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MacroAPE 1083:Motif TNGGAC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;4096!02;1024;1024;1024;1024!03;0;0;4096;0!04;0;0;4096;0!05;4096;0;0;0!06;0;4096;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.5769...")
 
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828-111C9;0.707985!10788-110H5;0.283385!10792-110H9;0.542492!10765-110E9;0.162412!10829-111D1;0.226653!10830-111D2;0.396819!10831-111D3;0.221711!10832-111D4;0.294483!10833-111D5;0.273061!10764-110E8;0.358684!10770-110F5;0.107923!10399-106A3;0.408506!10400-106A4;0.26589!10405-106A9;0.309863!10834-111D6;0.263376!10835-111D7;0.241075!10836-111D8;0.269754!10837-111D9;0.214744!10699-109G6;0.274077!10802-111A1;0.17736!10796-110I4;0.114571!10010-101C1;0.809994!10810-111A9;0.641127!10421-106C7;0.957184!10708-109H6;0.805188!12235-129G3;0.70078!12236-129G4;0.232875!12237-129G5;0.945634!10167-103B5;0.476706!10151-102I7;0.412075!10428-106D5;0.639883!10795-110I3;0.287597!10805-111A4;0.395757!10052-101G7;0.492537!10189-103D9;0.592803!10589-108D4;0.781144!10425-106D2;0.176439!10427-106D4;0.535572!10702-109G9;0.67443!10432-106D9;0.253195!10496-107C1;0.899891!10718-109I7;0.765926!10011-101C2;0.437883!10053-101G8;0.50413!10686-109F2;0.187807!10084-102B3;0.995302!10012-101C3;0.763426!10085-102B4;0.701401!10482-107A5;0.763983!10419-106C5;0.645476!10080-102A8;0.691305!10760-110E4;0.581312!10709-109H7;0.775318!10710-109H8;0.945049!10703-109H1;0.29232!10719-109I8;0.193116!10642-109A3;0.0562!10177-103C6;0.0604817!10164-103B2;0.566854!10173-103C2;0.631205!10166-103B4;0.4675!10083-102B2;0.645705!10188-103D8;0.647032!10552-107I3;0.891217!10553-107I4;0.814402!10013-101C4;0.555482!10536-107G5;0.563827!10618-108G6;0.323613!10423-106C9;0.709377!10785-110H2;0.373804!12238-129G6;0.567813!12239-129G7;0.201846!12240-129G8;0.361827!10416-106C2;0.391161!10801-110I9;0.352636!10766-110F1;0.351127!10824-111C5;0.292449!10825-111C6;0.699095!10826-111C7;0.680951!10454-106G4;0.675096!10409-106B4;0.51504!10638-108I8;0.266191!10636-108I6;0.864529!10513-107D9;0.681511!10420-106C6;0.688326!10082-102B1;0.448932!10014-101C5;0.598696!10070-101I7;0.326899!10452-106G2;0.531245!10453-106G3;0.451929!10449-106F8;0.485849!10042-101F6;0.559015!10069-101I6;0.930382!10193-103E4;0.668946!10631-108I1;0.630786!10438-106E6;0.350595!10488-107B2;0.64956!10196-103E7;0.670104!10071-101I8;0.316926!10071-101I8;0.308856!10041-101F5;0.421216!10451-106G1;0.650081!10450-106F9;0.492807!10604-108F1;0.649204!10605-108F2;0.962433!10606-108F3;0.52273!10603-108E9;0.974236!10497-107C2;0.988069!10448-106F7;0.591357!10643-109A4;0.807012!10426-106D3;0.530712!10431-106D8;0.942848!10197-103E8;0.952501!10443-106F2;0.709325!10815-111B5;0.924463!10816-111B6;0.671809!10817-111B7;0.641621!10015-101C6;0.646118!10410-106B5;0.300684!10054-101G9;0.899203!10758-110E2;0.552662!10711-109H9;0.31982!10040-101F4;0.8589!10470-106I2;0.618244!10415-106C1;0.686697!10198-103E9;0.80265!10614-108G2;0.390538!10612-108F9;0.495324!10549-107H9;0.52287!10615-108G3;0.652058!10487-107B1;0.227717!10433-106E1;0.626833!10688-109F4;0.86121!10444-106F3;0.838498!10444-106F3;0.421429!10485-107A8;0.512725!10413-106B8;0.376663!10175-103C4;0.481384!10161-103A8;0.632369!12131-128D7;0.925671!10624-108H3;0.180263!10712-109I1;0.648056!10205-103F7;0.344501!10206-103F8;0.731121!10207-103F9;0.924035!10050-101G5;0.586122!10051-101G6;0.692209!10016-101C7;0.713238!10046-101G1;0.66957!10778-110G4;0.712387!10633-108I3;0.4708!10818-111B8;0.512965!10819-111B9;0.916787!10820-111C1;0.913911!10484-107A7;0.850185!10808-111A7;0.980993!10169-103B7;0.776739!10153-102I9;0.392268!13425-144D5;0.851519!13433-144E4;0.743191!13437-144E8;0.741692!11904-125F5;0.518926!11905-125F6;0.397268!10039-101F3;0.585084!10791-110H8;0.649777!10017-101C8;0.769426!10045-101F9;0.3507!10509-107D5;0.431417!10839-111E2;0.882721!10692-109F8;0.283725!10079-102A7;0.81635!10078-102A6;0.777008!10721-110A1;0.739884!10569-108B2;0.287184!10570-108B3;0.631783!10571-108B4;0.557978!10647-109A8;0.968256!10752-110D5;0.662413!10782-110G8;0.246145!10726-110A6;0.659727!10018-101C9;0.696958!10086-102B5;0.13276!10182-103D2;0.173259!10165-103B3;0.720415!10499-107C4;0.75181!10408-106B3;0.855782!10019-101D1;0.5729!10068-101I5;0.464887!10075-102A3;0.799663!10077-102A5;0.681575!10727-110A7;0.897138!10775-110G1;0.40962!10412-106B7;0.36337!12231-129F8;0.579389!12232-129F9;0.824616!12233-129G1;0.648928!12234-129G2;0.679022!10414-106B9;0.734455!10170-103B8;0.527351!10183-103D3;0.468779!10150-102I6;0.515543!10174-103C3;0.727863!10155-103A2;0.996626!10038-101F2;0.962551!10838-111E1;0.990274!10759-110E3;0.871663!10514-107E1;0.948376!10465-106H6;0.640312!10691-109F7;0.809732!10843-111E6;0.694729!10844-111E7;0.588906!11747-123G1;0.655339!11748-123G2;0.47766!11749-123G3;0.426622!11750-123G4;0.722165!11751-123G5;0.201203!11840-124H4;0.0963429!11752-123G6;0.381993!11753-123G7;0.220511!11754-123G8;0.317052!11755-123G9;0.282734!11756-123H1;0.189442!11833-124G6;0.0533292!11760-123H5;0.131311!11836-124G9;0.142166!11758-123H3;0.559594!11835-124G8;0.0929!11762-123H7;0.339791!11838-124H2;0.0456396!11757-123H2;0.101461!11759-123H4;0.308968!11761-123H6;0.145394!11842-124H6;0.0394126!11837-124H1;0.502865!10568-108B1;0.274484!13230-141I8;0.694694!13231-141I9;0.88702!10696-109G3;0.812338!10493-107B7;0.626346!10494-107B8;0.767239!10850-111F4;0.356921!10851-111F5;0.404863!10852-111F6;0.785992!10853-111F7;0.80544!10854-111F8;0.70428!10855-111F9;0.315162!10856-111G1;0.0814232!10847-111F1;0.471165!10846-111E9;0.653964!10848-111F2;0.321945!10845-111E8;0.712921!10857-111G2;0.875709!10858-111G3;0.873633!10156-103A3;0.748066!11901-125F2;0.744982!11902-125F3;0.880031!11903-125F4;0.722316!10689-109F5;0.797359!10648-109A9;0.775151!10784-110H1;0.0766093!10744-110C6;0.483153!10772-110F7;0.201215!10474-106I6;0.416327!10600-108E6;0.108376!10684-109E9;0.704028!12226-129F3;0.781345!12227-129F4;0.572404!10508-107D4;0.877244!10539-107G8;0.051988!10607-108F4;0.238605!10555-107I6;0.900938!10774-110F9;0.283116!10637-108I7;0.866614!10663-109C6;0.559962!10728-110A8;0.445325!10729-110A9;0.450458!10430-106D7;0.618665!10730-110B1;0.580979!10813-111B3;0.0222822!10812-111B2;0.66556!10037-101F1;0.694852!10172-103C1;0.652681!10163-103B1;0.413541!10076-102A4;0.893338!10073-102A1;0.62345!10036-101E9;0.432952!10195-103E6;0.812553!10277-104E7;0.645043!10434-106E2;0.77193!10550-107I1;0.600069!10545-107H5;0.580067!10544-107H4;0.968075!10704-109H2;0.772598!10510-107D6;0.475972!10558-107I9;0.965837!10020-101D2;0.672955!10732-110B3;0.53292!10049-101G4;0.372097!10698-109G5;0.0731435!10437-106E5;0.814512!10417-106C3;0.983936!10035-101E8;0.745924!10171-103B9;0.663723!10157-103A4;0.555472!10034-101E7;0.72247!10072-101I9;0.69957!10199-103F1;0.460368!10200-103F2;0.551945!10697-109G4;0.639485!10723-110A3;0.791936!10179-103C8;0.639651!10160-103A7;0.887708!10180-103C9;0.924597!10162-103A9;0.284153!10021-101D3;0.401456!10840-111E3;0.117022!10706-109H4;0.353716!10033-101E6;0.218126!10032-101E5;0.701817!10490-107B4;0.726294!10439-106E7;0.755534!10022-101D4;0.577372!10176-103C5;0.48414!10469-106I1;0.454236!10067-101I4;0.4882!10411-106B6;0.944442!10471-106I3;0.771597!10030-101E3;0.288818!10475-106I7;0.391217!10787-110H4;0.880095!10477-106I9;0.834599!10695-109G2;0.886019!11771-123I7;0.3573!11772-123I8;0.402367!11773-123I9;0.543149!10093-102C3;0.291193!10442-106F1;0.819617!10442-106F1;0.986392!10201-103F3;0.910919!10639-108I9;0.308174!11843-124H7;0.692238!11841-124H5;0.656919!10693-109F9;0.989319!10436-106E4;0.375912!10483-107A6;0.6838!10282-104F3;0.975485!10023-101D5;0.829729!10066-101I3;0.785202!10065-101I2;0.595997!10800-110I8;0.647699!10610-108F7;0.287545!10841-111E4;0.501732!10541-107H1;0.731469!10842-111E5;0.751028!10562-108A4;0.551567!10024-101D6;0.0250869!10064-101I1;0.183981!10609-108F6;0.336868!10048-101G3;0.204529!10781-110G7;0.734983!10181-103D1;0.326886!10159-103A6;0.820907!10056-101H2;0.911147!10737-110B8;0.831249!10025-101D7;0.301507!10044-101F8;0.688656!10424-106D1;0.358492!10463-106H4;0.417267!10616-108G4;0.886848!10486-107A9;0.743678!10062-101H8;0.522074!10202-103F4;0.336352!10158-103A5;0.753962!10441-106E9;0.923004!10031-101E4;0.518768!10063-101H9;0.793684!10063-101H9;0.464116!11763-123H8;0.553491!11765-123I1;0.259126!11768-123I4;0.267148!10807-111A6;0.406698!10790-110H7;0.77585!10798-110I6;0.999568!10786-110H3;0.537112!10591-108D6;0.782157!10593-108D8;0.781126!10590-108D5;0.91083!10026-101D8;0.7177!10096-102C6;0.95154!10168-103B6;0.389073!10154-103A1;0.677503!10209-103G2;0.860878!10061-101H7;0.596798!10027-101D9;0.775381!10043-101F7;0.424746!10783-110G9;0.790075!10028-101E1;0.817409!10060-101H6;0.98494!10203-103F5;0.836817!10059-101H5;0.539003!10047-101G2;0.658746!10029-101E2;0.375313!10058-101H4;0.402206!10418-106C4;0.681324!10492-107B6;0.665518!10694-109G1;0.804475!10797-110I5;0.363492!10057-101H3;0.819006!10100-102D1;0.689843!10055-101H1;0.764499!10204-103F6;0.496926!10191-103E2;0.490032!10563-108A5;0.642002
|name=motif_TNGGAC
|name=motif_TNGGAC
|tomtom_result=NR3C1#MA0113.1;1;0.0154882;7.37239;1;6;TAGGAC;TCAGGACATAATGTTCCC;-!NRG1#MA0347.1;4;0.0157695;7.50627;1;6;TAGGAC;TGCGATGGACCCTGATCTAG;-
}}
}}

Latest revision as of 13:30, 7 September 2012

Full Name: motif_TNGGAC

Motif matrix
POACGT
010004096
021024102410241024
030040960
040040960
054096000
060409600

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NR3C1#MA0113.110.01548827.3723916TAGGACTCAGGACATAATGTTCCC-
NRG1#MA0347.140.01576957.5062716TAGGACTGCGATGGACCCTGATCTAG-
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