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MacroAPE 1083:Motif57: Difference between revisions

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10H5;0.997856!10792-110H9;0.996521!10765-110E9;0.949147!10829-111D1;0.952138!10830-111D2;0.867105!10831-111D3;0.879237!10832-111D4;0.934123!10833-111D5;0.866633!10764-110E8;0.983941!10770-110F5;0.953801!10399-106A3;0.602461!10400-106A4;0.865181!10405-106A9;0.829153!10834-111D6;0.949014!10835-111D7;0.772628!10836-111D8;0.731728!10837-111D9;0.851911!10699-109G6;0.738183!10802-111A1;0.401591!10796-110I4;0.418594!10010-101C1;0.894939!10810-111A9;0.550889!10421-106C7;0.269281!10708-109H6;0.905856!12235-129G3;0.498942!12236-129G4;0.470681!12237-129G5;0.309948!10167-103B5;0.481635!10151-102I7;0.751868!10428-106D5;0.998365!10795-110I3;0.499317!10805-111A4;0.926193!10052-101G7;0.215237!10189-103D9;0.316079!10589-108D4;0.40095!10425-106D2;0.28909!10427-106D4;0.374963!10702-109G9;0.658982!10432-106D9;0.752773!10496-107C1;0.511725!10718-109I7;0.957483!10011-101C2;0.711784!10053-101G8;0.56214!10686-109F2;0.0841009!10084-102B3;0.0472965!10012-101C3;0.922362!10085-102B4;0.972658!10482-107A5;0.54952!10419-106C5;0.0890906!10080-102A8;0.42628!10760-110E4;0.781948!10709-109H7;0.952776!10710-109H8;0.752806!10703-109H1;0.780641!10719-109I8;0.209327!10642-109A3;0.377017!10177-103C6;0.152247!10164-103B2;0.985353!10173-103C2;0.922679!10166-103B4;0.344534!10083-102B2;0.499794!10188-103D8;0.637659!10552-107I3;0.803268!10553-107I4;0.608398!10013-101C4;0.350543!10536-107G5;0.434786!10618-108G6;0.60803!10423-106C9;0.000537658!10785-110H2;0.00466652!12238-129G6;0.011482!12239-129G7;0.717088!12240-129G8;0.961025!10416-106C2;0.735638!10801-110I9;0.901099!10766-110F1;0.66785!10824-111C5;0.893659!10825-111C6;0.425991!10826-111C7;0.459384!10454-106G4;0.414079!10409-106B4;0.494701!10638-108I8;0.968172!10636-108I6;0.810032!10513-107D9;0.934673!10420-106C6;0.0726079!10082-102B1;0.204576!10014-101C5;0.501298!10070-101I7;0.390658!10452-106G2;0.470466!10453-106G3;0.229315!10449-106F8;0.254885!10042-101F6;0.218237!10069-101I6;0.349127!10193-103E4;0.661487!10631-108I1;0.911994!10438-106E6;0.824694!10488-107B2;0.737861!10196-103E7;0.508151!10071-101I8;0.767253!10071-101I8;0.498977!10041-101F5;0.302399!10451-106G1;0.47396!10450-106F9;0.0610625!10604-108F1;0.117201!10605-108F2;0.458985!10606-108F3;0.948019!10603-108E9;0.68197!10497-107C2;0.31499!10448-106F7;0.597685!10643-109A4;0.989957!10426-106D3;0.911931!10431-106D8;0.685966!10197-103E8;0.963867!10443-106F2;0.28446!10815-111B5;0.391749!10816-111B6;0.980405!10817-111B7;0.784809!10015-101C6;0.945689!10410-106B5;0.392133!10054-101G9;0.189797!10758-110E2;0.464112!10711-109H9;0.659779!10040-101F4;0.272359!10470-106I2;0.833049!10415-106C1;0.46985!10198-103E9;0.572344!10614-108G2;0.201551!10612-108F9;0.613629!10549-107H9;0.580972!10615-108G3;0.27495!10487-107B1;0.105428!10433-106E1;0.938402!10688-109F4;0.99355!10444-106F3;0.742219!10444-106F3;0.596703!10485-107A8;0.652411!10413-106B8;0.217476!10175-103C4;0.028716!10161-103A8;0.859734!12131-128D7;0.559511!10624-108H3;0.57509!10712-109I1;0.791443!10205-103F7;0.981274!10206-103F8;0.344328!10207-103F9;0.438483!10050-101G5;0.782545!10051-101G6;0.703259!10016-101C7;0.710207!10046-101G1;0.809726!10778-110G4;0.937695!10633-108I3;0.59639!10818-111B8;0.00835531!10819-111B9;0.951698!10820-111C1;0.917755!10484-107A7;0.915166!10808-111A7;0.138986!10169-103B7;0.541696!10153-102I9;0.704777!13425-144D5;0.913514!13433-144E4;0.285708!13437-144E8;0.421869!11904-125F5;0.484923!11905-125F6;0.585659!10039-101F3;0.704308!10791-110H8;0.888855!10017-101C8;0.210121!10045-101F9;0.321286!10509-107D5;0.732936!10839-111E2;0.151558!10692-109F8;0.341279!10079-102A7;0.580688!10078-102A6;0.491107!10721-110A1;0.939388!10569-108B2;0.506558!10570-108B3;0.261595!10571-108B4;0.608096!10647-109A8;0.703552!10752-110D5;0.125255!10782-110G8;0.692616!10726-110A6;0.176487!10018-101C9;0.0944155!10086-102B5;0.367991!10182-103D2;0.22993!10165-103B3;0.971683!10499-107C4;0.730403!10408-106B3;0.735399!10019-101D1;0.989958!10068-101I5;0.239139!10075-102A3;0.725385!10077-102A5;0.27094!10727-110A7;0.153626!10775-110G1;0.666619!10412-106B7;0.899454!12231-129F8;0.902575!12232-129F9;0.31911!12233-129G1;0.47899!12234-129G2;0.454762!10414-106B9;0.164843!10170-103B8;0.061931!10183-103D3;0.508691!10150-102I6;0.731619!10174-103C3;0.858296!10155-103A2;0.607211!10038-101F2;0.497437!10838-111E1;0.488032!10759-110E3;0.457417!10514-107E1;0.539102!10465-106H6;0.19083!10691-109F7;0.518944!10843-111E6;0.386332!10844-111E7;0.341921!11747-123G1;0.200338!11748-123G2;0.409584!11749-123G3;0.257882!11750-123G4;0.457224!11751-123G5;0.919712!11840-124H4;0.684417!11752-123G6;0.308887!11753-123G7;0.807592!11754-123G8;0.952203!11755-123G9;0.623354!11756-123H1;0.321732!11833-124G6;0.0626042!11760-123H5;0.173067!11836-124G9;0.105803!11758-123H3;0.788327!11835-124G8;0.637614!11762-123H7;0.930288!11838-124H2;0.40952!11757-123H2;0.685766!11759-123H4;0.544967!11761-123H6;0.14707!11842-124H6;0.701932!11837-124H1;0.486684!10568-108B1;0.92465!13230-141I8;0.64685!13231-141I9;0.852089!10696-109G3;0.886264!10493-107B7;0.690632!10494-107B8;0.0839759!10850-111F4;0.804997!10851-111F5;0.287437!10852-111F6;0.303394!10853-111F7;0.0906867!10854-111F8;0.953561!10855-111F9;0.992758!10856-111G1;0.198959!10847-111F1;0.957988!10846-111E9;0.853577!10848-111F2;0.430706!10845-111E8;0.481136!10857-111G2;0.397776!10858-111G3;0.923276!10156-103A3;0.665961!11901-125F2;0.908604!11902-125F3;0.989279!11903-125F4;0.752968!10689-109F5;0.775545!10648-109A9;0.360651!10784-110H1;0.762247!10744-110C6;0.977171!10772-110F7;0.712503!10474-106I6;0.905112!10600-108E6;0.812589!10684-109E9;0.421268!12226-129F3;0.151948!12227-129F4;0.86906!10508-107D4;0.965721!10539-107G8;0.186606!10607-108F4;0.239231!10555-107I6;0.0358805!10774-110F9;0.190294!10637-108I7;0.166894!10663-109C6;0.195922!10728-110A8;0.105873!10729-110A9;0.0347843!10430-106D7;0.448629!10730-110B1;0.590099!10813-111B3;0.536922!10812-111B2;0.251696!10037-101F1;0.618632!10172-103C1;0.936299!10163-103B1;0.637357!10076-102A4;0.931061!10073-102A1;0.75888!10036-101E9;0.222656!10195-103E6;0.946445!10277-104E7;0.939152!10434-106E2;0.628305!10550-107I1;0.600271!10545-107H5;0.126975!10544-107H4;0.839364!10704-109H2;0.704161!10510-107D6;0.902926!10558-107I9;0.409011!10020-101D2;0.36418!10732-110B3;0.693547!10049-101G4;0.803831!10698-109G5;0.633354!10437-106E5;0.00791598!10417-106C3;0.763096!10035-101E8;0.236544!10171-103B9;0.841566!10157-103A4;0.758068!10034-101E7;0.801405!10072-101I9;0.90307!10199-103F1;0.183283!10200-103F2;0.603742!10697-109G4;0.250877!10723-110A3;0.0613414!10179-103C8;0.722706!10160-103A7;0.588305!10180-103C9;0.309053!10162-103A9;0.40296!10021-101D3;0.19252!10840-111E3;0.760321!10706-109H4;0.734495!10033-101E6;0.981535!10032-101E5;0.993837!10490-107B4;0.95645!10439-106E7;0.923945!10022-101D4;0.834456!10176-103C5;0.68313!10469-106I1;0.780526!10067-101I4;0.00617933!10411-106B6;0.72107!10471-106I3;0.164265!10030-101E3;0.469273!10475-106I7;0.325285!10787-110H4;0.185338!10477-106I9;0.0940188!10695-109G2;0.153098!11771-123I7;0.417481!11772-123I8;0.634669!11773-123I9;0.747771!10093-102C3;0.43863!10442-106F1;0.427216!10442-106F1;0.109585!10201-103F3;0.091989!10639-108I9;0.947533!11843-124H7;0.427236!11841-124H5;0.473663!10693-109F9;0.653032!10436-106E4;0.690694!10483-107A6;0.815625!10282-104F3;0.600389!10023-101D5;0.803298!10066-101I3;0.811222!10065-101I2;0.680895!10800-110I8;0.571236!10610-108F7;0.201844!10841-111E4;0.173898!10541-107H1;0.329813!10842-111E5;0.0700848!10562-108A4;0.203459!10024-101D6;0.620022!10064-101I1;0.323987!10609-108F6;0.624891!10048-101G3;0.92143!10781-110G7;0.977879!10181-103D1;0.158178!10159-103A6;0.800532!10056-101H2;0.57314!10737-110B8;0.744275!10025-101D7;0.677096!10044-101F8;0.18409!10424-106D1;0.283731!10463-106H4;0.711569!10616-108G4;0.756737!10486-107A9;0.724743!10062-101H8;0.721033!10202-103F4;0.923131!10158-103A5;0.255094!10441-106E9;0.293571!10031-101E4;0.222739!10063-101H9;0.911283!10063-101H9;0.234608!11763-123H8;0.420738!11765-123I1;0.330157!11768-123I4;0.277143!10807-111A6;0.824384!10790-110H7;0.137764!10798-110I6;0.0983943!10786-110H3;0.210829!10591-108D6;0.0196826!10593-108D8;0.0414139!10590-108D5;0.0155652!10026-101D8;0.144217!10096-102C6;0.106772!10168-103B6;0.879486!10154-103A1;0.933002!10209-103G2;0.608695!10061-101H7;0.23911!10027-101D9;0.5578!10043-101F7;0.994041!10783-110G9;0.943261!10028-101E1;0.195816!10060-101H6;0.489292!10203-103F5;0.872556!10059-101H5;0.261878!10047-101G2;0.492934!10029-101E2;0.270354!10058-101H4;0.345817!10418-106C4;0.427899!10492-107B6;0.434635!10694-109G1;0.316415!10797-110I5;0.293046!10057-101H3;0.972997!10100-102D1;0.34323!10055-101H1;0.943439!10204-103F6;0.957515!10191-103E2;0.793215!10563-108A5;0.230842
|name=motif57
|name=motif57
|tomtom_result=TLX1::NFIC#MA0119.1;0;0.00027664;0.13168;0.263294;8;GGGCACAG;TGGCACCATGCCAA;+!abi4#MA0123.1;2;0.00207814;0.989196;0.706029;8;GGGCACAG;GGGGGCACCG;-!CTCF#MA0139.1;11;0.00222544;1.05931;0.706029;8;GGGCACAG;TGGCCACCAGGGGGCGCTA;+!ESR2#MA0258.1;2;0.00381473;1.81581;0.891249;8;GGGCACAG;CAGGTCACCGTGACCTTG;-!PPARG#MA0066.1;4;0.00468212;2.22869;0.891249;8;GGGCACAG;AGTAGGTCACCGTGACCTAC;-!CUP9#MA0288.1;0;0.00896791;4.26873;0.999747;8;GGGCACAG;TGACACATT;+!ESR1#MA0112.1;3;0.0128706;6.1264;0.999747;8;GGGCACAG;CCAGGTCACCGTGACCCC;+!kni#MA0451.1;6;0.0149761;7.12862;0.999747;6;GGGCACAG;AAACTAGAGCAC;+!DAL82#MA0291.1;0;0.0177104;8.43013;0.999747;8;GGGCACAG;GCGCACATT;-!PPARG::RXRA#MA0065.2;3;0.0177244;8.4368;0.999747;8;GGGCACAG;GTAGGGCAAAGGTCA;+!NFIC#MA0161.1;1;0.0177557;8.45173;0.999747;5;GGGCACAG;TTGGCA;+!NR4A2#MA0160.1;2;0.0183864;8.75191;0.999747;6;GGGCACAG;AAGGTCAC;+!usp#MA0016.1;2;0.0202679;9.64751;0.999747;8;GGGCACAG;GGGGTCACGG;+
}}
}}

Latest revision as of 13:19, 7 September 2012

Full Name: motif57

Motif matrix
POACGT
01002050715507
0200360140
0300360140
0403601400
0536014000
0603601400
07188021721200
08104310158299754

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TLX1::NFIC#MA0119.100.000276640.131680.2632948GGGCACAGTGGCACCATGCCAA+
abi4#MA0123.120.002078140.9891960.7060298GGGCACAGGGGGGCACCG-
CTCF#MA0139.1110.002225441.059310.7060298GGGCACAGTGGCCACCAGGGGGCGCTA+
ESR2#MA0258.120.003814731.815810.8912498GGGCACAGCAGGTCACCGTGACCTTG-
PPARG#MA0066.140.004682122.228690.8912498GGGCACAGAGTAGGTCACCGTGACCTAC-
CUP9#MA0288.100.008967914.268730.9997478GGGCACAGTGACACATT+
ESR1#MA0112.130.01287066.12640.9997478GGGCACAGCCAGGTCACCGTGACCCC+
kni#MA0451.160.01497617.128620.9997476GGGCACAGAAACTAGAGCAC+
DAL82#MA0291.100.01771048.430130.9997478GGGCACAGGCGCACATT-
PPARG::RXRA#MA0065.230.01772448.43680.9997478GGGCACAGGTAGGGCAAAGGTCA+
NFIC#MA0161.110.01775578.451730.9997475GGGCACAGTTGGCA+
NR4A2#MA0160.120.01838648.751910.9997476GGGCACAGAAGGTCAC+
usp#MA0016.120.02026799.647510.9997478GGGCACAGGGGGTCACGG+
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