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MacroAPE 1083:Motif CTTANG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;1088;0;0!02;0;0;0;1088!03;0;0;0;1088!04;1088;0;0;0!05;272;272;272;272!06;0;0;1088;0 |macroape_1083_sample_pvalues=11376-118A8;0.817782!1...")
 
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8-110H5;0.260099!10792-110H9;0.696915!10765-110E9;0.575606!10829-111D1;0.510799!10830-111D2;0.775854!10831-111D3;0.114134!10832-111D4;0.806233!10833-111D5;0.669114!10764-110E8;0.936182!10770-110F5;0.69933!10399-106A3;0.830684!10400-106A4;0.943296!10405-106A9;0.956768!10834-111D6;0.942759!10835-111D7;0.748071!10836-111D8;0.422451!10837-111D9;0.54311!10699-109G6;0.896841!10802-111A1;0.943539!10796-110I4;0.93985!10010-101C1;0.0994122!10810-111A9;0.40634!10421-106C7;0.915783!10708-109H6;0.477468!12235-129G3;0.910005!12236-129G4;0.360809!12237-129G5;0.705351!10167-103B5;0.64334!10151-102I7;0.974072!10428-106D5;0.911872!10795-110I3;0.633259!10805-111A4;0.874656!10052-101G7;0.617388!10189-103D9;0.563416!10589-108D4;0.700457!10425-106D2;0.977515!10427-106D4;0.726697!10702-109G9;0.796099!10432-106D9;0.598623!10496-107C1;0.943153!10718-109I7;0.782552!10011-101C2;0.57233!10053-101G8;0.413929!10686-109F2;0.415752!10084-102B3;0.419718!10012-101C3;0.993983!10085-102B4;0.979907!10482-107A5;0.895532!10419-106C5;0.909819!10080-102A8;0.829503!10760-110E4;0.263436!10709-109H7;0.927894!10710-109H8;0.944069!10703-109H1;0.381423!10719-109I8;0.576467!10642-109A3;0.333738!10177-103C6;0.362113!10164-103B2;0.983856!10173-103C2;0.933703!10166-103B4;0.852896!10083-102B2;0.976528!10188-103D8;0.898133!10552-107I3;0.909513!10553-107I4;0.980065!10013-101C4;0.485569!10536-107G5;0.773319!10618-108G6;0.0205785!10423-106C9;0.759645!10785-110H2;0.919533!12238-129G6;0.651442!12239-129G7;0.435907!12240-129G8;0.474846!10416-106C2;0.553936!10801-110I9;0.409618!10766-110F1;0.386665!10824-111C5;0.932051!10825-111C6;0.87298!10826-111C7;0.90025!10454-106G4;0.859912!10409-106B4;0.988464!10638-108I8;0.931572!10636-108I6;0.874144!10513-107D9;0.475223!10420-106C6;0.894155!10082-102B1;0.901627!10014-101C5;0.247931!10070-101I7;0.413842!10452-106G2;0.914775!10453-106G3;0.960399!10449-106F8;0.925488!10042-101F6;0.913318!10069-101I6;0.948554!10193-103E4;0.520932!10631-108I1;0.961708!10438-106E6;0.760219!10488-107B2;0.850858!10196-103E7;0.835621!10071-101I8;0.0877891!10071-101I8;0.768869!10041-101F5;0.653729!10451-106G1;0.746897!10450-106F9;0.663413!10604-108F1;0.685739!10605-108F2;0.890177!10606-108F3;0.698077!10603-108E9;0.870092!10497-107C2;0.838547!10448-106F7;0.640941!10643-109A4;0.684787!10426-106D3;0.405491!10431-106D8;0.758494!10197-103E8;0.915922!10443-106F2;0.570559!10815-111B5;0.451652!10816-111B6;0.822969!10817-111B7;0.982634!10015-101C6;0.789084!10410-106B5;0.445543!10054-101G9;0.0911698!10758-110E2;0.738265!10711-109H9;0.0210957!10040-101F4;0.515695!10470-106I2;0.981043!10415-106C1;0.937954!10198-103E9;0.402226!10614-108G2;0.667873!10612-108F9;0.992731!10549-107H9;0.724718!10615-108G3;0.741039!10487-107B1;0.252604!10433-106E1;0.541936!10688-109F4;0.279767!10444-106F3;0.756175!10444-106F3;0.123073!10485-107A8;0.126973!10413-106B8;0.521857!10175-103C4;0.987181!10161-103A8;0.97656!12131-128D7;0.787433!10624-108H3;0.806874!10712-109I1;0.13908!10205-103F7;0.567065!10206-103F8;0.348222!10207-103F9;0.256042!10050-101G5;0.295292!10051-101G6;0.0986171!10016-101C7;0.200421!10046-101G1;0.119181!10778-110G4;0.427497!10633-108I3;0.203032!10818-111B8;0.475544!10819-111B9;0.686351!10820-111C1;0.778491!10484-107A7;0.707281!10808-111A7;0.732793!10169-103B7;0.894606!10153-102I9;0.950997!13425-144D5;0.947871!13433-144E4;0.800564!13437-144E8;0.84726!11904-125F5;0.940364!11905-125F6;0.900814!10039-101F3;0.987548!10791-110H8;0.996602!10017-101C8;0.84046!10045-101F9;0.438527!10509-107D5;0.775561!10839-111E2;0.871436!10692-109F8;0.873211!10079-102A7;0.581461!10078-102A6;0.396996!10721-110A1;0.0897707!10569-108B2;0.926437!10570-108B3;0.997137!10571-108B4;0.8212!10647-109A8;0.932041!10752-110D5;0.252024!10782-110G8;0.555425!10726-110A6;0.228596!10018-101C9;0.854701!10086-102B5;0.312929!10182-103D2;0.718092!10165-103B3;0.968192!10499-107C4;0.944902!10408-106B3;0.813367!10019-101D1;0.39679!10068-101I5;0.740254!10075-102A3;0.934724!10077-102A5;0.537411!10727-110A7;0.679358!10775-110G1;0.360529!10412-106B7;0.938051!12231-129F8;0.450737!12232-129F9;0.0120921!12233-129G1;0.0256158!12234-129G2;0.0138553!10414-106B9;0.0359428!10170-103B8;0.961233!10183-103D3;0.926489!10150-102I6;0.979825!10174-103C3;0.927817!10155-103A2;0.836208!10038-101F2;0.830075!10838-111E1;0.986034!10759-110E3;0.91638!10514-107E1;0.732505!10465-106H6;0.287968!10691-109F7;0.568656!10843-111E6;0.628935!10844-111E7;0.886119!11747-123G1;0.690787!11748-123G2;0.978148!11749-123G3;0.200052!11750-123G4;0.59144!11751-123G5;0.958479!11840-124H4;0.630037!11752-123G6;0.426983!11753-123G7;0.692016!11754-123G8;0.820056!11755-123G9;0.916172!11756-123H1;0.983158!11833-124G6;0.364403!11760-123H5;0.117348!11836-124G9;0.743549!11758-123H3;0.918093!11835-124G8;0.331215!11762-123H7;0.697308!11838-124H2;0.601496!11757-123H2;0.357109!11759-123H4;0.449337!11761-123H6;0.186569!11842-124H6;0.71847!11837-124H1;0.253909!10568-108B1;0.500041!13230-141I8;0.138507!13231-141I9;0.515!10696-109G3;0.701672!10493-107B7;0.203143!10494-107B8;0.953127!10850-111F4;0.341618!10851-111F5;0.0406421!10852-111F6;0.335362!10853-111F7;0.276313!10854-111F8;0.22668!10855-111F9;0.351854!10856-111G1;0.0396398!10847-111F1;0.569419!10846-111E9;0.142364!10848-111F2;0.262829!10845-111E8;0.370601!10857-111G2;0.992423!10858-111G3;0.223008!10156-103A3;0.431631!11901-125F2;0.912261!11902-125F3;0.813991!11903-125F4;0.955158!10689-109F5;0.791497!10648-109A9;0.508005!10784-110H1;0.900903!10744-110C6;0.91714!10772-110F7;0.389979!10474-106I6;0.990727!10600-108E6;0.272125!10684-109E9;0.344804!12226-129F3;0.485539!12227-129F4;0.754558!10508-107D4;0.0801702!10539-107G8;0.908212!10607-108F4;0.734999!10555-107I6;0.934583!10774-110F9;0.983554!10637-108I7;0.944225!10663-109C6;0.832732!10728-110A8;0.385435!10729-110A9;0.888592!10430-106D7;0.351313!10730-110B1;0.800033!10813-111B3;0.33837!10812-111B2;0.274106!10037-101F1;0.96756!10172-103C1;0.941865!10163-103B1;0.977564!10076-102A4;0.842404!10073-102A1;0.836233!10036-101E9;0.705417!10195-103E6;0.97151!10277-104E7;0.968125!10434-106E2;0.865148!10550-107I1;0.406167!10545-107H5;0.796144!10544-107H4;0.637191!10704-109H2;0.363012!10510-107D6;0.308472!10558-107I9;0.300297!10020-101D2;0.955748!10732-110B3;0.542031!10049-101G4;0.277333!10698-109G5;0.863479!10437-106E5;0.916076!10417-106C3;0.87846!10035-101E8;0.893984!10171-103B9;0.988695!10157-103A4;0.854608!10034-101E7;0.898363!10072-101I9;0.977942!10199-103F1;0.70821!10200-103F2;0.198836!10697-109G4;0.339066!10723-110A3;0.39159!10179-103C8;0.802278!10160-103A7;0.495522!10180-103C9;0.629764!10162-103A9;0.909501!10021-101D3;0.909891!10840-111E3;0.312628!10706-109H4;0.850871!10033-101E6;0.163733!10032-101E5;0.992566!10490-107B4;0.979076!10439-106E7;0.968369!10022-101D4;0.741835!10176-103C5;0.383188!10469-106I1;0.933449!10067-101I4;0.547459!10411-106B6;0.788994!10471-106I3;0.106586!10030-101E3;0.949229!10475-106I7;0.563571!10787-110H4;0.873256!10477-106I9;0.217477!10695-109G2;0.912284!11771-123I7;0.467819!11772-123I8;0.632896!11773-123I9;0.73766!10093-102C3;0.750203!10442-106F1;0.29253!10442-106F1;0.0239084!10201-103F3;0.0385042!10639-108I9;0.355874!11843-124H7;0.729787!11841-124H5;0.690844!10693-109F9;0.80872!10436-106E4;0.933995!10483-107A6;0.991034!10282-104F3;0.736003!10023-101D5;0.184018!10066-101I3;0.174657!10065-101I2;0.444451!10800-110I8;0.760294!10610-108F7;0.787101!10841-111E4;0.990633!10541-107H1;0.724778!10842-111E5;0.770129!10562-108A4;0.76976!10024-101D6;0.733526!10064-101I1;0.508123!10609-108F6;0.996877!10048-101G3;0.234899!10781-110G7;0.184675!10181-103D1;0.44827!10159-103A6;0.81818!10056-101H2;0.887271!10737-110B8;0.793876!10025-101D7;0.0673247!10044-101F8;0.791248!10424-106D1;0.934384!10463-106H4;0.99219!10616-108G4;0.927995!10486-107A9;0.893756!10062-101H8;0.879608!10202-103F4;0.869071!10158-103A5;0.324407!10441-106E9;0.955255!10031-101E4;0.0880098!10063-101H9;0.972754!10063-101H9;0.570896!11763-123H8;0.967616!11765-123I1;0.675985!11768-123I4;0.899299!10807-111A6;0.683753!10790-110H7;0.809129!10798-110I6;0.518662!10786-110H3;0.995659!10591-108D6;0.903542!10593-108D8;0.689891!10590-108D5;0.783915!10026-101D8;0.989272!10096-102C6;0.297394!10168-103B6;0.471271!10154-103A1;0.984268!10209-103G2;0.876653!10061-101H7;0.481342!10027-101D9;0.487305!10043-101F7;0.52578!10783-110G9;0.764852!10028-101E1;0.352221!10060-101H6;0.125315!10203-103F5;0.146613!10059-101H5;0.329064!10047-101G2;0.278798!10029-101E2;0.547009!10058-101H4;0.731588!10418-106C4;0.712517!10492-107B6;0.825701!10694-109G1;0.514786!10797-110I5;0.671227!10057-101H3;0.678303!10100-102D1;0.230099!10055-101H1;0.466363!10204-103F6;0.916537!10191-103E2;0.259526!10563-108A5;0.488872
|name=motif_CTTANG
|name=motif_CTTANG
|tomtom_result=CIN5#MA0284.1;1;0.00679631;3.23504;1;6;CTTAAG;GATTACGTAA;-!PEND#MA0127.1;4;0.0118039;5.61865;1;6;CTTAAG;ACTTCTTATT;+!YAP6#MA0418.1;6;0.0119031;5.6659;1;6;CTTAAG;GGTCTGATTACGTAAGCGAC;+!YAP1#MA0415.1;5;0.0137025;6.52239;1;6;CTTAAG;ATTTGCTTACGTAAGCTCGT;+!THI2#MA0407.1;3;0.017956;8.54703;1;6;CTTAAG;GTTCTTAGAGTTTCC;-
}}
}}

Latest revision as of 13:28, 7 September 2012

Full Name: motif_CTTANG

Motif matrix
POACGT
010108800
020001088
030001088
041088000
05272272272272
060010880

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CIN5#MA0284.110.006796313.2350416CTTAAGGATTACGTAA-
PEND#MA0127.140.01180395.6186516CTTAAGACTTCTTATT+
YAP6#MA0418.160.01190315.665916CTTAAGGGTCTGATTACGTAAGCGAC+
YAP1#MA0415.150.01370256.5223916CTTAAGATTTGCTTACGTAAGCTCGT+
THI2#MA0407.130.0179568.5470316CTTAAGGTTCTTAGAGTTTCC-
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