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MacroAPE 1083:Motif CNGATG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;1344;0;0!02;336;336;336;336!03;0;0;1344;0!04;1344;0;0;0!05;0;0;0;1344!06;0;0;1344;0 |macroape_1083_sample_pvalues=11376-118A8;0.191031!1...")
 
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7562!10534-107G3;0.35096!10429-106D6;0.212043!10464-106H5;0.546645!10827-111C8;0.262452!10789-110H6;0.160597!10828-111C9;0.170515!10788-110H5;0.343669!10792-110H9;0.454086!10765-110E9;0.548627!10829-111D1;0.671912!10830-111D2;0.715116!10831-111D3;0.243511!10832-111D4;0.181517!10833-111D5;0.481003!10764-110E8;0.388532!10770-110F5;0.104608!10399-106A3;0.36842!10400-106A4;0.523415!10405-106A9;0.488753!10834-111D6;0.557462!10835-111D7;0.663587!10836-111D8;0.42158!10837-111D9;0.353257!10699-109G6;0.613244!10802-111A1;0.450591!10796-110I4;0.0875701!10010-101C1;0.0814749!10810-111A9;0.457817!10421-106C7;0.243543!10708-109H6;0.23886!12235-129G3;0.229459!12236-129G4;0.349071!12237-129G5;0.550445!10167-103B5;0.27471!10151-102I7;0.322848!10428-106D5;0.462688!10795-110I3;0.533981!10805-111A4;0.348435!10052-101G7;0.265623!10189-103D9;0.61126!10589-108D4;0.839888!10425-106D2;0.263212!10427-106D4;0.905618!10702-109G9;0.523204!10432-106D9;0.00829105!10496-107C1;0.118524!10718-109I7;0.147244!10011-101C2;0.536507!10053-101G8;0.421413!10686-109F2;0.821241!10084-102B3;0.721218!10012-101C3;0.587799!10085-102B4;0.388579!10482-107A5;0.166509!10419-106C5;0.0475529!10080-102A8;0.0547191!10760-110E4;0.8214!10709-109H7;0.118404!10710-109H8;0.0701978!10703-109H1;0.133153!10719-109I8;0.849214!10642-109A3;0.899916!10177-103C6;0.346515!10164-103B2;0.680134!10173-103C2;0.655001!10166-103B4;0.617455!10083-102B2;0.489062!10188-103D8;0.437797!10552-107I3;0.438831!10553-107I4;0.195517!10013-101C4;0.0663115!10536-107G5;0.564927!10618-108G6;0.657116!10423-106C9;0.144087!10785-110H2;0.290124!12238-129G6;0.252036!12239-129G7;0.87774!12240-129G8;0.0571994!10416-106C2;0.805911!10801-110I9;0.487957!10766-110F1;0.256723!10824-111C5;0.113973!10825-111C6;0.555097!10826-111C7;0.622037!10454-106G4;0.622222!10409-106B4;0.642287!10638-108I8;0.110083!10636-108I6;0.0987778!10513-107D9;0.0707403!10420-106C6;0.0480182!10082-102B1;0.206501!10014-101C5;0.544339!10070-101I7;0.683653!10452-106G2;0.957223!10453-106G3;0.459182!10449-106F8;0.603467!10042-101F6;0.51034!10069-101I6;0.686715!10193-103E4;0.593657!10631-108I1;0.6049!10438-106E6;0.432241!10488-107B2;0.124155!10196-103E7;0.333481!10071-101I8;0.802395!10071-101I8;0.887554!10041-101F5;0.178137!10451-106G1;0.240503!10450-106F9;0.464359!10604-108F1;0.186846!10605-108F2;0.248713!10606-108F3;0.612006!10603-108E9;0.379779!10497-107C2;0.391972!10448-106F7;0.160261!10643-109A4;0.377994!10426-106D3;0.0773416!10431-106D8;0.0688921!10197-103E8;0.0507068!10443-106F2;0.782082!10815-111B5;0.00758494!10816-111B6;0.0778652!10817-111B7;0.0735355!10015-101C6;0.0598765!10410-106B5;0.955775!10054-101G9;0.841265!10758-110E2;0.339284!10711-109H9;0.710768!10040-101F4;0.960298!10470-106I2;0.424758!10415-106C1;0.0506014!10198-103E9;0.341119!10614-108G2;0.851042!10612-108F9;0.362242!10549-107H9;0.0839004!10615-108G3;0.219842!10487-107B1;0.416494!10433-106E1;0.22505!10688-109F4;0.144255!10444-106F3;0.0876864!10444-106F3;0.720907!10485-107A8;0.831675!10413-106B8;0.729595!10175-103C4;0.87717!10161-103A8;0.679453!12131-128D7;0.552362!10624-108H3;0.040972!10712-109I1;0.865648!10205-103F7;0.299951!10206-103F8;0.383476!10207-103F9;0.531742!10050-101G5;0.355027!10051-101G6;0.74467!10016-101C7;0.694041!10046-101G1;0.650581!10778-110G4;0.396789!10633-108I3;0.00972545!10818-111B8;0.0769556!10819-111B9;0.0905172!10820-111C1;0.0891189!10484-107A7;0.0961775!10808-111A7;0.0232698!10169-103B7;0.654503!10153-102I9;0.437641!13425-144D5;0.487885!13433-144E4;0.471034!13437-144E8;0.526908!11904-125F5;0.583403!11905-125F6;0.131433!10039-101F3;0.0995317!10791-110H8;0.414604!10017-101C8;0.0612769!10045-101F9;0.333755!10509-107D5;0.624412!10839-111E2;0.0998908!10692-109F8;0.64259!10079-102A7;0.370812!10078-102A6;0.347541!10721-110A1;0.692672!10569-108B2;0.229912!10570-108B3;0.0985298!10571-108B4;0.00845566!10647-109A8;0.0266553!10752-110D5;0.422698!10782-110G8;0.235211!10726-110A6;0.282738!10018-101C9;0.588178!10086-102B5;0.888658!10182-103D2;0.483716!10165-103B3;0.431391!10499-107C4;0.417853!10408-106B3;0.0212032!10019-101D1;0.10648!10068-101I5;0.692699!10075-102A3;0.620997!10077-102A5;0.901196!10727-110A7;0.138048!10775-110G1;0.386292!10412-106B7;0.166353!12231-129F8;0.109816!12232-129F9;0.634753!12233-129G1;0.576754!12234-129G2;0.67103!10414-106B9;0.51945!10170-103B8;0.349915!10183-103D3;0.380057!10150-102I6;0.348275!10174-103C3;0.433061!10155-103A2;0.509659!10038-101F2;0.555442!10838-111E1;0.47763!10759-110E3;0.768361!10514-107E1;0.1282!10465-106H6;0.267441!10691-109F7;0.968062!10843-111E6;0.847396!10844-111E7;0.345256!11747-123G1;0.744508!11748-123G2;0.0722339!11749-123G3;0.0227665!11750-123G4;0.0286803!11751-123G5;0.0277358!11840-124H4;0.0143473!11752-123G6;0.0323656!11753-123G7;0.00325073!11754-123G8;0.0367739!11755-123G9;0.0547436!11756-123H1;0.0899531!11833-124G6;0.00783296!11760-123H5;0.00157467!11836-124G9;0.00524624!11758-123H3;0.0157778!11835-124G8;0.00020437!11762-123H7;0.000565965!11838-124H2;0.00106021!11757-123H2;4.48812e-05!11759-123H4;0.046228!11761-123H6;0.0460037!11842-124H6;0.0010407!11837-124H1;0.00755484!10568-108B1;0.000653191!13230-141I8;0.573256!13231-141I9;0.0238979!10696-109G3;0.0380809!10493-107B7;0.533957!10494-107B8;0.552819!10850-111F4;0.309659!10851-111F5;0.79579!10852-111F6;0.991583!10853-111F7;0.91055!10854-111F8;0.495994!10855-111F9;0.39564!10856-111G1;0.809559!10847-111F1;0.221411!10846-111E9;0.271689!10848-111F2;0.210498!10845-111E8;0.211762!10857-111G2;0.0363261!10858-111G3;0.0928044!10156-103A3;0.339309!11901-125F2;0.45386!11902-125F3;0.0190771!11903-125F4;0.0214912!10689-109F5;0.0180602!10648-109A9;0.748706!10784-110H1;0.45688!10744-110C6;0.126879!10772-110F7;0.247647!10474-106I6;0.499228!10600-108E6;0.404479!10684-109E9;0.702061!12226-129F3;0.362689!12227-129F4;0.321671!10508-107D4;0.572509!10539-107G8;0.154964!10607-108F4;0.405734!10555-107I6;0.69679!10774-110F9;0.358707!10637-108I7;0.610883!10663-109C6;0.981612!10728-110A8;0.887222!10729-110A9;0.639333!10430-106D7;0.119591!10730-110B1;0.228034!10813-111B3;0.251552!10812-111B2;0.102465!10037-101F1;0.312567!10172-103C1;0.488843!10163-103B1;0.416721!10076-102A4;0.506435!10073-102A1;0.425558!10036-101E9;0.1674!10195-103E6;0.471033!10277-104E7;0.38389!10434-106E2;0.431291!10550-107I1;0.0464895!10545-107H5;0.0199697!10544-107H4;0.137881!10704-109H2;0.0979389!10510-107D6;0.15059!10558-107I9;0.624348!10020-101D2;0.786654!10732-110B3;0.289962!10049-101G4;0.558851!10698-109G5;0.769238!10437-106E5;0.237207!10417-106C3;0.159944!10035-101E8;0.0717446!10171-103B9;0.458823!10157-103A4;0.503235!10034-101E7;0.441497!10072-101I9;0.453991!10199-103F1;0.211553!10200-103F2;0.766282!10697-109G4;0.668957!10723-110A3;0.504768!10179-103C8;0.162888!10160-103A7;0.338044!10180-103C9;0.32035!10162-103A9;0.542819!10021-101D3;0.631157!10840-111E3;0.664674!10706-109H4;0.789768!10033-101E6;0.298127!10032-101E5;0.337178!10490-107B4;0.448897!10439-106E7;0.0426602!10022-101D4;0.0786455!10176-103C5;0.617284!10469-106I1;0.676764!10067-101I4;0.125363!10411-106B6;0.381815!10471-106I3;0.0101848!10030-101E3;0.0730458!10475-106I7;0.383833!10787-110H4;0.600804!10477-106I9;0.324741!10695-109G2;0.646618!11771-123I7;0.197864!11772-123I8;0.0872014!11773-123I9;0.0291122!10093-102C3;0.0716271!10442-106F1;0.759351!10442-106F1;0.327718!10201-103F3;0.390012!10639-108I9;0.878228!11843-124H7;0.14408!11841-124H5;0.0584256!10693-109F9;0.120024!10436-106E4;0.0611895!10483-107A6;0.0980707!10282-104F3;0.107898!10023-101D5;0.822654!10066-101I3;0.918215!10065-101I2;0.278695!10800-110I8;0.605186!10610-108F7;0.445982!10841-111E4;0.449871!10541-107H1;0.330843!10842-111E5;0.258489!10562-108A4;0.869467!10024-101D6;0.667186!10064-101I1;0.535742!10609-108F6;0.936601!10048-101G3;0.424581!10781-110G7;0.282269!10181-103D1;0.386139!10159-103A6;0.380521!10056-101H2;0.495476!10737-110B8;0.243717!10025-101D7;0.0906605!10044-101F8;0.460577!10424-106D1;0.343864!10463-106H4;0.182741!10616-108G4;0.137456!10486-107A9;0.203655!10062-101H8;0.0895959!10202-103F4;0.940638!10158-103A5;0.728215!10441-106E9;0.476827!10031-101E4;0.608177!10063-101H9;0.449468!10063-101H9;0.20288!11763-123H8;0.67463!11765-123I1;0.0614153!11768-123I4;0.0918232!10807-111A6;0.043734!10790-110H7;0.594265!10798-110I6;0.263149!10786-110H3;0.906495!10591-108D6;0.340132!10593-108D8;0.235996!10590-108D5;0.135483!10026-101D8;0.176858!10096-102C6;0.939545!10168-103B6;0.113097!10154-103A1;0.535052!10209-103G2;0.631633!10061-101H7;0.903095!10027-101D9;0.866332!10043-101F7;0.109182!10783-110G9;0.388475!10028-101E1;0.584903!10060-101H6;0.686879!10203-103F5;0.891032!10059-101H5;0.908097!10047-101G2;0.832003!10029-101E2;0.580526!10058-101H4;0.864708!10418-106C4;0.767909!10492-107B6;0.152132!10694-109G1;0.0878641!10797-110I5;0.410345!10057-101H3;0.0132859!10100-102D1;0.675452!10055-101H1;0.448513!10204-103F6;0.445468!10191-103E2;0.503736!10563-108A5;0.61523
|name=motif_CNGATG
|name=motif_CNGATG
|tomtom_result=Gata1#MA0035.1;-1;0.00410561;1.95427;1;5;CAGATG;GGATGG;+!TAL1::TCF3#MA0091.1;2;0.00432187;2.05721;1;6;CAGATG;AACAGATGGTCG;-!GATA2#MA0036.1;-1;0.0067897;3.2319;1;5;CAGATG;GGATA;+!ASH1#MA0276.1;1;0.00999414;4.75721;1;6;CAGATG;CCCGATCCGG;-!Myb#MA0100.1;2;0.0108105;5.14579;1;6;CAGATG;GGCCGTTG;+!sna#MA0086.1;0;0.0182705;8.69677;1;6;CAGATG;CAGGTG;+
}}
}}

Latest revision as of 13:14, 7 September 2012

Full Name: motif_CNGATG

Motif matrix
POACGT
010134400
02336336336336
030013440
041344000
050001344
060013440

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Gata1#MA0035.1-10.004105611.9542715CAGATGGGATGG+
TAL1::TCF3#MA0091.120.004321872.0572116CAGATGAACAGATGGTCG-
GATA2#MA0036.1-10.00678973.231915CAGATGGGATA+
ASH1#MA0276.110.009994144.7572116CAGATGCCCGATCCGG-
Myb#MA0100.120.01081055.1457916CAGATGGGCCGTTG+
sna#MA0086.100.01827058.6967716CAGATGCAGGTG+
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