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MacroAPE 1083:Motif CCANTG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;315904;0;0!02;0;315904;0;0!03;315904;0;0;0!04;78976;78976;78976;78976!05;0;0;0;315904!06;0;0;315904;0 |macroape_1083_sample_pvalues=1137...")
 
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H5;0.807558!10827-111C8;0.748552!10789-110H6;0.913076!10828-111C9;0.74267!10788-110H5;0.742549!10792-110H9;0.905079!10765-110E9;0.920453!10829-111D1;0.613623!10830-111D2;0.876912!10831-111D3;0.548788!10832-111D4;0.973267!10833-111D5;0.936176!10764-110E8;0.878754!10770-110F5;0.822458!10399-106A3;0.795768!10400-106A4;0.934791!10405-106A9;0.800887!10834-111D6;0.939193!10835-111D7;0.534949!10836-111D8;0.848682!10837-111D9;0.807711!10699-109G6;0.915924!10802-111A1;0.741831!10796-110I4;0.903165!10010-101C1;0.602224!10810-111A9;0.553852!10421-106C7;0.795236!10708-109H6;0.596906!12235-129G3;0.617974!12236-129G4;0.558285!12237-129G5;0.952613!10167-103B5;0.125299!10151-102I7;0.945861!10428-106D5;0.944648!10795-110I3;0.556553!10805-111A4;0.569628!10052-101G7;0.712792!10189-103D9;0.960547!10589-108D4;0.884877!10425-106D2;0.735324!10427-106D4;0.113107!10702-109G9;0.720248!10432-106D9;0.101014!10496-107C1;0.731053!10718-109I7;0.476431!10011-101C2;0.844805!10053-101G8;0.868785!10686-109F2;0.330011!10084-102B3;0.234728!10012-101C3;0.815955!10085-102B4;0.9761!10482-107A5;0.323813!10419-106C5;0.630867!10080-102A8;0.523648!10760-110E4;0.769385!10709-109H7;0.985346!10710-109H8;0.366089!10703-109H1;0.664375!10719-109I8;0.230329!10642-109A3;0.34356!10177-103C6;0.435525!10164-103B2;0.764557!10173-103C2;0.920183!10166-103B4;0.988985!10083-102B2;0.999697!10188-103D8;0.970817!10552-107I3;0.947046!10553-107I4;0.456391!10013-101C4;0.0910916!10536-107G5;0.797405!10618-108G6;0.945739!10423-106C9;0.596196!10785-110H2;0.851014!12238-129G6;0.842251!12239-129G7;0.997275!12240-129G8;0.511619!10416-106C2;0.429874!10801-110I9;0.944687!10766-110F1;0.763678!10824-111C5;0.59083!10825-111C6;0.808329!10826-111C7;0.79468!10454-106G4;0.816885!10409-106B4;0.627011!10638-108I8;0.836034!10636-108I6;0.758947!10513-107D9;0.0838575!10420-106C6;0.165666!10082-102B1;0.588598!10014-101C5;0.651134!10070-101I7;0.900975!10452-106G2;0.923461!10453-106G3;0.849879!10449-106F8;0.907206!10042-101F6;0.956841!10069-101I6;0.694325!10193-103E4;0.904989!10631-108I1;0.758612!10438-106E6;0.737767!10488-107B2;0.565933!10196-103E7;0.610991!10071-101I8;0.51819!10071-101I8;0.733871!10041-101F5;0.329332!10451-106G1;0.723833!10450-106F9;0.619809!10604-108F1;0.499659!10605-108F2;0.465594!10606-108F3;0.477786!10603-108E9;0.325224!10497-107C2;0.432783!10448-106F7;0.965199!10643-109A4;0.930455!10426-106D3;0.113983!10431-106D8;0.151526!10197-103E8;0.403803!10443-106F2;0.720913!10815-111B5;0.896355!10816-111B6;0.844605!10817-111B7;0.817524!10015-101C6;0.793226!10410-106B5;0.949303!10054-101G9;0.555872!10758-110E2;0.852333!10711-109H9;0.255859!10040-101F4;0.622606!10470-106I2;0.921723!10415-106C1;0.562328!10198-103E9;0.0410864!10614-108G2;0.912702!10612-108F9;0.669847!10549-107H9;0.412776!10615-108G3;0.829621!10487-107B1;0.342651!10433-106E1;0.32167!10688-109F4;0.199475!10444-106F3;0.890166!10444-106F3;0.928698!10485-107A8;0.985192!10413-106B8;0.643702!10175-103C4;0.598224!10161-103A8;0.746042!12131-128D7;0.774062!10624-108H3;0.72763!10712-109I1;0.915045!10205-103F7;0.541959!10206-103F8;0.516875!10207-103F9;0.397373!10050-101G5;0.244493!10051-101G6;0.965294!10016-101C7;0.591755!10046-101G1;0.479812!10778-110G4;0.753097!10633-108I3;0.208583!10818-111B8;0.149839!10819-111B9;0.400774!10820-111C1;0.401915!10484-107A7;0.369475!10808-111A7;0.549414!10169-103B7;0.639845!10153-102I9;0.927059!13425-144D5;0.913888!13433-144E4;0.0764258!13437-144E8;0.112104!11904-125F5;0.0887482!11905-125F6;0.820069!10039-101F3;0.436641!10791-110H8;0.968121!10017-101C8;0.524505!10045-101F9;0.731646!10509-107D5;0.646525!10839-111E2;0.226755!10692-109F8;0.652059!10079-102A7;0.2915!10078-102A6;0.620459!10721-110A1;0.26331!10569-108B2;0.898208!10570-108B3;0.254571!10571-108B4;0.0534654!10647-109A8;0.327193!10752-110D5;0.754988!10782-110G8;0.821277!10726-110A6;0.0285874!10018-101C9;0.6784!10086-102B5;0.917926!10182-103D2;0.276525!10165-103B3;0.802445!10499-107C4;0.801619!10408-106B3;0.187954!10019-101D1;0.49301!10068-101I5;0.887606!10075-102A3;0.531537!10077-102A5;0.465536!10727-110A7;0.316541!10775-110G1;0.832274!10412-106B7;0.962736!12231-129F8;0.86809!12232-129F9;0.418517!12233-129G1;0.458716!12234-129G2;0.369403!10414-106B9;0.352646!10170-103B8;0.714325!10183-103D3;0.901459!10150-102I6;0.973654!10174-103C3;0.966883!10155-103A2;0.9129!10038-101F2;0.804364!10838-111E1;0.783785!10759-110E3;0.387489!10514-107E1;0.161222!10465-106H6;0.414942!10691-109F7;0.792993!10843-111E6;0.4783!10844-111E7;0.135041!11747-123G1;0.0327624!11748-123G2;0.245529!11749-123G3;0.329888!11750-123G4;0.0711177!11751-123G5;0.237457!11840-124H4;0.188516!11752-123G6;0.0961363!11753-123G7;0.399692!11754-123G8;0.317852!11755-123G9;0.667028!11756-123H1;0.145985!11833-124G6;0.183152!11760-123H5;0.0357414!11836-124G9;0.140131!11758-123H3;0.134304!11835-124G8;0.0753598!11762-123H7;0.315239!11838-124H2;0.120112!11757-123H2;0.205175!11759-123H4;0.13926!11761-123H6;0.235265!11842-124H6;0.548376!11837-124H1;0.213071!10568-108B1;0.426868!13230-141I8;0.294664!13231-141I9;0.37756!10696-109G3;0.46667!10493-107B7;0.600051!10494-107B8;0.0532128!10850-111F4;0.330184!10851-111F5;0.770165!10852-111F6;0.683398!10853-111F7;0.181202!10854-111F8;0.908845!10855-111F9;0.346997!10856-111G1;0.629668!10847-111F1;0.42433!10846-111E9;0.787808!10848-111F2;0.331584!10845-111E8;0.250792!10857-111G2;0.967282!10858-111G3;0.690318!10156-103A3;0.745119!11901-125F2;0.95037!11902-125F3;0.739381!11903-125F4;0.560284!10689-109F5;0.277584!10648-109A9;0.629251!10784-110H1;0.254418!10744-110C6;0.64828!10772-110F7;0.385454!10474-106I6;0.968082!10600-108E6;0.572465!10684-109E9;0.705963!12226-129F3;0.313092!12227-129F4;0.91542!10508-107D4;0.850302!10539-107G8;0.451998!10607-108F4;0.266053!10555-107I6;0.228055!10774-110F9;0.189439!10637-108I7;0.611265!10663-109C6;0.66418!10728-110A8;0.23934!10729-110A9;0.782687!10430-106D7;0.0969377!10730-110B1;0.51993!10813-111B3;0.319328!10812-111B2;0.844488!10037-101F1;0.297259!10172-103C1;0.953519!10163-103B1;0.911165!10076-102A4;0.88825!10073-102A1;0.992249!10036-101E9;0.384617!10195-103E6;0.858078!10277-104E7;0.978129!10434-106E2;0.782202!10550-107I1;0.695437!10545-107H5;0.258578!10544-107H4;0.783811!10704-109H2;0.71128!10510-107D6;0.762297!10558-107I9;0.770898!10020-101D2;0.450745!10732-110B3;0.434608!10049-101G4;0.245136!10698-109G5;0.407474!10437-106E5;0.540837!10417-106C3;0.751231!10035-101E8;0.439902!10171-103B9;0.94882!10157-103A4;0.925072!10034-101E7;0.971011!10072-101I9;0.960583!10199-103F1;0.234581!10200-103F2;0.630016!10697-109G4;0.838502!10723-110A3;0.81909!10179-103C8;0.0836507!10160-103A7;0.804365!10180-103C9;0.743208!10162-103A9;0.142176!10021-101D3;0.19861!10840-111E3;0.502816!10706-109H4;0.51358!10033-101E6;0.723338!10032-101E5;0.98167!10490-107B4;0.880058!10439-106E7;0.855604!10022-101D4;0.315862!10176-103C5;0.771855!10469-106I1;0.923583!10067-101I4;0.153933!10411-106B6;0.930905!10471-106I3;0.383114!10030-101E3;0.112098!10475-106I7;0.847931!10787-110H4;0.567416!10477-106I9;0.286133!10695-109G2;0.484566!11771-123I7;0.452727!11772-123I8;0.809241!11773-123I9;0.855483!10093-102C3;0.611295!10442-106F1;0.677923!10442-106F1;0.789958!10201-103F3;0.903714!10639-108I9;0.769132!11843-124H7;0.0942664!11841-124H5;0.356051!10693-109F9;0.637328!10436-106E4;0.589541!10483-107A6;0.470055!10282-104F3;0.520221!10023-101D5;0.522902!10066-101I3;0.818351!10065-101I2;0.903661!10800-110I8;0.968685!10610-108F7;0.187958!10841-111E4;0.35662!10541-107H1;0.596027!10842-111E5;0.329198!10562-108A4;0.252194!10024-101D6;0.141256!10064-101I1;0.849644!10609-108F6;0.676017!10048-101G3;0.149198!10781-110G7;0.608291!10181-103D1;0.193992!10159-103A6;0.756433!10056-101H2;0.791844!10737-110B8;0.500673!10025-101D7;0.298502!10044-101F8;0.516694!10424-106D1;0.935085!10463-106H4;0.84125!10616-108G4;0.742308!10486-107A9;0.895747!10062-101H8;0.94444!10202-103F4;0.928393!10158-103A5;0.67683!10441-106E9;0.787404!10031-101E4;0.327682!10063-101H9;0.806201!10063-101H9;0.35791!11763-123H8;0.741822!11765-123I1;0.457936!11768-123I4;0.114693!10807-111A6;0.0743125!10790-110H7;0.220198!10798-110I6;0.331785!10786-110H3;0.0865081!10591-108D6;0.221651!10593-108D8;0.259342!10590-108D5;0.578367!10026-101D8;0.38072!10096-102C6;0.88007!10168-103B6;0.483124!10154-103A1;0.76609!10209-103G2;0.765151!10061-101H7;0.984317!10027-101D9;0.978972!10043-101F7;0.242623!10783-110G9;0.436534!10028-101E1;0.74257!10060-101H6;0.259473!10203-103F5;0.893527!10059-101H5;0.95459!10047-101G2;0.912336!10029-101E2;0.811787!10058-101H4;0.774273!10418-106C4;0.9145!10492-107B6;0.132714!10694-109G1;0.688738!10797-110I5;0.825393!10057-101H3;0.418744!10100-102D1;0.964868!10055-101H1;0.495114!10204-103F6;0.894443!10191-103E2;0.590677!10563-108A5;0.876725
|name=motif_CCANTG
|name=motif_CCANTG
|tomtom_result=SOX9#MA0077.1;0;0.0031204;1.48531;1;6;CCAATG;CCATTGTTC;-!D#MA00445.1;1;0.00747777;3.55942;1;6;CCAATG;TCCATTGTTCT;+!ROX1#MA0371.1;1;0.0077058;3.66796;1;6;CCAATG;CCCATTGTTCTC;+!Sox17#MA0078.1;1;0.0161916;7.70721;1;6;CCAATG;TTCATTGTC;+!NRG1#MA0347.1;12;0.0164397;7.82531;1;6;CCAATG;CTAGATCAGGGTCCATCGCA;+!Sox2#MA0143.1;0;0.0184132;8.76466;1;6;CCAATG;CCTTTGTTATGCAAA;+
}}
}}

Latest revision as of 12:59, 7 September 2012

Full Name: motif_CCANTG

Motif matrix
POACGT
01031590400
02031590400
03315904000
0478976789767897678976
05000315904
06003159040

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SOX9#MA0077.100.00312041.4853116CCAATGCCATTGTTC-
D#MA00445.110.007477773.5594216CCAATGTCCATTGTTCT+
ROX1#MA0371.110.00770583.6679616CCAATGCCCATTGTTCTC+
Sox17#MA0078.110.01619167.7072116CCAATGTTCATTGTC+
NRG1#MA0347.1120.01643977.8253116CCAATGCTAGATCAGGGTCCATCGCA+
Sox2#MA0143.100.01841328.7646616CCAATGCCTTTGTTATGCAAA+
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