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MacroAPE 1083:Motif AGNCGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;288;0;0;0!02;0;0;288;0!03;72;72;72;72!04;0;288;0;0!05;0;0;288;0!06;0;0;0;288 |macroape_1083_sample_pvalues=11376-118A8;0.593926!11327-117E...")
 
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;0.62625!10792-110H9;0.447161!10765-110E9;0.88913!10829-111D1;0.965057!10830-111D2;0.398738!10831-111D3;0.86112!10832-111D4;0.217127!10833-111D5;0.733937!10764-110E8;0.464034!10770-110F5;0.709837!10399-106A3;0.692442!10400-106A4;0.536007!10405-106A9;0.59962!10834-111D6;0.363727!10835-111D7;0.304372!10836-111D8;0.0543738!10837-111D9;0.263689!10699-109G6;0.335214!10802-111A1;0.143005!10796-110I4;0.411073!10010-101C1;0.884935!10810-111A9;0.291208!10421-106C7;0.275923!10708-109H6;0.370575!12235-129G3;0.156845!12236-129G4;0.868218!12237-129G5;0.717549!10167-103B5;0.802847!10151-102I7;0.518992!10428-106D5;0.567402!10795-110I3;0.239049!10805-111A4;0.510398!10052-101G7;0.714895!10189-103D9;0.298787!10589-108D4;0.473521!10425-106D2;0.850235!10427-106D4;0.417525!10702-109G9;0.107936!10432-106D9;0.6375!10496-107C1;0.683522!10718-109I7;0.749065!10011-101C2;0.768978!10053-101G8;0.609045!10686-109F2;0.161757!10084-102B3;0.333698!10012-101C3;0.348714!10085-102B4;0.471632!10482-107A5;0.476761!10419-106C5;0.81626!10080-102A8;0.519795!10760-110E4;0.226189!10709-109H7;0.679816!10710-109H8;0.768715!10703-109H1;0.899803!10719-109I8;0.986313!10642-109A3;0.202631!10177-103C6;0.966919!10164-103B2;0.500275!10173-103C2;0.447062!10166-103B4;0.493215!10083-102B2;0.452541!10188-103D8;0.298639!10552-107I3;0.373046!10553-107I4;0.557959!10013-101C4;0.811468!10536-107G5;0.585081!10618-108G6;0.759763!10423-106C9;0.665535!10785-110H2;0.556818!12238-129G6;0.709176!12239-129G7;0.783685!12240-129G8;0.539569!10416-106C2;0.681702!10801-110I9;0.860723!10766-110F1;0.512233!10824-111C5;0.40737!10825-111C6;0.0792458!10826-111C7;0.091396!10454-106G4;0.0515694!10409-106B4;0.0484388!10638-108I8;0.277013!10636-108I6;0.658533!10513-107D9;0.691339!10420-106C6;0.692473!10082-102B1;0.289792!10014-101C5;0.566282!10070-101I7;0.608392!10452-106G2;0.440368!10453-106G3;0.708714!10449-106F8;0.99517!10042-101F6;0.951763!10069-101I6;0.346868!10193-103E4;0.176411!10631-108I1;0.423326!10438-106E6;0.798025!10488-107B2;0.576528!10196-103E7;0.152525!10071-101I8;0.555728!10071-101I8;0.387647!10041-101F5;0.732132!10451-106G1;0.408126!10450-106F9;0.905393!10604-108F1;0.572128!10605-108F2;0.0780929!10606-108F3;0.0784749!10603-108E9;0.0773435!10497-107C2;0.0492423!10448-106F7;0.98123!10643-109A4;0.135676!10426-106D3;0.861428!10431-106D8;0.492219!10197-103E8;0.641997!10443-106F2;0.238763!10815-111B5;0.321363!10816-111B6;0.283645!10817-111B7;0.231141!10015-101C6;0.320419!10410-106B5;0.646861!10054-101G9;0.256335!10758-110E2;0.19135!10711-109H9;0.177173!10040-101F4;0.245104!10470-106I2;0.549561!10415-106C1;0.739501!10198-103E9;0.427298!10614-108G2;0.585537!10612-108F9;0.726157!10549-107H9;0.949506!10615-108G3;0.350139!10487-107B1;0.724417!10433-106E1;0.549994!10688-109F4;0.123177!10444-106F3;0.767619!10444-106F3;0.4984!10485-107A8;0.383798!10413-106B8;0.483459!10175-103C4;0.260727!10161-103A8;0.475968!12131-128D7;0.495151!10624-108H3;0.42059!10712-109I1;0.149104!10205-103F7;0.990515!10206-103F8;0.280122!10207-103F9;0.317389!10050-101G5;0.792107!10051-101G6;0.612106!10016-101C7;0.0644765!10046-101G1;0.122154!10778-110G4;0.285507!10633-108I3;0.352726!10818-111B8;0.918218!10819-111B9;0.79088!10820-111C1;0.871131!10484-107A7;0.851423!10808-111A7;0.98298!10169-103B7;0.525602!10153-102I9;0.521542!13425-144D5;0.447349!13433-144E4;0.880335!13437-144E8;0.826357!11904-125F5;0.773038!11905-125F6;0.922226!10039-101F3;0.727855!10791-110H8;0.517508!10017-101C8;0.999018!10045-101F9;0.449468!10509-107D5;0.431865!10839-111E2;0.501952!10692-109F8;0.960737!10079-102A7;0.495656!10078-102A6;0.152881!10721-110A1;0.101475!10569-108B2;0.125849!10570-108B3;0.636781!10571-108B4;0.861559!10647-109A8;0.484921!10752-110D5;0.317528!10782-110G8;0.200921!10726-110A6;0.505539!10018-101C9;0.266828!10086-102B5;0.484142!10182-103D2;0.331052!10165-103B3;0.520078!10499-107C4;0.51688!10408-106B3;0.26681!10019-101D1;0.841785!10068-101I5;0.675462!10075-102A3;0.665179!10077-102A5;0.60181!10727-110A7;0.278502!10775-110G1;0.521354!10412-106B7;0.999232!12231-129F8;0.590524!12232-129F9;0.588549!12233-129G1;0.447366!12234-129G2;0.478531!10414-106B9;0.384269!10170-103B8;0.896472!10183-103D3;0.565388!10150-102I6;0.622444!10174-103C3;0.533874!10155-103A2;0.302051!10038-101F2;0.313239!10838-111E1;0.336544!10759-110E3;0.435449!10514-107E1;0.25118!10465-106H6;0.331141!10691-109F7;0.32304!10843-111E6;0.395232!10844-111E7;0.984814!11747-123G1;0.7357!11748-123G2;0.4678!11749-123G3;0.536328!11750-123G4;0.449716!11751-123G5;0.616844!11840-124H4;0.898592!11752-123G6;0.854212!11753-123G7;0.617076!11754-123G8;0.755892!11755-123G9;0.57695!11756-123H1;0.338791!11833-124G6;0.0888715!11760-123H5;0.353333!11836-124G9;0.177312!11758-123H3;0.296092!11835-124G8;0.477889!11762-123H7;0.3667!11838-124H2;0.389101!11757-123H2;0.215024!11759-123H4;0.106442!11761-123H6;0.25959!11842-124H6;0.0341985!11837-124H1;0.236096!10568-108B1;0.173283!13230-141I8;0.669163!13231-141I9;0.894803!10696-109G3;0.860235!10493-107B7;0.684486!10494-107B8;0.0464604!10850-111F4;0.745446!10851-111F5;0.77616!10852-111F6;0.227708!10853-111F7;0.768841!10854-111F8;0.588534!10855-111F9;0.284996!10856-111G1;0.915999!10847-111F1;0.857208!10846-111E9;0.138037!10848-111F2;0.634776!10845-111E8;0.0521265!10857-111G2;0.750332!10858-111G3;0.210713!10156-103A3;0.0712041!11901-125F2;0.532709!11902-125F3;0.321506!11903-125F4;0.606612!10689-109F5;0.721485!10648-109A9;0.660162!10784-110H1;0.296102!10744-110C6;0.593929!10772-110F7;0.854024!10474-106I6;0.566359!10600-108E6;0.829315!10684-109E9;0.215784!12226-129F3;0.521685!12227-129F4;0.924893!10508-107D4;0.70477!10539-107G8;0.75408!10607-108F4;0.834274!10555-107I6;0.145343!10774-110F9;0.788592!10637-108I7;0.351214!10663-109C6;0.675832!10728-110A8;0.284574!10729-110A9;0.288742!10430-106D7;0.615572!10730-110B1;0.408433!10813-111B3;0.496779!10812-111B2;0.601675!10037-101F1;0.856045!10172-103C1;0.516419!10163-103B1;0.519563!10076-102A4;0.452794!10073-102A1;0.4483!10036-101E9;0.754653!10195-103E6;0.330185!10277-104E7;0.493265!10434-106E2;0.41313!10550-107I1;0.474204!10545-107H5;0.668187!10544-107H4;0.592!10704-109H2;0.773367!10510-107D6;0.597913!10558-107I9;0.116958!10020-101D2;0.791827!10732-110B3;0.635278!10049-101G4;0.263954!10698-109G5;0.590413!10437-106E5;0.732833!10417-106C3;0.355651!10035-101E8;0.77435!10171-103B9;0.480241!10157-103A4;0.476305!10034-101E7;0.518587!10072-101I9;0.443565!10199-103F1;0.70839!10200-103F2;0.781502!10697-109G4;0.466481!10723-110A3;0.663273!10179-103C8;0.913714!10160-103A7;0.504762!10180-103C9;0.438118!10162-103A9;0.831937!10021-101D3;0.875455!10840-111E3;0.688994!10706-109H4;0.860786!10033-101E6;0.720573!10032-101E5;0.444212!10490-107B4;0.397132!10439-106E7;0.700963!10022-101D4;0.766546!10176-103C5;0.622195!10469-106I1;0.50225!10067-101I4;0.775203!10411-106B6;0.410554!10471-106I3;0.616422!10030-101E3;0.410634!10475-106I7;0.181763!10787-110H4;0.493315!10477-106I9;0.676655!10695-109G2;0.58663!11771-123I7;0.787565!11772-123I8;0.823845!11773-123I9;0.794178!10093-102C3;0.842995!10442-106F1;0.779554!10442-106F1;0.151154!10201-103F3;0.154698!10639-108I9;0.771784!11843-124H7;0.849762!11841-124H5;0.501416!10693-109F9;0.123019!10436-106E4;0.801809!10483-107A6;0.903877!10282-104F3;0.950829!10023-101D5;0.100537!10066-101I3;0.0753823!10065-101I2;0.191398!10800-110I8;0.374759!10610-108F7;0.767431!10841-111E4;0.374979!10541-107H1;0.702084!10842-111E5;0.957689!10562-108A4;0.81163!10024-101D6;0.834413!10064-101I1;0.745675!10609-108F6;0.450391!10048-101G3;0.968779!10781-110G7;0.596027!10181-103D1;0.754485!10159-103A6;0.391051!10056-101H2;0.355563!10737-110B8;0.317535!10025-101D7;0.373967!10044-101F8;0.415847!10424-106D1;0.565052!10463-106H4;0.74336!10616-108G4;0.582317!10486-107A9;0.544502!10062-101H8;0.85547!10202-103F4;0.526183!10158-103A5;0.670204!10441-106E9;0.368627!10031-101E4;0.637168!10063-101H9;0.414421!10063-101H9;0.738064!11763-123H8;0.446722!11765-123I1;0.923134!11768-123I4;0.501828!10807-111A6;0.839389!10790-110H7;0.569813!10798-110I6;0.533169!10786-110H3;0.280731!10591-108D6;0.862687!10593-108D8;0.82514!10590-108D5;0.875839!10026-101D8;0.702858!10096-102C6;0.264626!10168-103B6;0.697292!10154-103A1;0.432411!10209-103G2;0.474765!10061-101H7;0.43747!10027-101D9;0.404424!10043-101F7;0.924505!10783-110G9;0.586434!10028-101E1;0.516974!10060-101H6;0.594825!10203-103F5;0.43425!10059-101H5;0.452743!10047-101G2;0.335429!10029-101E2;0.712474!10058-101H4;0.651951!10418-106C4;0.454463!10492-107B6;0.643674!10694-109G1;0.254435!10797-110I5;0.269705!10057-101H3;0.693204!10100-102D1;0.546213!10055-101H1;0.572045!10204-103F6;0.530146!10191-103E2;0.325396!10563-108A5;0.239695
|name=motif_AGNCGT
|name=motif_AGNCGT
|tomtom_result=EmBP-1#MA0128.1;0;0.0120225;5.72269;1;6;AGACGT;ACACGTGG;+!YPR015C#MA0435.1;3;0.0151216;7.19787;1;6;AGACGT;TGAAGACGTAAATCCTTACA;+!CREB1#MA0018.2;0;0.0175253;8.34204;1;6;AGACGT;TGACGTCA;-
}}
}}

Latest revision as of 13:11, 7 September 2012

Full Name: motif_AGNCGT

Motif matrix
POACGT
01288000
02002880
0372727272
04028800
05002880
06000288

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
EmBP-1#MA0128.100.01202255.7226916AGACGTACACGTGG+
YPR015C#MA0435.130.01512167.1978716AGACGTTGAAGACGTAAATCCTTACA+
CREB1#MA0018.200.01752538.3420416AGACGTTGACGTCA-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_AGNCGT&oldid=2133914"