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MacroAPE 1083:Motif554: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;121307;0;0;0!02;121307;0;0;0!03;121307;0;0;0!04;0;0;121307;0!05;7455;0;109947;3905!06;38847;21428;47646;13386!07;71542;0;32024;17741 |macr...")
 
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0-129A2;0.122324!12181-129A3;0.111394!12176-128I7;0.1879!12177-128I8;0.102274!12182-129A4;0.111977!12183-129A5;0.176578!12184-129A6;0.0981209!10809-111A8;0.15694!10597-108E3;0.482957!10717-109I6;0.558408!10455-106G5;0.922232!10534-107G3;0.0012397!10429-106D6;0.00456416!10464-106H5;0.00112862!10827-111C8;0.0133699!10789-110H6;0.00224341!10828-111C9;0.0847126!10788-110H5;0.148345!10792-110H9;0.00963421!10765-110E9;0.0115044!10829-111D1;0.0866551!10830-111D2;0.0603932!10831-111D3;0.0153937!10832-111D4;0.143956!10833-111D5;0.153331!10764-110E8;0.140975!10770-110F5;0.241086!10399-106A3;0.0519035!10400-106A4;0.16899!10405-106A9;0.145771!10834-111D6;0.166433!10835-111D7;0.175462!10836-111D8;0.0964425!10837-111D9;0.0170408!10699-109G6;0.0025974!10802-111A1;0.000316591!10796-110I4;0.000513568!10010-101C1;0.789007!10810-111A9;0.941972!10421-106C7;0.89408!10708-109H6;0.000825713!12235-129G3;0.646744!12236-129G4;0.923392!12237-129G5;0.419561!10167-103B5;0.558475!10151-102I7;0.793539!10428-106D5;0.996753!10795-110I3;0.0225317!10805-111A4;0.0177654!10052-101G7;0.855529!10189-103D9;0.617858!10589-108D4;0.2722!10425-106D2;0.274136!10427-106D4;0.973584!10702-109G9;0.00328157!10432-106D9;0.553299!10496-107C1;0.852959!10718-109I7;0.655469!10011-101C2;0.152921!10053-101G8;0.685852!10686-109F2;0.179494!10084-102B3;0.853276!10012-101C3;0.492446!10085-102B4;0.745933!10482-107A5;0.209717!10419-106C5;0.26554!10080-102A8;0.783508!10760-110E4;0.450449!10709-109H7;0.427413!10710-109H8;0.441202!10703-109H1;0.646637!10719-109I8;0.742388!10642-109A3;0.868683!10177-103C6;0.864397!10164-103B2;0.968059!10173-103C2;0.793384!10166-103B4;0.898605!10083-102B2;0.884899!10188-103D8;0.806919!10552-107I3;0.772345!10553-107I4;0.576431!10013-101C4;0.209511!10536-107G5;0.902902!10618-108G6;0.00468943!10423-106C9;0.993757!10785-110H2;0.954679!12238-129G6;0.907975!12239-129G7;0.384159!12240-129G8;0.134782!10416-106C2;0.649257!10801-110I9;0.00579781!10766-110F1;2.78668e-05!10824-111C5;0.00269276!10825-111C6;0.044911!10826-111C7;0.0303349!10454-106G4;0.0329983!10409-106B4;0.16851!10638-108I8;0.00718259!10636-108I6;0.56807!10513-107D9;0.921389!10420-106C6;0.311449!10082-102B1;0.437022!10014-101C5;0.776308!10070-101I7;0.977715!10452-106G2;0.954983!10453-106G3;0.205658!10449-106F8;0.130825!10042-101F6;0.159923!10069-101I6;0.719563!10193-103E4;0.678777!10631-108I1;0.985991!10438-106E6;0.00472687!10488-107B2;0.906293!10196-103E7;0.869403!10071-101I8;0.227928!10071-101I8;0.979294!10041-101F5;0.518213!10451-106G1;0.915333!10450-106F9;0.747361!10604-108F1;0.829045!10605-108F2;0.614536!10606-108F3;0.249593!10603-108E9;0.387051!10497-107C2;0.626147!10448-106F7;0.63267!10643-109A4;0.533065!10426-106D3;0.469012!10431-106D8;0.475805!10197-103E8;0.732002!10443-106F2;0.386308!10815-111B5;0.7362!10816-111B6;0.789062!10817-111B7;0.861526!10015-101C6;0.865633!10410-106B5;0.711882!10054-101G9;0.294427!10758-110E2;0.642564!10711-109H9;0.440166!10040-101F4;0.685862!10470-106I2;0.919597!10415-106C1;0.569214!10198-103E9;0.33339!10614-108G2;0.946295!10612-108F9;0.57757!10549-107H9;0.656852!10615-108G3;0.872868!10487-107B1;0.653604!10433-106E1;0.776945!10688-109F4;0.614039!10444-106F3;0.891298!10444-106F3;0.680321!10485-107A8;0.679022!10413-106B8;0.95655!10175-103C4;0.76914!10161-103A8;0.756121!12131-128D7;0.998627!10624-108H3;0.0159909!10712-109I1;0.42214!10205-103F7;0.0626457!10206-103F8;0.603867!10207-103F9;0.233529!10050-101G5;0.799422!10051-101G6;0.448002!10016-101C7;0.805225!10046-101G1;0.746846!10778-110G4;0.93423!10633-108I3;0.0499248!10818-111B8;0.758429!10819-111B9;0.85346!10820-111C1;0.812353!10484-107A7;0.858822!10808-111A7;0.713776!10169-103B7;0.00327251!10153-102I9;0.875624!13425-144D5;0.935406!13433-144E4;0.422772!13437-144E8;0.502158!11904-125F5;0.587928!11905-125F6;0.689814!10039-101F3;0.936929!10791-110H8;0.844477!10017-101C8;0.544927!10045-101F9;0.915595!10509-107D5;0.235517!10839-111E2;0.905672!10692-109F8;0.568212!10079-102A7;0.68135!10078-102A6;0.471038!10721-110A1;0.785957!10569-108B2;0.851412!10570-108B3;0.150672!10571-108B4;0.297789!10647-109A8;0.556459!10752-110D5;0.851092!10782-110G8;0.140283!10726-110A6;0.290801!10018-101C9;0.28098!10086-102B5;0.685506!10182-103D2;0.882192!10165-103B3;0.774819!10499-107C4;0.938089!10408-106B3;0.540665!10019-101D1;0.781079!10068-101I5;0.67874!10075-102A3;0.927432!10077-102A5;0.812271!10727-110A7;0.576115!10775-110G1;0.00130207!10412-106B7;0.00837431!12231-129F8;0.974144!12232-129F9;0.290418!12233-129G1;0.448763!12234-129G2;0.755682!10414-106B9;0.857005!10170-103B8;0.895952!10183-103D3;0.779755!10150-102I6;0.91981!10174-103C3;0.974769!10155-103A2;0.93193!10038-101F2;0.810512!10838-111E1;0.787948!10759-110E3;0.751295!10514-107E1;0.275259!10465-106H6;0.831328!10691-109F7;0.729961!10843-111E6;0.64017!10844-111E7;0.445953!11747-123G1;0.971982!11748-123G2;0.438451!11749-123G3;0.117985!11750-123G4;0.297957!11751-123G5;0.484683!11840-124H4;0.461015!11752-123G6;0.278634!11753-123G7;0.255428!11754-123G8;0.110902!11755-123G9;0.130192!11756-123H1;0.187577!11833-124G6;0.0359279!11760-123H5;0.154026!11836-124G9;0.0216074!11758-123H3;0.700432!11835-124G8;0.288952!11762-123H7;0.00695482!11838-124H2;0.153935!11757-123H2;0.0810776!11759-123H4;0.946222!11761-123H6;0.0805115!11842-124H6;0.108285!11837-124H1;0.0201485!10568-108B1;0.0198335!13230-141I8;0.487276!13231-141I9;0.272206!10696-109G3;0.165106!10493-107B7;0.735428!10494-107B8;0.638089!10850-111F4;0.679569!10851-111F5;0.177155!10852-111F6;0.245453!10853-111F7;0.576474!10854-111F8;0.644391!10855-111F9;0.776128!10856-111G1;0.21881!10847-111F1;0.262058!10846-111E9;0.767399!10848-111F2;0.671381!10845-111E8;0.665939!10857-111G2;0.723562!10858-111G3;0.774356!10156-103A3;0.386615!11901-125F2;0.933034!11902-125F3;0.11765!11903-125F4;0.111065!10689-109F5;0.223251!10648-109A9;0.626107!10784-110H1;0.442415!10744-110C6;0.347368!10772-110F7;0.000557092!10474-106I6;0.0730461!10600-108E6;0.00105053!10684-109E9;0.858866!12226-129F3;0.346539!12227-129F4;0.0335415!10508-107D4;0.372608!10539-107G8;0.602541!10607-108F4;0.64935!10555-107I6;0.531471!10774-110F9;0.583016!10637-108I7;0.859146!10663-109C6;0.809451!10728-110A8;0.623043!10729-110A9;0.785123!10430-106D7;0.273678!10730-110B1;0.00322629!10813-111B3;0.444102!10812-111B2;0.068455!10037-101F1;0.159954!10172-103C1;0.882544!10163-103B1;0.791924!10076-102A4;0.986662!10073-102A1;0.750869!10036-101E9;0.595021!10195-103E6;0.603308!10277-104E7;0.944326!10434-106E2;0.541264!10550-107I1;0.555112!10545-107H5;0.593068!10544-107H4;0.521593!10704-109H2;0.863384!10510-107D6;0.0141322!10558-107I9;0.522005!10020-101D2;0.994193!10732-110B3;0.811344!10049-101G4;0.464062!10698-109G5;0.222265!10437-106E5;0.875047!10417-106C3;0.877575!10035-101E8;0.244734!10171-103B9;0.785684!10157-103A4;0.763163!10034-101E7;0.939402!10072-101I9;0.79862!10199-103F1;0.552092!10200-103F2;0.937129!10697-109G4;0.730698!10723-110A3;0.907032!10179-103C8;0.124415!10160-103A7;0.895201!10180-103C9;0.571277!10162-103A9;0.311671!10021-101D3;0.343861!10840-111E3;0.943975!10706-109H4;0.00303517!10033-101E6;0.49089!10032-101E5;0.938443!10490-107B4;0.636153!10439-106E7;0.959743!10022-101D4;0.706869!10176-103C5;0.70482!10469-106I1;0.910442!10067-101I4;0.957493!10411-106B6;0.768955!10471-106I3;0.974504!10030-101E3;0.756778!10475-106I7;0.757872!10787-110H4;0.306374!10477-106I9;0.583174!10695-109G2;0.656252!11771-123I7;0.118788!11772-123I8;0.385221!11773-123I9;0.254263!10093-102C3;0.176723!10442-106F1;0.864842!10442-106F1;0.735954!10201-103F3;0.801664!10639-108I9;0.294126!11843-124H7;0.646732!11841-124H5;0.00908651!10693-109F9;0.339365!10436-106E4;0.899899!10483-107A6;0.303316!10282-104F3;0.885326!10023-101D5;0.949735!10066-101I3;0.467431!10065-101I2;0.339793!10800-110I8;0.947298!10610-108F7;0.99145!10841-111E4;0.799207!10541-107H1;0.977102!10842-111E5;0.611673!10562-108A4;0.560873!10024-101D6;0.790279!10064-101I1;0.782361!10609-108F6;0.76185!10048-101G3;0.993994!10781-110G7;0.920083!10181-103D1;0.947785!10159-103A6;0.899393!10056-101H2;0.551765!10737-110B8;0.514202!10025-101D7;0.25181!10044-101F8;0.690042!10424-106D1;0.945533!10463-106H4;0.000467437!10616-108G4;0.680181!10486-107A9;0.64372!10062-101H8;0.997122!10202-103F4;0.554836!10158-103A5;0.788467!10441-106E9;0.845145!10031-101E4;0.680286!10063-101H9;0.582817!10063-101H9;0.522296!11763-123H8;0.560191!11765-123I1;0.444845!11768-123I4;0.306149!10807-111A6;0.576638!10790-110H7;0.441997!10798-110I6;0.943953!10786-110H3;0.971138!10591-108D6;0.305333!10593-108D8;0.664143!10590-108D5;0.674442!10026-101D8;0.913858!10096-102C6;0.922569!10168-103B6;0.48423!10154-103A1;0.856354!10209-103G2;0.837395!10061-101H7;0.985265!10027-101D9;0.942941!10043-101F7;0.00338648!10783-110G9;0.0798122!10028-101E1;0.85038!10060-101H6;0.62574!10203-103F5;0.9842!10059-101H5;0.966408!10047-101G2;0.598774!10029-101E2;0.672068!10058-101H4;0.718292!10418-106C4;0.577768!10492-107B6;0.363324!10694-109G1;0.853873!10797-110I5;0.561357!10057-101H3;0.746223!10100-102D1;0.836735!10055-101H1;0.954435!10204-103F6;0.7237!10191-103E2;0.811166!10563-108A5;0.436057
|name=motif554
|name=motif554
|tomtom_result=RME1#MA0370.1;3;2.0627e-05;0.00981846;0.0196369;7;AAAGGGA;TCCAAAGGAA;+!Dof3#MA0021.1;0;0.00323779;1.54119;1;6;AAAGGGA;AAAGCG;+!AZF1#MA0277.1;1;0.00510552;2.43023;1;7;AAAGGGA;AAAAAGAAA;+!Klf4#MA0039.1;1;0.00513067;2.4422;1;7;AAAGGGA;TAAAGGAAGG;+!Kr#MA0452.1;2;0.0069605;3.3132;1;7;AAAGGGA;CAAAAGGGTTA;+!Dof2#MA0020.1;0;0.00718018;3.41777;1;6;AAAGGGA;AAAGCA;+!id1#MA0120.1;3;0.00912201;4.34208;1;7;AAAGGGA;CGAAAAGGAAAA;-!PBF#MA0064.1;0;0.00921097;4.38442;1;5;AAAGGGA;AAAGC;+!FKH1#MA0296.1;12;0.0113982;5.42553;1;7;AAAGGGA;TGAATTGTAAACAAAGAGGA;+!Hltf#MA0109.1;3;0.0138505;6.59282;1;7;AAAGGGA;ATATAAGGTT;-!MNB1A#MA0053.1;0;0.0143765;6.84319;1;5;AAAGGGA;AAAGC;+!YER130C#MA0423.1;1;0.0150943;7.18487;1;7;AAAGGGA;AATAGGGGT;-!HMG-I/Y#MA0045.1;4;0.0169962;8.09017;1;7;AAAGGGA;CAACAAATGGAAAAAC;+
}}
}}

Latest revision as of 13:10, 7 September 2012

Full Name: motif554

Motif matrix
POACGT
01121307000
02121307000
03121307000
04001213070
05745501099473905
0638847214284764613386
077154203202417741

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RME1#MA0370.132.0627e-050.009818460.01963697AAAGGGATCCAAAGGAA+
Dof3#MA0021.100.003237791.5411916AAAGGGAAAAGCG+
AZF1#MA0277.110.005105522.4302317AAAGGGAAAAAAGAAA+
Klf4#MA0039.110.005130672.442217AAAGGGATAAAGGAAGG+
Kr#MA0452.120.00696053.313217AAAGGGACAAAAGGGTTA+
Dof2#MA0020.100.007180183.4177716AAAGGGAAAAGCA+
id1#MA0120.130.009122014.3420817AAAGGGACGAAAAGGAAAA-
PBF#MA0064.100.009210974.3844215AAAGGGAAAAGC+
FKH1#MA0296.1120.01139825.4255317AAAGGGATGAATTGTAAACAAAGAGGA+
Hltf#MA0109.130.01385056.5928217AAAGGGAATATAAGGTT-
MNB1A#MA0053.100.01437656.8431915AAAGGGAAAAGC+
YER130C#MA0423.110.01509437.1848717AAAGGGAAATAGGGGT-
HMG-I/Y#MA0045.140.01699628.0901717AAAGGGACAACAAATGGAAAAAC+
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