-110E2;0.598078!10711-109H9;0.0392548!10040-101F4;0.0786286!10470-106I2;0.917051!10415-106C1;0.545887!10198-103E9;0.979845!10614-108G2;0.381794!10612-108F9;0.625309!10549-107H9;0.652937!10615-108G3;0.389475!10487-107B1;0.447272!10433-106E1;0.327144!10688-109F4;0.954989!10444-106F3;0.320007!10444-106F3;0.587057!10485-107A8;0.602138!10413-106B8;0.934689!10175-103C4;0.487223!10161-103A8;0.954491!12131-128D7;0.615825!10624-108H3;0.827384!10712-109I1;0.483347!10205-103F7;0.328657!10206-103F8;0.370843!10207-103F9;0.428795!10050-101G5;0.10296!10051-101G6;0.879525!10016-101C7;0.543272!10046-101G1;0.27337!10778-110G4;0.253185!10633-108I3;0.653042!10818-111B8;0.71581!10819-111B9;0.539257!10820-111C1;0.572361!10484-107A7;0.597235!10808-111A7;0.763224!10169-103B7;0.0208321!10153-102I9;0.841948!13425-144D5;0.796631!13433-144E4;0.420297!13437-144E8;0.280305!11904-125F5;0.278038!11905-125F6;0.877941!10039-101F3;0.992714!10791-110H8;0.932916!10017-101C8;0.188151!10045-101F9;0.203133!10509-107D5;0.0512906!10839-111E2;0.783461!10692-109F8;0.706551!10079-102A7;0.273442!10078-102A6;0.57763!10721-110A1;0.44819!10569-108B2;0.0934285!10570-108B3;0.902421!10571-108B4;0.947013!10647-109A8;0.827829!10752-110D5;0.449591!10782-110G8;0.189522!10726-110A6;0.823122!10018-101C9;0.580005!10086-102B5;0.85915!10182-103D2;0.541679!10165-103B3;0.716258!10499-107C4;0.674101!10408-106B3;0.496544!10019-101D1;0.912506!10068-101I5;0.0489492!10075-102A3;0.0623241!10077-102A5;0.146021!10727-110A7;0.273852!10775-110G1;0.227519!10412-106B7;0.36194!12231-129F8;0.666806!12232-129F9;0.0241205!12233-129G1;0.000749316!12234-129G2;0.00783538!10414-106B9;0.0186566!10170-103B8;0.842171!10183-103D3;0.651337!10150-102I6;0.799603!10174-103C3;0.919737!10155-103A2;0.608196!10038-101F2;0.581505!10838-111E1;0.565411!10759-110E3;0.81051!10514-107E1;0.493433!10465-106H6;0.9577!10691-109F7;0.478348!10843-111E6;0.397959!10844-111E7;0.335331!11747-123G1;0.455619!11748-123G2;0.658637!11749-123G3;0.708002!11750-123G4;0.903273!11751-123G5;0.577029!11840-124H4;0.627785!11752-123G6;0.705967!11753-123G7;0.374916!11754-123G8;0.646967!11755-123G9;0.979968!11756-123H1;0.694541!11833-124G6;0.517944!11760-123H5;0.280915!11836-124G9;0.798278!11758-123H3;0.863582!11835-124G8;0.936058!11762-123H7;0.508444!11838-124H2;0.695384!11757-123H2;0.617047!11759-123H4;0.730808!11761-123H6;0.687619!11842-124H6;0.925015!11837-124H1;0.477876!10568-108B1;0.445881!13230-141I8;0.652928!13231-141I9;0.814616!10696-109G3;0.757034!10493-107B7;0.445481!10494-107B8;0.700032!10850-111F4;0.888243!10851-111F5;0.245908!10852-111F6;0.516886!10853-111F7;0.256789!10854-111F8;0.301666!10855-111F9;0.896797!10856-111G1;0.580188!10847-111F1;0.471789!10846-111E9;0.952975!10848-111F2;0.410277!10845-111E8;0.289219!10857-111G2;0.946833!10858-111G3;0.686675!10156-103A3;0.54111!11901-125F2;0.90693!11902-125F3;0.64212!11903-125F4;0.887648!10689-109F5;0.935217!10648-109A9;0.192928!10784-110H1;0.577988!10744-110C6;0.398588!10772-110F7;0.41895!10474-106I6;0.248949!10600-108E6;0.185503!10684-109E9;0.743328!12226-129F3;0.778879!12227-129F4;0.358922!10508-107D4;0.60926!10539-107G8;0.271225!10607-108F4;0.30784!10555-107I6;0.473607!10774-110F9;0.19526!10637-108I7;0.113775!10663-109C6;0.694722!10728-110A8;0.442318!10729-110A9;0.688936!10430-106D7;0.975481!10730-110B1;0.523425!10813-111B3;0.037212!10812-111B2;0.615885!10037-101F1;0.204133!10172-103C1;0.992139!10163-103B1;0.783089!10076-102A4;0.802115!10073-102A1;0.711518!10036-101E9;0.759638!10195-103E6;0.887568!10277-104E7;0.915887!10434-106E2;0.606071!10550-107I1;0.534591!10545-107H5;0.227903!10544-107H4;0.163743!10704-109H2;0.13568!10510-107D6;0.64288!10558-107I9;0.704809!10020-101D2;0.986407!10732-110B3;0.113026!10049-101G4;0.141488!10698-109G5;0.926454!10437-106E5;0.132051!10417-106C3;0.643969!10035-101E8;0.703163!10171-103B9;0.930629!10157-103A4;0.774941!10034-101E7;0.892505!10072-101I9;0.975289!10199-103F1;0.955232!10200-103F2;0.707847!10697-109G4;0.498955!10723-110A3;0.584251!10179-103C8;0.995157!10160-103A7;0.981108!10180-103C9;0.833877!10162-103A9;0.573103!10021-101D3;0.79795!10840-111E3;0.225132!10706-109H4;0.27043!10033-101E6;0.940892!10032-101E5;0.862847!10490-107B4;0.872284!10439-106E7;0.224557!10022-101D4;0.706013!10176-103C5;0.273373!10469-106I1;0.900794!10067-101I4;0.972735!10411-106B6;0.325728!10471-106I3;0.945108!10030-101E3;0.765252!10475-106I7;0.376458!10787-110H4;0.340733!10477-106I9;0.273126!10695-109G2;0.778434!11771-123I7;0.525632!11772-123I8;0.73617!11773-123I9;0.850064!10093-102C3;0.364303!10442-106F1;0.546968!10442-106F1;0.710504!10201-103F3;0.561075!10639-108I9;0.43621!11843-124H7;0.725565!11841-124H5;0.790754!10693-109F9;0.184926!10436-106E4;0.0751351!10483-107A6;0.912382!10282-104F3;0.933544!10023-101D5;0.557712!10066-101I3;0.159505!10065-101I2;0.436624!10800-110I8;0.510415!10610-108F7;0.130015!10841-111E4;0.201415!10541-107H1;0.345393!10842-111E5;0.845851!10562-108A4;0.315705!10024-101D6;0.532666!10064-101I1;0.143301!10609-108F6;0.381788!10048-101G3;0.197867!10781-110G7;0.314697!10181-103D1;0.371045!10159-103A6;0.637104!10056-101H2;0.5133!10737-110B8;0.68945!10025-101D7;0.58226!10044-101F8;0.0901058!10424-106D1;0.050362!10463-106H4;0.152213!10616-108G4;0.561284!10486-107A9;0.125207!10062-101H8;0.467754!10202-103F4;0.102588!10158-103A5;0.571946!10441-106E9;0.564006!10031-101E4;0.989925!10063-101H9;0.86271!10063-101H9;0.790924!11763-123H8;0.459226!11765-123I1;0.710063!11768-123I4;0.79494!10807-111A6;0.961277!10790-110H7;0.369802!10798-110I6;0.575243!10786-110H3;0.512734!10591-108D6;0.223604!10593-108D8;0.262922!10590-108D5;0.591784!10026-101D8;0.287279!10096-102C6;0.381976!10168-103B6;0.349712!10154-103A1;0.803509!10209-103G2;0.683061!10061-101H7;0.581825!10027-101D9;0.413211!10043-101F7;0.506392!10783-110G9;0.109144!10028-101E1;0.300538!10060-101H6;0.137028!10203-103F5;0.120044!10059-101H5;0.655209!10047-101G2;0.651665!10029-101E2;0.555957!10058-101H4;0.423776!10418-106C4;0.592444!10492-107B6;0.893754!10694-109G1;0.491713!10797-110I5;0.8813!10057-101H3;0.678654!10100-102D1;0.634369!10055-101H1;0.139944!10204-103F6;0.423567!10191-103E2;0.100225!10563-108A5;0.407342
|name=motif_CCNAGT
|name=motif_CCNAGT
|tomtom_result=RORA_2#MA0072.1;4;0.0172839;8.22713;1;6;CCAAGT;TTGACCTACTTATA;-!FOXC1#MA0032.1;1;0.0195976;9.32844;1;6;CCAAGT;GGTAAGTA;+!RIM101#MA0368.1;2;0.0203055;9.66544;1;5;CCAAGT;CGCCAAG;+
}}
}}

Latest revision as of 12:50, 7 September 2012

Full Name: motif_CCNAGT

Motif matrix
POACGT
0106526400
0206526400
0316316163161631616316
0465264000
0500652640
0600065264

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RORA_2#MA0072.140.01728398.2271316CCAAGTTTGACCTACTTATA-
FOXC1#MA0032.110.01959769.3284416CCAAGTGGTAAGTA+
RIM101#MA0368.120.02030559.6654415CCAAGTCGCCAAG+
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