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MacroAPE 1083:Motif568: Difference between revisions

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828-111C9;0.336711!10788-110H5;0.214592!10792-110H9;0.198014!10765-110E9;0.235117!10829-111D1;0.450277!10830-111D2;0.390139!10831-111D3;0.361604!10832-111D4;0.524467!10833-111D5;0.396159!10764-110E8;0.313003!10770-110F5;0.172292!10399-106A3;0.230977!10400-106A4;0.310824!10405-106A9;0.360171!10834-111D6;0.313539!10835-111D7;0.344204!10836-111D8;0.26326!10837-111D9;0.19916!10699-109G6;0.223896!10802-111A1;0.318215!10796-110I4;0.315191!10010-101C1;0.736064!10810-111A9;0.558066!10421-106C7;0.502724!10708-109H6;0.347073!12235-129G3;0.839657!12236-129G4;0.912728!12237-129G5;0.435524!10167-103B5;0.710378!10151-102I7;0.512133!10428-106D5;0.401189!10795-110I3;0.580676!10805-111A4;0.439417!10052-101G7;0.562166!10189-103D9;0.502114!10589-108D4;0.817321!10425-106D2;0.59967!10427-106D4;0.982621!10702-109G9;0.135884!10432-106D9;0.815415!10496-107C1;0.926827!10718-109I7;0.856852!10011-101C2;0.436467!10053-101G8;0.602601!10686-109F2;0.541502!10084-102B3;0.308716!10012-101C3;0.263541!10085-102B4;0.354078!10482-107A5;0.628286!10419-106C5;0.7221!10080-102A8;0.846019!10760-110E4;0.49297!10709-109H7;0.915604!10710-109H8;0.754451!10703-109H1;0.796858!10719-109I8;0.486717!10642-109A3;0.470835!10177-103C6;0.599218!10164-103B2;0.441237!10173-103C2;0.40951!10166-103B4;0.546208!10083-102B2;0.420982!10188-103D8;0.416379!10552-107I3;0.374364!10553-107I4;0.779868!10013-101C4;0.29171!10536-107G5;0.322751!10618-108G6;0.69974!10423-106C9;0.542795!10785-110H2;0.366854!12238-129G6;0.60603!12239-129G7;0.767982!12240-129G8;0.433939!10416-106C2;0.930463!10801-110I9;0.142889!10766-110F1;0.342033!10824-111C5;0.26468!10825-111C6;0.284605!10826-111C7;0.288282!10454-106G4;0.268498!10409-106B4;0.266173!10638-108I8;0.238205!10636-108I6;0.932126!10513-107D9;0.432095!10420-106C6;0.697153!10082-102B1;0.547342!10014-101C5;0.362889!10070-101I7;0.411643!10452-106G2;0.436677!10453-106G3;0.183659!10449-106F8;0.204463!10042-101F6;0.200464!10069-101I6;0.347318!10193-103E4;0.571596!10631-108I1;0.396644!10438-106E6;0.296644!10488-107B2;0.953057!10196-103E7;0.785612!10071-101I8;0.511691!10071-101I8;0.415753!10041-101F5;0.641473!10451-106G1;0.306656!10450-106F9;0.834407!10604-108F1;0.580832!10605-108F2;0.701143!10606-108F3;0.912689!10603-108E9;0.523062!10497-107C2;0.60806!10448-106F7;0.515005!10643-109A4;0.852352!10426-106D3;0.708327!10431-106D8;0.484845!10197-103E8;0.39262!10443-106F2;0.57764!10815-111B5;0.61072!10816-111B6;0.727576!10817-111B7;0.842077!10015-101C6;0.818087!10410-106B5;0.402771!10054-101G9;0.874903!10758-110E2;0.309321!10711-109H9;0.430152!10040-101F4;0.910568!10470-106I2;0.37575!10415-106C1;0.812609!10198-103E9;0.991351!10614-108G2;0.384035!10612-108F9;0.692645!10549-107H9;0.853538!10615-108G3;0.758873!10487-107B1;0.702038!10433-106E1;0.48131!10688-109F4;0.921705!10444-106F3;0.468824!10444-106F3;0.0488503!10485-107A8;0.0703266!10413-106B8;0.560348!10175-103C4;0.686215!10161-103A8;0.436412!12131-128D7;0.410362!10624-108H3;0.444678!10712-109I1;0.352734!10205-103F7;0.121983!10206-103F8;0.406301!10207-103F9;0.580737!10050-101G5;0.462468!10051-101G6;0.8367!10016-101C7;0.735252!10046-101G1;0.708362!10778-110G4;0.719677!10633-108I3;0.521361!10818-111B8;0.912683!10819-111B9;0.895008!10820-111C1;0.979743!10484-107A7;0.92657!10808-111A7;0.652356!10169-103B7;0.407505!10153-102I9;0.468262!13425-144D5;0.395745!13433-144E4;0.413138!13437-144E8;0.352881!11904-125F5;0.273718!11905-125F6;0.187677!10039-101F3;0.173152!10791-110H8;0.388604!10017-101C8;0.632957!10045-101F9;0.644473!10509-107D5;0.414811!10839-111E2;0.922642!10692-109F8;0.786261!10079-102A7;0.69819!10078-102A6;0.587996!10721-110A1;0.867618!10569-108B2;0.730212!10570-108B3;0.512432!10571-108B4;0.892511!10647-109A8;0.382693!10752-110D5;0.600323!10782-110G8;0.523768!10726-110A6;0.986995!10018-101C9;0.242139!10086-102B5;0.695306!10182-103D2;0.958917!10165-103B3;0.381313!10499-107C4;0.410384!10408-106B3;0.385779!10019-101D1;0.249911!10068-101I5;0.733984!10075-102A3;0.545822!10077-102A5;0.513531!10727-110A7;0.657913!10775-110G1;0.377081!10412-106B7;0.260057!12231-129F8;0.0762762!12232-129F9;0.339362!12233-129G1;0.250409!12234-129G2;0.377377!10414-106B9;0.355218!10170-103B8;0.814936!10183-103D3;0.479116!10150-102I6;0.4171!10174-103C3;0.372994!10155-103A2;0.402185!10038-101F2;0.382524!10838-111E1;0.324727!10759-110E3;0.992913!10514-107E1;0.946133!10465-106H6;0.906316!10691-109F7;0.662286!10843-111E6;0.0566694!10844-111E7;0.239067!11747-123G1;0.707057!11748-123G2;0.0188859!11749-123G3;0.164892!11750-123G4;0.015585!11751-123G5;0.358132!11840-124H4;0.286175!11752-123G6;0.261186!11753-123G7;0.231767!11754-123G8;0.0732714!11755-123G9;0.0192708!11756-123H1;0.124267!11833-124G6;0.227782!11760-123H5;0.643077!11836-124G9;0.129574!11758-123H3;0.271097!11835-124G8;0.304247!11762-123H7;0.616807!11838-124H2;0.195956!11757-123H2;0.414672!11759-123H4;0.399182!11761-123H6;0.273345!11842-124H6;0.200225!11837-124H1;0.60029!10568-108B1;0.358396!13230-141I8;0.616604!13231-141I9;0.535395!10696-109G3;0.432922!10493-107B7;0.313716!10494-107B8;0.349608!10850-111F4;0.88791!10851-111F5;0.971606!10852-111F6;0.953458!10853-111F7;0.729542!10854-111F8;0.924565!10855-111F9;0.649524!10856-111G1;0.539378!10847-111F1;0.805288!10846-111E9;0.916694!10848-111F2;0.83254!10845-111E8;0.981824!10857-111G2;0.567144!10858-111G3;0.922251!10156-103A3;0.533394!11901-125F2;0.356106!11902-125F3;0.0470951!11903-125F4;0.0993981!10689-109F5;0.0848863!10648-109A9;0.92012!10784-110H1;0.590624!10744-110C6;0.888085!10772-110F7;0.122818!10474-106I6;0.386137!10600-108E6;0.258991!10684-109E9;0.389102!12226-129F3;0.0284017!12227-129F4;0.152648!10508-107D4;0.589331!10539-107G8;0.435491!10607-108F4;0.310044!10555-107I6;0.860431!10774-110F9;0.558938!10637-108I7;0.199608!10663-109C6;0.900029!10728-110A8;0.948111!10729-110A9;0.791179!10430-106D7;0.475441!10730-110B1;0.434217!10813-111B3;0.556146!10812-111B2;0.560614!10037-101F1;0.417754!10172-103C1;0.384062!10163-103B1;0.44745!10076-102A4;0.350843!10073-102A1;0.318231!10036-101E9;0.635123!10195-103E6;0.289584!10277-104E7;0.409137!10434-106E2;0.520623!10550-107I1;0.648261!10545-107H5;0.514087!10544-107H4;0.77637!10704-109H2;0.836615!10510-107D6;0.284882!10558-107I9;0.770704!10020-101D2;0.466323!10732-110B3;0.369134!10049-101G4;0.366209!10698-109G5;0.308516!10437-106E5;0.546558!10417-106C3;0.765624!10035-101E8;0.605025!10171-103B9;0.350158!10157-103A4;0.456495!10034-101E7;0.401878!10072-101I9;0.353334!10199-103F1;0.695392!10200-103F2;0.387178!10697-109G4;0.543599!10723-110A3;0.543162!10179-103C8;0.463221!10160-103A7;0.59269!10180-103C9;0.563577!10162-103A9;0.577034!10021-101D3;0.409081!10840-111E3;0.361227!10706-109H4;0.181909!10033-101E6;0.269987!10032-101E5;0.326099!10490-107B4;0.30907!10439-106E7;0.504372!10022-101D4;0.771711!10176-103C5;0.414217!10469-106I1;0.415538!10067-101I4;0.743127!10411-106B6;0.255428!10471-106I3;0.594911!10030-101E3;0.932455!10475-106I7;0.277846!10787-110H4;0.968011!10477-106I9;0.859289!10695-109G2;0.759032!11771-123I7;0.302593!11772-123I8;0.928118!11773-123I9;0.534442!10093-102C3;0.315809!10442-106F1;0.590615!10442-106F1;0.801455!10201-103F3;0.679685!10639-108I9;0.339966!11843-124H7;0.892654!11841-124H5;0.716957!10693-109F9;0.686446!10436-106E4;0.51537!10483-107A6;0.616152!10282-104F3;0.873181!10023-101D5;0.588487!10066-101I3;0.710548!10065-101I2;0.501771!10800-110I8;0.471598!10610-108F7;0.534272!10841-111E4;0.458661!10541-107H1;0.570716!10842-111E5;0.923892!10562-108A4;0.895613!10024-101D6;0.830429!10064-101I1;0.455068!10609-108F6;0.251371!10048-101G3;0.600125!10781-110G7;0.518992!10181-103D1;0.885115!10159-103A6;0.406064!10056-101H2;0.415931!10737-110B8;0.293112!10025-101D7;0.659024!10044-101F8;0.97103!10424-106D1;0.452692!10463-106H4;0.226331!10616-108G4;0.0438547!10486-107A9;0.337801!10062-101H8;0.493574!10202-103F4;0.368064!10158-103A5;0.553316!10441-106E9;0.387656!10031-101E4;0.542467!10063-101H9;0.33432!10063-101H9;0.583612!11763-123H8;0.458399!11765-123I1;0.229257!11768-123I4;0.247025!10807-111A6;0.313792!10790-110H7;0.55566!10798-110I6;0.807007!10786-110H3;0.608118!10591-108D6;0.778204!10593-108D8;0.90601!10590-108D5;0.370701!10026-101D8;0.548748!10096-102C6;0.961553!10168-103B6;0.370592!10154-103A1;0.487247!10209-103G2;0.397648!10061-101H7;0.529493!10027-101D9;0.53132!10043-101F7;0.1463!10783-110G9;0.120748!10028-101E1;0.390077!10060-101H6;0.813206!10203-103F5;0.442322!10059-101H5;0.554167!10047-101G2;0.406752!10029-101E2;0.677021!10058-101H4;0.462994!10418-106C4;0.554562!10492-107B6;0.976822!10694-109G1;0.563266!10797-110I5;0.380608!10057-101H3;0.281805!10100-102D1;0.637176!10055-101H1;0.378175!10204-103F6;0.337853!10191-103E2;0.486091!10563-108A5;0.789805
|name=motif568
|name=motif568
|tomtom_result=ZMS1#MA0441.1;1;0.00325132;1.54763;1;7;GCAGGGA;TGCGGGGAA;-!SP1#MA0079.1;3;0.00611623;2.91132;1;7;GCAGGGA;GGGGCGGGGT;+!EBF1#MA0154.1;3;0.00790599;3.76325;1;7;GCAGGGA;ACCCAAGGGA;+!SOK2#MA0385.1;4;0.00823187;3.91837;1;7;GCAGGGA;ACCTGCAGGCA;+!SUT1#MA0399.1;1;0.014385;6.84724;1;6;GCAGGGA;CGCGGGG;+!CHA4#MA0283.1;1;0.0147461;7.01915;1;7;GCAGGGA;GGCGGAGA;+!REI1#MA0364.1;0;0.0162662;7.74273;1;7;GCAGGGA;TCAGGGG;-!RGM1#MA0366.1;-2;0.0169235;8.05561;1;5;GCAGGGA;AGGGG;+!MIG2#MA0338.1;1;0.0169587;8.07236;1;6;GCAGGGA;TGCGGGG;-!UGA3#MA0410.1;1;0.0186245;8.86525;1;7;GCAGGGA;CGGCGGGA;+!MZF1_1-4#MA0056.1;-1;0.0188607;8.97771;1;6;GCAGGGA;TGGGGA;+!MIG1#MA0337.1;0;0.0191308;9.10625;1;7;GCAGGGA;GCGGGGG;-!MIG3#MA0339.1;1;0.0207074;9.8567;1;6;GCAGGGA;TGCGGGG;-
}}
}}

Latest revision as of 13:32, 7 September 2012

Full Name: motif568

Motif matrix
POACGT
01001374200
021359990274298443703
0310119355301052120176
04001374200
05869820091200616652
06663145031262860
07137420000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ZMS1#MA0441.110.003251321.5476317GCAGGGATGCGGGGAA-
SP1#MA0079.130.006116232.9113217GCAGGGAGGGGCGGGGT+
EBF1#MA0154.130.007905993.7632517GCAGGGAACCCAAGGGA+
SOK2#MA0385.140.008231873.9183717GCAGGGAACCTGCAGGCA+
SUT1#MA0399.110.0143856.8472416GCAGGGACGCGGGG+
CHA4#MA0283.110.01474617.0191517GCAGGGAGGCGGAGA+
REI1#MA0364.100.01626627.7427317GCAGGGATCAGGGG-
RGM1#MA0366.1-20.01692358.0556115GCAGGGAAGGGG+
MIG2#MA0338.110.01695878.0723616GCAGGGATGCGGGG-
UGA3#MA0410.110.01862458.8652517GCAGGGACGGCGGGA+
MZF1_1-4#MA0056.1-10.01886078.9777116GCAGGGATGGGGA+
MIG1#MA0337.100.01913089.1062517GCAGGGAGCGGGGG-
MIG3#MA0339.110.02070749.856716GCAGGGATGCGGGG-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif568&oldid=2134034"