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MacroAPE 1083:Motif GANGTC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;19936;0!02;19936;0;0;0!03;4984;4984;4984;4984!04;0;0;19936;0!05;0;0;0;19936!06;0;19936;0;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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86!10534-107G3;0.656721!10429-106D6;0.80123!10464-106H5;0.904125!10827-111C8;0.73136!10789-110H6;0.90259!10828-111C9;0.671612!10788-110H5;0.45439!10792-110H9;0.472112!10765-110E9;0.58731!10829-111D1;0.923491!10830-111D2;0.909362!10831-111D3;0.428587!10832-111D4;0.580007!10833-111D5;0.953815!10764-110E8;0.686699!10770-110F5;0.984635!10399-106A3;0.44792!10400-106A4;0.903766!10405-106A9;0.767362!10834-111D6;0.966612!10835-111D7;0.618003!10836-111D8;0.646976!10837-111D9;0.773337!10699-109G6;0.425869!10802-111A1;0.43065!10796-110I4;0.936682!10010-101C1;0.171377!10810-111A9;0.584637!10421-106C7;0.494674!10708-109H6;0.971701!12235-129G3;0.739616!12236-129G4;0.789126!12237-129G5;0.470182!10167-103B5;0.93273!10151-102I7;0.804175!10428-106D5;0.663767!10795-110I3;0.689627!10805-111A4;0.740984!10052-101G7;0.0563059!10189-103D9;0.908818!10589-108D4;0.723754!10425-106D2;0.135382!10427-106D4;0.563973!10702-109G9;0.471082!10432-106D9;0.353178!10496-107C1;0.500559!10718-109I7;0.737622!10011-101C2;0.815566!10053-101G8;0.629575!10686-109F2;0.393305!10084-102B3;0.925274!10012-101C3;0.791928!10085-102B4;0.803915!10482-107A5;0.547824!10419-106C5;0.375999!10080-102A8;0.250157!10760-110E4;0.88095!10709-109H7;0.433113!10710-109H8;0.233797!10703-109H1;0.548048!10719-109I8;0.0491065!10642-109A3;0.0345899!10177-103C6;0.00870103!10164-103B2;0.828836!10173-103C2;0.68703!10166-103B4;0.719066!10083-102B2;0.615796!10188-103D8;0.671528!10552-107I3;0.922204!10553-107I4;0.957999!10013-101C4;0.418121!10536-107G5;0.808356!10618-108G6;0.173547!10423-106C9;0.584987!10785-110H2;0.366648!12238-129G6;0.64111!12239-129G7;0.35777!12240-129G8;0.696088!10416-106C2;0.351026!10801-110I9;0.556851!10766-110F1;0.953353!10824-111C5;0.635294!10825-111C6;0.968277!10826-111C7;0.919021!10454-106G4;0.965894!10409-106B4;0.986175!10638-108I8;0.638309!10636-108I6;0.415771!10513-107D9;0.50259!10420-106C6;0.325226!10082-102B1;0.0897086!10014-101C5;0.661435!10070-101I7;0.776063!10452-106G2;0.781783!10453-106G3;0.012898!10449-106F8;0.203464!10042-101F6;0.24561!10069-101I6;0.747327!10193-103E4;0.763131!10631-108I1;0.843234!10438-106E6;0.875177!10488-107B2;0.420375!10196-103E7;0.530451!10071-101I8;0.749799!10071-101I8;0.925738!10041-101F5;0.518172!10451-106G1;0.891757!10450-106F9;0.417582!10604-108F1;0.603521!10605-108F2;0.892361!10606-108F3;0.86225!10603-108E9;0.82558!10497-107C2;0.766501!10448-106F7;0.217714!10643-109A4;0.608656!10426-106D3;0.322198!10431-106D8;0.34579!10197-103E8;0.36308!10443-106F2;0.785226!10815-111B5;0.371137!10816-111B6;0.649603!10817-111B7;0.764046!10015-101C6;0.610471!10410-106B5;0.607052!10054-101G9;0.661167!10758-110E2;0.76438!10711-109H9;0.302528!10040-101F4;0.683466!10470-106I2;0.80198!10415-106C1;0.414996!10198-103E9;0.797572!10614-108G2;0.914592!10612-108F9;0.285031!10549-107H9;0.390079!10615-108G3;0.169909!10487-107B1;0.00282302!10433-106E1;0.293935!10688-109F4;0.501165!10444-106F3;0.320989!10444-106F3;0.317835!10485-107A8;0.392801!10413-106B8;0.807432!10175-103C4;0.814605!10161-103A8;0.926411!12131-128D7;0.801119!10624-108H3;0.604168!10712-109I1;0.536638!10205-103F7;0.0700343!10206-103F8;0.709932!10207-103F9;0.991848!10050-101G5;0.276805!10051-101G6;0.437405!10016-101C7;0.542214!10046-101G1;0.623655!10778-110G4;0.950736!10633-108I3;0.159927!10818-111B8;0.422922!10819-111B9;0.124967!10820-111C1;0.152672!10484-107A7;0.121635!10808-111A7;0.425255!10169-103B7;0.675069!10153-102I9;0.799477!13425-144D5;0.714652!13433-144E4;0.319163!13437-144E8;0.315073!11904-125F5;0.469749!11905-125F6;0.0754763!10039-101F3;0.199195!10791-110H8;0.783686!10017-101C8;0.324664!10045-101F9;0.801842!10509-107D5;0.455903!10839-111E2;0.62177!10692-109F8;0.721754!10079-102A7;0.211084!10078-102A6;0.977134!10721-110A1;0.637211!10569-108B2;0.984404!10570-108B3;0.815707!10571-108B4;0.748459!10647-109A8;0.62316!10752-110D5;0.302658!10782-110G8;0.731079!10726-110A6;0.414325!10018-101C9;0.675746!10086-102B5;0.719058!10182-103D2;0.763227!10165-103B3;0.848531!10499-107C4;0.861699!10408-106B3;0.384885!10019-101D1;0.236443!10068-101I5;0.971789!10075-102A3;0.778611!10077-102A5;0.859207!10727-110A7;0.906075!10775-110G1;0.717092!10412-106B7;0.993193!12231-129F8;0.537454!12232-129F9;0.31615!12233-129G1;0.268554!12234-129G2;0.316307!10414-106B9;0.423977!10170-103B8;0.0727785!10183-103D3;0.940922!10150-102I6;0.793476!10174-103C3;0.788811!10155-103A2;0.719443!10038-101F2;0.690249!10838-111E1;0.906971!10759-110E3;0.0757169!10514-107E1;0.704043!10465-106H6;0.987508!10691-109F7;0.935681!10843-111E6;0.307008!10844-111E7;0.0211519!11747-123G1;0.0685159!11748-123G2;0.346436!11749-123G3;0.526341!11750-123G4;0.500781!11751-123G5;0.287021!11840-124H4;0.353992!11752-123G6;0.845363!11753-123G7;0.192855!11754-123G8;0.350838!11755-123G9;0.280246!11756-123H1;0.130179!11833-124G6;0.163828!11760-123H5;0.409314!11836-124G9;0.513262!11758-123H3;0.568237!11835-124G8;0.396997!11762-123H7;0.556179!11838-124H2;0.215223!11757-123H2;0.669135!11759-123H4;0.289287!11761-123H6;0.322258!11842-124H6;0.518845!11837-124H1;0.305345!10568-108B1;0.669542!13230-141I8;0.343794!13231-141I9;0.653626!10696-109G3;0.675204!10493-107B7;0.814356!10494-107B8;0.66261!10850-111F4;0.174826!10851-111F5;0.774261!10852-111F6;0.649633!10853-111F7;0.432887!10854-111F8;0.640893!10855-111F9;0.0236566!10856-111G1;0.751805!10847-111F1;0.127046!10846-111E9;0.513708!10848-111F2;0.243242!10845-111E8;0.720534!10857-111G2;0.0902811!10858-111G3;0.403509!10156-103A3;0.607614!11901-125F2;0.752953!11902-125F3;0.751293!11903-125F4;0.317308!10689-109F5;0.319161!10648-109A9;0.708259!10784-110H1;0.811125!10744-110C6;0.945099!10772-110F7;0.184755!10474-106I6;0.682145!10600-108E6;0.515258!10684-109E9;0.186335!12226-129F3;0.573115!12227-129F4;0.700558!10508-107D4;0.774607!10539-107G8;0.55584!10607-108F4;0.708541!10555-107I6;0.0631101!10774-110F9;0.865296!10637-108I7;0.17876!10663-109C6;0.0163358!10728-110A8;0.22158!10729-110A9;0.220958!10430-106D7;0.350481!10730-110B1;0.895857!10813-111B3;0.508445!10812-111B2;0.874015!10037-101F1;0.687809!10172-103C1;0.773782!10163-103B1;0.862007!10076-102A4;0.822852!10073-102A1;0.831628!10036-101E9;0.515527!10195-103E6;0.829491!10277-104E7;0.758707!10434-106E2;0.912571!10550-107I1;0.097598!10545-107H5;0.424696!10544-107H4;0.25215!10704-109H2;0.448853!10510-107D6;0.458946!10558-107I9;0.674016!10020-101D2;0.613233!10732-110B3;0.898064!10049-101G4;0.483961!10698-109G5;0.566162!10437-106E5;0.616376!10417-106C3;0.172582!10035-101E8;0.614251!10171-103B9;0.811561!10157-103A4;0.867161!10034-101E7;0.775987!10072-101I9;0.829829!10199-103F1;0.373601!10200-103F2;0.495537!10697-109G4;0.911898!10723-110A3;0.797583!10179-103C8;0.369612!10160-103A7;0.622924!10180-103C9;0.964144!10162-103A9;0.655475!10021-101D3;0.540332!10840-111E3;0.886084!10706-109H4;0.498438!10033-101E6;0.920888!10032-101E5;0.796739!10490-107B4;0.822784!10439-106E7;0.267652!10022-101D4;0.12198!10176-103C5;0.768001!10469-106I1;0.732925!10067-101I4;0.638952!10411-106B6;0.811196!10471-106I3;0.0833605!10030-101E3;0.312142!10475-106I7;0.802959!10787-110H4;0.106623!10477-106I9;0.552528!10695-109G2;0.325634!11771-123I7;0.67831!11772-123I8;0.0350739!11773-123I9;0.00927433!10093-102C3;0.0534317!10442-106F1;0.595744!10442-106F1;0.853738!10201-103F3;0.700744!10639-108I9;0.902493!11843-124H7;0.760519!11841-124H5;0.771731!10693-109F9;0.618426!10436-106E4;0.644287!10483-107A6;0.806766!10282-104F3;0.482209!10023-101D5;0.689203!10066-101I3;0.59059!10065-101I2;0.813503!10800-110I8;0.563092!10610-108F7;0.136011!10841-111E4;0.0190017!10541-107H1;0.19041!10842-111E5;0.115015!10562-108A4;0.376842!10024-101D6;0.474044!10064-101I1;0.92948!10609-108F6;0.726521!10048-101G3;0.327496!10781-110G7;0.758358!10181-103D1;0.63431!10159-103A6;0.967076!10056-101H2;0.731263!10737-110B8;0.703524!10025-101D7;0.338094!10044-101F8;0.97316!10424-106D1;0.913836!10463-106H4;0.273976!10616-108G4;0.512016!10486-107A9;0.755365!10062-101H8;0.901997!10202-103F4;0.871!10158-103A5;0.571811!10441-106E9;0.700313!10031-101E4;0.921981!10063-101H9;0.810276!10063-101H9;0.498654!11763-123H8;0.900395!11765-123I1;0.670796!11768-123I4;0.655106!10807-111A6;0.753472!10790-110H7;0.559062!10798-110I6;0.336034!10786-110H3;0.266303!10591-108D6;0.547402!10593-108D8;0.649643!10590-108D5;0.425749!10026-101D8;0.392857!10096-102C6;0.500144!10168-103B6;0.528548!10154-103A1;0.896592!10209-103G2;0.715649!10061-101H7;0.689184!10027-101D9;0.515515!10043-101F7;0.768415!10783-110G9;0.965415!10028-101E1;0.170345!10060-101H6;0.43498!10203-103F5;0.978406!10059-101H5;0.952335!10047-101G2;0.966862!10029-101E2;0.736953!10058-101H4;0.65907!10418-106C4;0.751011!10492-107B6;0.123302!10694-109G1;0.0430936!10797-110I5;0.865875!10057-101H3;0.568618!10100-102D1;0.865194!10055-101H1;0.98208!10204-103F6;0.52619!10191-103E2;0.767215!10563-108A5;0.824172
|name=motif_GANGTC
|name=motif_GANGTC
|tomtom_result=CREB1#MA0018.2;1;0.00113606;0.540763;0.759051;6;GAAGTC;TGACGTCA;+!CST6#MA0286.1;1;0.0097565;4.64409;1;6;GAAGTC;TTACGTCAT;-!RXR::RAR_DR5#MA0159.1;10;0.0116124;5.52751;1;6;GAAGTC;AGGTCATGGAGAGGTCA;+!CREB1#MA0018.2;6;0.0134309;6.39312;1;6;GAAGTC;CCTGGTGACGTC;+!NR4A2#MA0160.1;0;0.0172278;8.20041;1;6;GAAGTC;AAGGTCAC;+
}}
}}

Latest revision as of 13:05, 7 September 2012

Full Name: motif_GANGTC

Motif matrix
POACGT
0100199360
0219936000
034984498449844984
0400199360
0500019936
0601993600

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CREB1#MA0018.210.001136060.5407630.7590516GAAGTCTGACGTCA+
CST6#MA0286.110.00975654.6440916GAAGTCTTACGTCAT-
RXR::RAR_DR5#MA0159.1100.01161245.5275116GAAGTCAGGTCATGGAGAGGTCA+
CREB1#MA0018.260.01343096.3931216GAAGTCCCTGGTGACGTC+
NR4A2#MA0160.100.01722788.2004116GAAGTCAAGGTCAC+
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