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MacroAPE 1083:Motif GNACCT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;7856;0!02;1964;1964;1964;1964!03;7856;0;0;0!04;0;7856;0;0!05;0;7856;0;0!06;0;0;0;7856 |macroape_1083_sample_pvalues=11376-118A8;0.2791...")
 
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0464-106H5;0.494504!10827-111C8;0.844605!10789-110H6;0.521!10828-111C9;0.39293!10788-110H5;0.556669!10792-110H9;0.429149!10765-110E9;0.404414!10829-111D1;0.367799!10830-111D2;0.349596!10831-111D3;0.332188!10832-111D4;0.547222!10833-111D5;0.216866!10764-110E8;0.322781!10770-110F5;0.393561!10399-106A3;0.189464!10400-106A4;0.453138!10405-106A9;0.423548!10834-111D6;0.376325!10835-111D7;0.410756!10836-111D8;0.753127!10837-111D9;0.515259!10699-109G6;0.534001!10802-111A1;0.331598!10796-110I4;0.287087!10010-101C1;0.179181!10810-111A9;0.65263!10421-106C7;0.916689!10708-109H6;0.479684!12235-129G3;0.617526!12236-129G4;0.026166!12237-129G5;0.13178!10167-103B5;0.0742516!10151-102I7;0.840868!10428-106D5;0.800483!10795-110I3;0.968265!10805-111A4;0.755848!10052-101G7;0.680737!10189-103D9;0.336544!10589-108D4;0.156479!10425-106D2;0.35871!10427-106D4;0.321426!10702-109G9;0.640454!10432-106D9;0.517447!10496-107C1;0.0226614!10718-109I7;0.118217!10011-101C2;0.338412!10053-101G8;0.64961!10686-109F2;0.44812!10084-102B3;0.101147!10012-101C3;0.86081!10085-102B4;0.886612!10482-107A5;0.902046!10419-106C5;0.226285!10080-102A8;0.103694!10760-110E4;0.406138!10709-109H7;0.143073!10710-109H8;0.0325691!10703-109H1;0.0302649!10719-109I8;0.728062!10642-109A3;0.0345401!10177-103C6;0.297041!10164-103B2;0.809981!10173-103C2;0.967494!10166-103B4;0.7679!10083-102B2;0.904652!10188-103D8;0.837676!10552-107I3;0.973987!10553-107I4;0.240424!10013-101C4;0.0807234!10536-107G5;0.56069!10618-108G6;0.0649738!10423-106C9;0.190816!10785-110H2;0.321505!12238-129G6;0.0968046!12239-129G7;0.0866862!12240-129G8;0.102416!10416-106C2;0.0941032!10801-110I9;0.825411!10766-110F1;0.434142!10824-111C5;0.50564!10825-111C6;0.699803!10826-111C7;0.750432!10454-106G4;0.67065!10409-106B4;0.609242!10638-108I8;0.393539!10636-108I6;0.101219!10513-107D9;0.0924618!10420-106C6;0.118641!10082-102B1;0.278646!10014-101C5;0.0501777!10070-101I7;0.120959!10452-106G2;0.167853!10453-106G3;0.622312!10449-106F8;0.50627!10042-101F6;0.46652!10069-101I6;0.736405!10193-103E4;0.890807!10631-108I1;0.785347!10438-106E6;0.951762!10488-107B2;0.100963!10196-103E7;0.37953!10071-101I8;0.175307!10071-101I8;0.148545!10041-101F5;0.784827!10451-106G1;0.830365!10450-106F9;0.695342!10604-108F1;0.972316!10605-108F2;0.949641!10606-108F3;0.996571!10603-108E9;0.947713!10497-107C2;0.846896!10448-106F7;0.0220287!10643-109A4;0.204643!10426-106D3;0.027312!10431-106D8;0.0481403!10197-103E8;0.337348!10443-106F2;0.389354!10815-111B5;0.745865!10816-111B6;0.672761!10817-111B7;0.550055!10015-101C6;0.697352!10410-106B5;0.34785!10054-101G9;0.501563!10758-110E2;0.711201!10711-109H9;0.528253!10040-101F4;0.746467!10470-106I2;0.868655!10415-106C1;0.0417761!10198-103E9;0.0193054!10614-108G2;0.209022!10612-108F9;0.0745928!10549-107H9;0.06878!10615-108G3;0.751001!10487-107B1;0.16508!10433-106E1;0.908519!10688-109F4;0.83304!10444-106F3;0.119926!10444-106F3;0.329192!10485-107A8;0.449771!10413-106B8;0.0590187!10175-103C4;0.0118617!10161-103A8;0.622058!12131-128D7;0.60749!10624-108H3;0.327783!10712-109I1;0.177948!10205-103F7;0.620851!10206-103F8;0.771412!10207-103F9;0.821947!10050-101G5;0.391368!10051-101G6;0.294412!10016-101C7;0.943262!10046-101G1;0.632245!10778-110G4;0.748201!10633-108I3;0.448056!10818-111B8;0.920246!10819-111B9;0.214514!10820-111C1;0.21754!10484-107A7;0.199684!10808-111A7;0.218291!10169-103B7;0.430801!10153-102I9;0.764625!13425-144D5;0.817886!13433-144E4;0.222636!13437-144E8;0.24526!11904-125F5;0.206926!11905-125F6;0.982851!10039-101F3;0.770884!10791-110H8;0.884579!10017-101C8;0.130794!10045-101F9;0.116573!10509-107D5;0.189552!10839-111E2;0.809949!10692-109F8;0.227829!10079-102A7;0.0647506!10078-102A6;0.740979!10721-110A1;0.793518!10569-108B2;0.432995!10570-108B3;0.698298!10571-108B4;0.797351!10647-109A8;0.781325!10752-110D5;0.502185!10782-110G8;0.539641!10726-110A6;0.0178632!10018-101C9;0.589889!10086-102B5;0.951998!10182-103D2;0.64998!10165-103B3;0.83006!10499-107C4;0.927861!10408-106B3;0.314597!10019-101D1;0.00390397!10068-101I5;0.135546!10075-102A3;0.418327!10077-102A5;0.0921984!10727-110A7;0.711782!10775-110G1;0.988293!10412-106B7;0.494987!12231-129F8;0.0279728!12232-129F9;0.0284238!12233-129G1;0.018189!12234-129G2;0.0247858!10414-106B9;0.0133895!10170-103B8;0.388053!10183-103D3;0.794333!10150-102I6;0.813086!10174-103C3;0.874914!10155-103A2;0.864531!10038-101F2;0.99521!10838-111E1;0.995878!10759-110E3;0.0618788!10514-107E1;0.876638!10465-106H6;0.0830028!10691-109F7;0.153945!10843-111E6;0.183263!10844-111E7;0.871472!11747-123G1;0.884237!11748-123G2;0.0796228!11749-123G3;0.00944091!11750-123G4;0.165696!11751-123G5;0.0616855!11840-124H4;0.32506!11752-123G6;0.394108!11753-123G7;0.813087!11754-123G8;0.087276!11755-123G9;0.0101548!11756-123H1;0.377643!11833-124G6;0.54787!11760-123H5;0.549752!11836-124G9;0.306873!11758-123H3;0.264499!11835-124G8;0.579995!11762-123H7;0.996372!11838-124H2;0.517653!11757-123H2;0.896544!11759-123H4;0.605126!11761-123H6;0.0762684!11842-124H6;0.600666!11837-124H1;0.640051!10568-108B1;0.642259!13230-141I8;0.107372!13231-141I9;0.257326!10696-109G3;0.236051!10493-107B7;0.152531!10494-107B8;0.814258!10850-111F4;0.0348356!10851-111F5;0.596354!10852-111F6;0.551302!10853-111F7;0.19378!10854-111F8;0.729188!10855-111F9;0.710982!10856-111G1;0.0672243!10847-111F1;0.139375!10846-111E9;0.640348!10848-111F2;0.47776!10845-111E8;0.473509!10857-111G2;0.849457!10858-111G3;0.430413!10156-103A3;0.565435!11901-125F2;0.831854!11902-125F3;0.273731!11903-125F4;0.327246!10689-109F5;0.286867!10648-109A9;0.099123!10784-110H1;0.0647601!10744-110C6;0.0412608!10772-110F7;0.939447!10474-106I6;0.785891!10600-108E6;0.568864!10684-109E9;0.0736101!12226-129F3;0.0211401!12227-129F4;0.0117219!10508-107D4;0.032952!10539-107G8;0.182361!10607-108F4;0.0698711!10555-107I6;0.194786!10774-110F9;0.195714!10637-108I7;0.133493!10663-109C6;0.121661!10728-110A8;0.134074!10729-110A9;0.0363675!10430-106D7;0.323846!10730-110B1;0.845136!10813-111B3;0.306638!10812-111B2;0.105309!10037-101F1;0.491678!10172-103C1;0.904628!10163-103B1;0.744863!10076-102A4;0.869794!10073-102A1;0.830549!10036-101E9;0.722654!10195-103E6;0.948174!10277-104E7;0.856294!10434-106E2;0.437232!10550-107I1;0.025273!10545-107H5;0.409301!10544-107H4;0.0698002!10704-109H2;0.168578!10510-107D6;0.0246568!10558-107I9;0.779181!10020-101D2;0.00121024!10732-110B3;0.890899!10049-101G4;0.0688844!10698-109G5;0.0726675!10437-106E5;0.189496!10417-106C3;0.277916!10035-101E8;0.0178934!10171-103B9;0.912101!10157-103A4;0.81102!10034-101E7;0.848191!10072-101I9;0.911691!10199-103F1;0.668234!10200-103F2;0.0760526!10697-109G4;0.636443!10723-110A3;0.282147!10179-103C8;0.000543763!10160-103A7;0.987329!10180-103C9;0.968676!10162-103A9;0.353824!10021-101D3;0.310704!10840-111E3;0.350781!10706-109H4;0.866181!10033-101E6;0.409176!10032-101E5;0.999905!10490-107B4;0.898201!10439-106E7;0.214248!10022-101D4;0.0866324!10176-103C5;0.355888!10469-106I1;0.806741!10067-101I4;0.20085!10411-106B6;0.415736!10471-106I3;0.406735!10030-101E3;0.601486!10475-106I7;0.774947!10787-110H4;0.519939!10477-106I9;0.386126!10695-109G2;0.0221936!11771-123I7;0.164156!11772-123I8;0.0986593!11773-123I9;0.10263!10093-102C3;0.138967!10442-106F1;0.0183563!10442-106F1;0.451544!10201-103F3;0.481235!10639-108I9;0.250185!11843-124H7;0.0343516!11841-124H5;0.792897!10693-109F9;0.640888!10436-106E4;0.146884!10483-107A6;0.129104!10282-104F3;0.0767847!10023-101D5;0.596358!10066-101I3;0.603322!10065-101I2;0.809169!10800-110I8;0.677887!10610-108F7;0.616105!10841-111E4;0.794575!10541-107H1;0.424341!10842-111E5;0.920517!10562-108A4;0.366633!10024-101D6;0.110261!10064-101I1;0.024931!10609-108F6;0.0874102!10048-101G3;0.0190204!10781-110G7;0.65483!10181-103D1;0.404901!10159-103A6;0.79586!10056-101H2;0.605399!10737-110B8;0.90498!10025-101D7;0.52798!10044-101F8;0.926797!10424-106D1;0.859652!10463-106H4;0.87752!10616-108G4;0.0705079!10486-107A9;0.0177237!10062-101H8;0.341003!10202-103F4;0.272205!10158-103A5;0.0572147!10441-106E9;0.544555!10031-101E4;0.253503!10063-101H9;0.897417!10063-101H9;0.727764!11763-123H8;0.294193!11765-123I1;0.580537!11768-123I4;0.582902!10807-111A6;0.60295!10790-110H7;0.921799!10798-110I6;0.643962!10786-110H3;0.959474!10591-108D6;0.228326!10593-108D8;0.255358!10590-108D5;0.129449!10026-101D8;0.608381!10096-102C6;0.393601!10168-103B6;0.697135!10154-103A1;0.742727!10209-103G2;0.683983!10061-101H7;0.323105!10027-101D9;0.420826!10043-101F7;0.120106!10783-110G9;0.117555!10028-101E1;0.292277!10060-101H6;0.0513563!10203-103F5;0.286739!10059-101H5;0.450609!10047-101G2;0.502072!10029-101E2;0.0625496!10058-101H4;0.119604!10418-106C4;0.377041!10492-107B6;0.0600603!10694-109G1;0.501167!10797-110I5;0.481188!10057-101H3;0.129359!10100-102D1;0.664932!10055-101H1;0.76063!10204-103F6;0.418035!10191-103E2;0.519651!10563-108A5;0.615346
|name=motif_GNACCT
|name=motif_GNACCT
|tomtom_result=ZEB1#MA0103.1;-1;0.0111342;5.2999;1;5;GAACCT;CACCTG;+!NR2F1#MA0017.1;8;0.0126327;6.01319;1;6;GAACCT;TGACCTTTGAACCT;+!sna#MA0086.1;-1;0.0148968;7.09086;1;5;GAACCT;CACCTG;-
}}
}}

Latest revision as of 12:56, 7 September 2012

Full Name: motif_GNACCT

Motif matrix
POACGT
010078560
021964196419641964
037856000
040785600
050785600
060007856

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ZEB1#MA0103.1-10.01113425.299915GAACCTCACCTG+
NR2F1#MA0017.180.01263276.0131916GAACCTTGACCTTTGAACCT+
sna#MA0086.1-10.01489687.0908615GAACCTCACCTG-
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