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MacroAPE 1083:Motif CAGNGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;36576;0;0!02;36576;0;0;0!03;0;0;36576;0!04;9144;9144;9144;9144!05;0;0;36576;0!06;0;0;0;36576 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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11C9;0.716565!10788-110H5;0.351811!10792-110H9;0.483516!10765-110E9;0.486332!10829-111D1;0.685894!10830-111D2;0.839209!10831-111D3;0.783499!10832-111D4;0.490886!10833-111D5;0.945318!10764-110E8;0.936615!10770-110F5;0.29294!10399-106A3;0.398631!10400-106A4;0.686336!10405-106A9;0.613978!10834-111D6;0.580261!10835-111D7;0.655591!10836-111D8;0.750124!10837-111D9;0.748075!10699-109G6;0.804159!10802-111A1;0.828127!10796-110I4;0.684034!10010-101C1;0.561729!10810-111A9;0.197675!10421-106C7;0.582688!10708-109H6;0.361007!12235-129G3;0.397224!12236-129G4;0.817583!12237-129G5;0.669668!10167-103B5;0.80281!10151-102I7;0.932001!10428-106D5;0.874629!10795-110I3;0.168634!10805-111A4;0.915541!10052-101G7;0.135511!10189-103D9;0.586699!10589-108D4;0.329352!10425-106D2;0.252962!10427-106D4;0.904652!10702-109G9;0.739263!10432-106D9;0.201716!10496-107C1;0.439135!10718-109I7;0.338729!10011-101C2;0.787458!10053-101G8;0.262565!10686-109F2;0.794394!10084-102B3;0.49224!10012-101C3;0.889957!10085-102B4;0.774298!10482-107A5;0.932879!10419-106C5;0.361751!10080-102A8;0.223891!10760-110E4;0.525288!10709-109H7;0.633316!10710-109H8;0.408889!10703-109H1;0.440202!10719-109I8;0.119722!10642-109A3;0.743526!10177-103C6;0.101379!10164-103B2;0.714522!10173-103C2;0.844571!10166-103B4;0.814699!10083-102B2;0.918633!10188-103D8;0.963881!10552-107I3;0.801141!10553-107I4;0.540081!10013-101C4;0.0366419!10536-107G5;0.34702!10618-108G6;0.08187!10423-106C9;0.238776!10785-110H2;0.32977!12238-129G6;0.359866!12239-129G7;0.409987!12240-129G8;0.163423!10416-106C2;0.364704!10801-110I9;0.787959!10766-110F1;0.577541!10824-111C5;0.924855!10825-111C6;0.931475!10826-111C7;0.90896!10454-106G4;0.898757!10409-106B4;0.885232!10638-108I8;0.832621!10636-108I6;0.612091!10513-107D9;0.295496!10420-106C6;0.139838!10082-102B1;0.264641!10014-101C5;0.354217!10070-101I7;0.217834!10452-106G2;0.251935!10453-106G3;0.79055!10449-106F8;0.590252!10042-101F6;0.642323!10069-101I6;0.756763!10193-103E4;0.145362!10631-108I1;0.809416!10438-106E6;0.607311!10488-107B2;0.224287!10196-103E7;0.506123!10071-101I8;0.584396!10071-101I8;0.181088!10041-101F5;0.951706!10451-106G1;0.410983!10450-106F9;0.249983!10604-108F1;0.23143!10605-108F2;0.46714!10606-108F3;0.685727!10603-108E9;0.596477!10497-107C2;0.67456!10448-106F7;0.911983!10643-109A4;0.482324!10426-106D3;0.0489779!10431-106D8;0.531183!10197-103E8;0.202333!10443-106F2;0.332283!10815-111B5;0.76774!10816-111B6;0.567264!10817-111B7;0.512476!10015-101C6;0.595724!10410-106B5;0.542113!10054-101G9;0.307859!10758-110E2;0.361939!10711-109H9;0.170755!10040-101F4;0.699784!10470-106I2;0.889897!10415-106C1;0.0713806!10198-103E9;0.639684!10614-108G2;0.321584!10612-108F9;0.510452!10549-107H9;0.456174!10615-108G3;0.337995!10487-107B1;0.628377!10433-106E1;0.637937!10688-109F4;0.484421!10444-106F3;0.0905447!10444-106F3;0.70499!10485-107A8;0.673697!10413-106B8;0.582002!10175-103C4;0.993341!10161-103A8;0.839243!12131-128D7;0.931014!10624-108H3;0.345399!10712-109I1;0.86733!10205-103F7;0.921134!10206-103F8;0.168564!10207-103F9;0.218309!10050-101G5;0.433617!10051-101G6;0.611778!10016-101C7;0.297978!10046-101G1;0.296838!10778-110G4;0.199104!10633-108I3;0.625636!10818-111B8;0.533922!10819-111B9;0.808618!10820-111C1;0.794875!10484-107A7;0.790748!10808-111A7;0.608722!10169-103B7;0.955561!10153-102I9;0.75903!13425-144D5;0.819041!13433-144E4;0.333931!13437-144E8;0.304002!11904-125F5;0.387681!11905-125F6;0.800887!10039-101F3;0.870756!10791-110H8;0.866532!10017-101C8;0.118124!10045-101F9;0.547654!10509-107D5;0.489898!10839-111E2;0.95174!10692-109F8;0.463298!10079-102A7;0.151946!10078-102A6;0.262432!10721-110A1;0.369939!10569-108B2;0.459807!10570-108B3;0.674341!10571-108B4;0.938233!10647-109A8;0.809033!10752-110D5;0.83774!10782-110G8;0.596013!10726-110A6;0.98302!10018-101C9;0.383589!10086-102B5;0.225885!10182-103D2;0.305142!10165-103B3;0.919895!10499-107C4;0.943006!10408-106B3;0.170001!10019-101D1;0.399528!10068-101I5;0.751827!10075-102A3;0.441118!10077-102A5;0.818921!10727-110A7;0.688009!10775-110G1;0.729203!10412-106B7;0.644534!12231-129F8;0.399417!12232-129F9;0.482176!12233-129G1;0.415071!12234-129G2;0.453628!10414-106B9;0.379815!10170-103B8;0.274139!10183-103D3;0.720661!10150-102I6;0.812082!10174-103C3;0.780686!10155-103A2;0.809417!10038-101F2;0.828727!10838-111E1;0.765706!10759-110E3;0.273232!10514-107E1;0.45383!10465-106H6;0.972609!10691-109F7;0.840794!10843-111E6;0.534805!10844-111E7;0.109146!11747-123G1;0.239536!11748-123G2;0.580476!11749-123G3;0.704328!11750-123G4;0.862211!11751-123G5;0.854051!11840-124H4;0.7655!11752-123G6;0.705708!11753-123G7;0.584436!11754-123G8;0.741338!11755-123G9;0.233601!11756-123H1;0.833344!11833-124G6;0.958584!11760-123H5;0.586258!11836-124G9;0.920369!11758-123H3;0.873418!11835-124G8;0.49793!11762-123H7;0.287776!11838-124H2;0.54277!11757-123H2;0.670328!11759-123H4;0.729738!11761-123H6;0.580619!11842-124H6;0.849041!11837-124H1;0.592023!10568-108B1;0.283227!13230-141I8;0.684844!13231-141I9;0.301749!10696-109G3;0.311599!10493-107B7;0.916517!10494-107B8;0.327972!10850-111F4;0.182837!10851-111F5;0.363482!10852-111F6;0.948508!10853-111F7;0.295263!10854-111F8;0.757042!10855-111F9;0.650778!10856-111G1;0.624524!10847-111F1;0.179323!10846-111E9;0.34025!10848-111F2;0.382688!10845-111E8;0.162868!10857-111G2;0.190491!10858-111G3;0.778972!10156-103A3;0.325517!11901-125F2;0.788694!11902-125F3;0.723424!11903-125F4;0.795159!10689-109F5;0.943058!10648-109A9;0.813009!10784-110H1;0.971276!10744-110C6;0.587379!10772-110F7;0.744871!10474-106I6;0.547616!10600-108E6;0.362996!10684-109E9;0.71634!12226-129F3;0.580879!12227-129F4;0.256644!10508-107D4;0.832471!10539-107G8;0.43665!10607-108F4;0.628801!10555-107I6;0.232611!10774-110F9;0.340849!10637-108I7;0.677377!10663-109C6;0.72168!10728-110A8;0.285904!10729-110A9;0.420569!10430-106D7;0.9043!10730-110B1;0.686549!10813-111B3;0.315211!10812-111B2;0.210802!10037-101F1;0.518013!10172-103C1;0.829942!10163-103B1;0.731137!10076-102A4;0.815851!10073-102A1;0.844329!10036-101E9;0.89678!10195-103E6;0.857641!10277-104E7;0.816597!10434-106E2;0.919762!10550-107I1;0.210073!10545-107H5;0.258529!10544-107H4;0.499678!10704-109H2;0.082855!10510-107D6;0.100305!10558-107I9;0.947594!10020-101D2;0.684208!10732-110B3;0.219681!10049-101G4;0.561802!10698-109G5;0.429913!10437-106E5;0.345719!10417-106C3;0.155144!10035-101E8;0.919703!10171-103B9;0.900976!10157-103A4;0.875495!10034-101E7;0.852648!10072-101I9;0.867375!10199-103F1;0.82762!10200-103F2;0.570079!10697-109G4;0.304884!10723-110A3;0.639685!10179-103C8;0.205417!10160-103A7;0.85086!10180-103C9;0.803621!10162-103A9;0.754113!10021-101D3;0.888678!10840-111E3;0.175386!10706-109H4;0.602997!10033-101E6;0.322008!10032-101E5;0.865713!10490-107B4;0.844501!10439-106E7;0.17269!10022-101D4;0.318156!10176-103C5;0.33754!10469-106I1;0.933145!10067-101I4;0.818519!10411-106B6;0.259897!10471-106I3;0.0573885!10030-101E3;0.473636!10475-106I7;0.445847!10787-110H4;0.522655!10477-106I9;0.621839!10695-109G2;0.911312!11771-123I7;0.471524!11772-123I8;0.0073141!11773-123I9;0.00988122!10093-102C3;0.0484251!10442-106F1;0.527303!10442-106F1;0.909015!10201-103F3;0.881966!10639-108I9;0.409791!11843-124H7;0.190065!11841-124H5;0.600449!10693-109F9;0.549973!10436-106E4;0.107011!10483-107A6;0.810338!10282-104F3;0.489928!10023-101D5;0.314974!10066-101I3;0.283801!10065-101I2;0.147145!10800-110I8;0.15028!10610-108F7;0.382655!10841-111E4;0.845963!10541-107H1;0.263995!10842-111E5;0.280816!10562-108A4;0.324843!10024-101D6;0.465946!10064-101I1;0.197812!10609-108F6;0.242005!10048-101G3;0.351882!10781-110G7;0.320791!10181-103D1;0.387282!10159-103A6;0.792756!10056-101H2;0.776103!10737-110B8;0.606791!10025-101D7;0.399174!10044-101F8;0.82868!10424-106D1;0.607236!10463-106H4;0.920836!10616-108G4;0.1862!10486-107A9;0.315349!10062-101H8;0.459337!10202-103F4;0.327214!10158-103A5;0.433128!10441-106E9;0.733221!10031-101E4;0.666568!10063-101H9;0.87732!10063-101H9;0.871178!11763-123H8;0.236951!11765-123I1;0.151345!11768-123I4;0.301865!10807-111A6;0.218177!10790-110H7;0.649414!10798-110I6;0.826924!10786-110H3;0.63197!10591-108D6;0.892683!10593-108D8;0.648839!10590-108D5;0.841379!10026-101D8;0.517278!10096-102C6;0.0170018!10168-103B6;0.373749!10154-103A1;0.820879!10209-103G2;0.826251!10061-101H7;0.327383!10027-101D9;0.334366!10043-101F7;0.84956!10783-110G9;0.664477!10028-101E1;0.578553!10060-101H6;0.77753!10203-103F5;0.420097!10059-101H5;0.371608!10047-101G2;0.2449!10029-101E2;0.437415!10058-101H4;0.511756!10418-106C4;0.309793!10492-107B6;0.263575!10694-109G1;0.432991!10797-110I5;0.313923!10057-101H3;0.489336!10100-102D1;0.192955!10055-101H1;0.401427!10204-103F6;0.38459!10191-103E2;0.595183!10563-108A5;0.24564
|name=motif_CAGNGT
|name=motif_CAGNGT
|tomtom_result=ESR1#MA0112.2;4;0.00379381;1.80586;1;6;CAGAGT;AGGTCAGGGTGACCTGGGCC;-!ESR2#MA0258.1;6;0.0120472;5.73446;1;6;CAGAGT;CAAGGTCACGGTGACCTG;+!REB1#MA0363.1;0;0.0131687;6.26831;1;6;CAGAGT;CCGGGTAAC;-!NRG1#MA0347.1;6;0.0164397;7.82531;1;6;CAGAGT;CTAGATCAGGGTCCATCGCA;+
}}
}}

Latest revision as of 13:42, 7 September 2012

Full Name: motif_CAGNGT

Motif matrix
POACGT
0103657600
0236576000
0300365760
049144914491449144
0500365760
0600036576

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ESR1#MA0112.240.003793811.8058616CAGAGTAGGTCAGGGTGACCTGGGCC-
ESR2#MA0258.160.01204725.7344616CAGAGTCAAGGTCACGGTGACCTG+
REB1#MA0363.100.01316876.2683116CAGAGTCCGGGTAAC-
NRG1#MA0347.160.01643977.8253116CAGAGTCTAGATCAGGGTCCATCGCA+
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