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MacroAPE 1083:Motif313: Difference between revisions

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727239!10464-106H5;0.111307!10827-111C8;0.113784!10789-110H6;0.143515!10828-111C9;0.242341!10788-110H5;0.0938398!10792-110H9;0.17354!10765-110E9;0.112464!10829-111D1;0.1458!10830-111D2;0.0935766!10831-111D3;0.0927722!10832-111D4;0.029027!10833-111D5;0.135324!10764-110E8;0.0988356!10770-110F5;0.0485318!10399-106A3;0.0992473!10400-106A4;0.0459011!10405-106A9;0.0385835!10834-111D6;0.0343169!10835-111D7;0.0964239!10836-111D8;0.10472!10837-111D9;0.283877!10699-109G6;0.231724!10802-111A1;0.338611!10796-110I4;0.2373!10010-101C1;0.052033!10810-111A9;0.0366159!10421-106C7;0.134256!10708-109H6;0.358257!12235-129G3;0.0177965!12236-129G4;0.789294!12237-129G5;0.470516!10167-103B5;0.816056!10151-102I7;0.163981!10428-106D5;0.0468622!10795-110I3;0.0905396!10805-111A4;0.0807056!10052-101G7;0.0714253!10189-103D9;0.0338949!10589-108D4;0.00139436!10425-106D2;0.176049!10427-106D4;0.586395!10702-109G9;0.209442!10432-106D9;0.23945!10496-107C1;0.0310861!10718-109I7;0.0705902!10011-101C2;0.102791!10053-101G8;0.0216924!10686-109F2;0.141299!10084-102B3;0.887284!10012-101C3;0.00966128!10085-102B4;0.0248566!10482-107A5;0.396494!10419-106C5;0.0187342!10080-102A8;0.01117!10760-110E4;0.0770264!10709-109H7;0.00894706!10710-109H8;0.0203469!10703-109H1;0.0322424!10719-109I8;0.0780611!10642-109A3;0.0866625!10177-103C6;0.0889749!10164-103B2;0.0505516!10173-103C2;0.0531968!10166-103B4;0.532043!10083-102B2;0.468628!10188-103D8;0.417021!10552-107I3;0.0187111!10553-107I4;0.0394356!10013-101C4;0.00794731!10536-107G5;0.0196316!10618-108G6;0.101946!10423-106C9;0.0670556!10785-110H2;0.0103591!12238-129G6;0.0307742!12239-129G7;0.103615!12240-129G8;0.282094!10416-106C2;0.097945!10801-110I9;0.0905588!10766-110F1;0.0878022!10824-111C5;0.220285!10825-111C6;0.115017!10826-111C7;0.123083!10454-106G4;0.120889!10409-106B4;0.109505!10638-108I8;0.0614557!10636-108I6;0.00434927!10513-107D9;0.0334663!10420-106C6;0.0577861!10082-102B1;0.0645218!10014-101C5;0.00906806!10070-101I7;0.00753966!10452-106G2;0.0132071!10453-106G3;0.0693713!10449-106F8;0.0648257!10042-101F6;0.0684556!10069-101I6;0.00491063!10193-103E4;0.0199808!10631-108I1;0.0180717!10438-106E6;0.0745529!10488-107B2;0.0307165!10196-103E7;0.0528867!10071-101I8;0.0497632!10071-101I8;0.00756751!10041-101F5;0.901763!10451-106G1;0.0206191!10450-106F9;0.0362939!10604-108F1;0.0315789!10605-108F2;0.060972!10606-108F3;0.0432247!10603-108E9;0.0699504!10497-107C2;0.0545719!10448-106F7;0.14354!10643-109A4;0.0123465!10426-106D3;0.00990207!10431-106D8;0.00739532!10197-103E8;0.00692138!10443-106F2;0.0190472!10815-111B5;0.419171!10816-111B6;0.0201706!10817-111B7;0.0176702!10015-101C6;0.0205395!10410-106B5;0.0173769!10054-101G9;0.0126018!10758-110E2;0.0204023!10711-109H9;0.0390048!10040-101F4;0.0118744!10470-106I2;0.0564709!10415-106C1;0.0129825!10198-103E9;0.179584!10614-108G2;0.00998317!10612-108F9;0.0218484!10549-107H9;0.0538883!10615-108G3;0.0480321!10487-107B1;0.0629192!10433-106E1;0.0691398!10688-109F4;0.0284344!10444-106F3;0.0308605!10444-106F3;0.210732!10485-107A8;0.21433!10413-106B8;0.00262802!10175-103C4;0.0568057!10161-103A8;0.0226213!12131-128D7;0.00809851!10624-108H3;0.534155!10712-109I1;0.956755!10205-103F7;0.232415!10206-103F8;0.0143691!10207-103F9;0.0207585!10050-101G5;0.0349938!10051-101G6;0.0259147!10016-101C7;0.0176581!10046-101G1;0.0176233!10778-110G4;0.0271512!10633-108I3;0.0634076!10818-111B8;0.338127!10819-111B9;0.25591!10820-111C1;0.243802!10484-107A7;0.212606!10808-111A7;0.0074342!10169-103B7;0.171934!10153-102I9;0.0577554!13425-144D5;0.0238115!13433-144E4;0.171211!13437-144E8;0.182212!11904-125F5;0.184577!11905-125F6;0.434314!10039-101F3;0.397075!10791-110H8;0.051582!10017-101C8;0.0135082!10045-101F9;0.0195283!10509-107D5;0.0513845!10839-111E2;0.0391025!10692-109F8;0.0151557!10079-102A7;0.00443549!10078-102A6;0.0251783!10721-110A1;0.0271473!10569-108B2;0.0462991!10570-108B3;0.202921!10571-108B4;0.356202!10647-109A8;0.235349!10752-110D5;0.11849!10782-110G8;0.0472551!10726-110A6;0.803193!10018-101C9;0.00135728!10086-102B5;0.0111023!10182-103D2;0.061982!10165-103B3;0.0254576!10499-107C4;0.0100573!10408-106B3;0.0389511!10019-101D1;0.113034!10068-101I5;0.0275794!10075-102A3;0.0365486!10077-102A5;0.0200132!10727-110A7;0.00467664!10775-110G1;0.0686437!10412-106B7;0.108239!12231-129F8;0.11006!12232-129F9;0.590116!12233-129G1;0.342707!12234-129G2;0.397025!10414-106B9;0.968033!10170-103B8;0.0689923!10183-103D3;0.154265!10150-102I6;0.0857978!10174-103C3;0.0427139!10155-103A2;0.00718393!10038-101F2;0.0131525!10838-111E1;0.00584726!10759-110E3;0.0112054!10514-107E1;0.0293176!10465-106H6;0.0593756!10691-109F7;0.087102!10843-111E6;0.239353!10844-111E7;0.0441588!11747-123G1;0.0454107!11748-123G2;0.508698!11749-123G3;0.860304!11750-123G4;0.752235!11751-123G5;0.661329!11840-124H4;0.813835!11752-123G6;0.375234!11753-123G7;0.776823!11754-123G8;0.376445!11755-123G9;0.993923!11756-123H1;0.384008!11833-124G6;0.803557!11760-123H5;0.814169!11836-124G9;0.694834!11758-123H3;0.55725!11835-124G8;0.874514!11762-123H7;0.35263!11838-124H2;0.167486!11757-123H2;0.189324!11759-123H4;0.490681!11761-123H6;0.662822!11842-124H6;0.205465!11837-124H1;0.617624!10568-108B1;0.272304!13230-141I8;0.37237!13231-141I9;0.377407!10696-109G3;0.383387!10493-107B7;0.33205!10494-107B8;0.058533!10850-111F4;0.182501!10851-111F5;0.0342463!10852-111F6;0.142545!10853-111F7;0.562184!10854-111F8;0.00251608!10855-111F9;0.0191661!10856-111G1;0.87065!10847-111F1;0.163115!10846-111E9;0.0159312!10848-111F2;0.0257131!10845-111E8;0.0145614!10857-111G2;0.0270098!10858-111G3;0.0235012!10156-103A3;0.00176054!11901-125F2;0.0361539!11902-125F3;0.476693!11903-125F4;0.495075!10689-109F5;0.4032!10648-109A9;0.0105529!10784-110H1;0.000627352!10744-110C6;0.0131426!10772-110F7;0.191432!10474-106I6;0.0871472!10600-108E6;0.163061!10684-109E9;0.60394!12226-129F3;0.102236!12227-129F4;0.00576893!10508-107D4;0.173996!10539-107G8;0.0550922!10607-108F4;0.0442258!10555-107I6;0.0491865!10774-110F9;0.0339754!10637-108I7;0.0442721!10663-109C6;0.0422168!10728-110A8;0.0754706!10729-110A9;0.0853828!10430-106D7;0.27231!10730-110B1;0.0558152!10813-111B3;0.0218182!10812-111B2;0.170197!10037-101F1;0.126494!10172-103C1;0.0337668!10163-103B1;0.255617!10076-102A4;0.0367707!10073-102A1;0.0391862!10036-101E9;0.90036!10195-103E6;0.0272124!10277-104E7;0.0337997!10434-106E2;0.0119394!10550-107I1;0.0416368!10545-107H5;0.0466941!10544-107H4;0.00719809!10704-109H2;0.000444729!10510-107D6;0.128555!10558-107I9;0.0707072!10020-101D2;0.241044!10732-110B3;0.0145819!10049-101G4;0.898061!10698-109G5;0.0539753!10437-106E5;0.0602778!10417-106C3;0.0248325!10035-101E8;0.0202165!10171-103B9;0.0457091!10157-103A4;0.159369!10034-101E7;0.0494185!10072-101I9;0.0313431!10199-103F1;0.899357!10200-103F2;0.0147034!10697-109G4;0.0262356!10723-110A3;0.1792!10179-103C8;0.0153082!10160-103A7;0.00786037!10180-103C9;0.0523874!10162-103A9;0.121123!10021-101D3;0.418212!10840-111E3;0.0144438!10706-109H4;0.234034!10033-101E6;0.017575!10032-101E5;0.021997!10490-107B4;0.0298691!10439-106E7;0.020704!10022-101D4;0.0166991!10176-103C5;0.0212045!10469-106I1;0.116268!10067-101I4;0.0772326!10411-106B6;0.0374119!10471-106I3;0.0528791!10030-101E3;0.0447853!10475-106I7;0.0131659!10787-110H4;0.0367851!10477-106I9;0.06183!10695-109G2;0.156951!11771-123I7;0.105412!11772-123I8;0.006051!11773-123I9;0.14733!10093-102C3;0.758034!10442-106F1;0.00214551!10442-106F1;0.0481583!10201-103F3;0.049014!10639-108I9;0.0220257!11843-124H7;0.0348827!11841-124H5;0.0200176!10693-109F9;0.018783!10436-106E4;0.0435427!10483-107A6;0.0266602!10282-104F3;0.142844!10023-101D5;0.0504452!10066-101I3;0.0828978!10065-101I2;0.0400349!10800-110I8;0.026433!10610-108F7;0.0274027!10841-111E4;0.0326731!10541-107H1;0.0969836!10842-111E5;0.0347503!10562-108A4;0.0579531!10024-101D6;0.0534253!10064-101I1;0.00394472!10609-108F6;0.0113126!10048-101G3;0.0702986!10781-110G7;0.016675!10181-103D1;0.223643!10159-103A6;0.00811765!10056-101H2;0.00756691!10737-110B8;0.0154061!10025-101D7;0.489804!10044-101F8;0.00345413!10424-106D1;0.00540967!10463-106H4;0.331705!10616-108G4;0.0330751!10486-107A9;0.113445!10062-101H8;0.0465069!10202-103F4;0.0127717!10158-103A5;0.00427491!10441-106E9;0.00556736!10031-101E4;0.0211662!10063-101H9;0.01796!10063-101H9;0.855719!11763-123H8;0.00687522!11765-123I1;0.210156!11768-123I4;0.23205!10807-111A6;0.39339!10790-110H7;0.125014!10798-110I6;0.0703908!10786-110H3;0.264468!10591-108D6;0.0884637!10593-108D8;0.132103!10590-108D5;0.050997!10026-101D8;0.0400806!10096-102C6;0.445131!10168-103B6;0.195044!10154-103A1;0.0299078!10209-103G2;0.0143774!10061-101H7;0.0152797!10027-101D9;0.0274968!10043-101F7;0.443657!10783-110G9;0.00521845!10028-101E1;0.124128!10060-101H6;0.0452539!10203-103F5;0.0192613!10059-101H5;0.0282812!10047-101G2;0.0341485!10029-101E2;0.00300914!10058-101H4;0.0135286!10418-106C4;0.0189575!10492-107B6;0.0241486!10694-109G1;0.00727644!10797-110I5;0.367693!10057-101H3;0.0892665!10100-102D1;0.0203756!10055-101H1;0.0174276!10204-103F6;0.0892788!10191-103E2;0.0609475!10563-108A5;0.00947346
|name=motif313
|name=motif313
|tomtom_result=brk#MA0213.1;0;0.00315258;1.50063;1;8;AGCCCCAG;GGCGCCAG;-!TBF1#MA0403.1;0;0.00539377;2.56743;1;8;AGCCCCAG;AACCCTAA;+!MET28#MA0332.1;-2;0.00572232;2.72382;1;6;AGCCCCAG;CCACAG;-!MET32#MA0334.1;0;0.00660013;3.14166;1;7;AGCCCCAG;CGCCACA;+!RUNX1#MA0002.2;1;0.00745793;3.54997;1;8;AGCCCCAG;AAACCACAGAC;-!MIG1#MA0337.1;-1;0.0081174;3.86388;1;7;AGCCCCAG;CCCCCGC;+!Macho-1#MA0118.1;1;0.0103726;4.93734;1;8;AGCCCCAG;GAACCCCCA;-!TFAP2A#MA0003.1;-1;0.0116117;5.52717;1;7;AGCCCCAG;GCCCGGGGG;+!BAS1#MA0278.1;4;0.0125777;5.98697;1;8;AGCCCCAG;GCACAGCCAGAGTCAAGTCAA;+!ADR1#MA0268.1;-1;0.0140482;6.68693;1;7;AGCCCCAG;ACCCCAC;+!Zfx#MA0146.1;1;0.0151617;7.21696;1;8;AGCCCCAG;CAGGCCTCGGCCCC;-!PPARG::RXRA#MA0065.2;7;0.0153526;7.30785;1;8;AGCCCCAG;TGACCTTTGCCCTAC;-!MET31#MA0333.1;0;0.0198797;9.46274;1;8;AGCCCCAG;CGCCACACT;-!EBF1#MA0154.1;-1;0.0206669;9.83746;1;7;AGCCCCAG;ACCCAAGGGA;+
}}
}}

Latest revision as of 13:14, 7 September 2012

Full Name: motif313

Motif matrix
POACGT
0115119501426810520
0213517102361438608370
0320440975453349724501
04700715484256028532
05202681284281014017147
06440916612931512294
07157086518759787732
08398449861641312882

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
brk#MA0213.100.003152581.5006318AGCCCCAGGGCGCCAG-
TBF1#MA0403.100.005393772.5674318AGCCCCAGAACCCTAA+
MET28#MA0332.1-20.005722322.7238216AGCCCCAGCCACAG-
MET32#MA0334.100.006600133.1416617AGCCCCAGCGCCACA+
RUNX1#MA0002.210.007457933.5499718AGCCCCAGAAACCACAGAC-
MIG1#MA0337.1-10.00811743.8638817AGCCCCAGCCCCCGC+
Macho-1#MA0118.110.01037264.9373418AGCCCCAGGAACCCCCA-
TFAP2A#MA0003.1-10.01161175.5271717AGCCCCAGGCCCGGGGG+
BAS1#MA0278.140.01257775.9869718AGCCCCAGGCACAGCCAGAGTCAAGTCAA+
ADR1#MA0268.1-10.01404826.6869317AGCCCCAGACCCCAC+
Zfx#MA0146.110.01516177.2169618AGCCCCAGCAGGCCTCGGCCCC-
PPARG::RXRA#MA0065.270.01535267.3078518AGCCCCAGTGACCTTTGCCCTAC-
MET31#MA0333.100.01987979.4627418AGCCCCAGCGCCACACT-
EBF1#MA0154.1-10.02066699.8374617AGCCCCAGACCCAAGGGA+
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