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MacroAPE 1083:Motif9: Difference between revisions

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G5;0.045166!10534-107G3;0.00744937!10429-106D6;0.00226067!10464-106H5;0.00113854!10827-111C8;0.0108072!10789-110H6;0.17637!10828-111C9;0.260558!10788-110H5;0.279007!10792-110H9;0.0799485!10765-110E9;0.346299!10829-111D1;0.104772!10830-111D2;0.111815!10831-111D3;0.395884!10832-111D4;0.108643!10833-111D5;0.106655!10764-110E8;0.0894381!10770-110F5;0.249341!10399-106A3;0.168145!10400-106A4;0.227368!10405-106A9;0.162593!10834-111D6;0.23679!10835-111D7;0.184496!10836-111D8;0.0490693!10837-111D9;0.0399579!10699-109G6;0.233711!10802-111A1;0.783178!10796-110I4;0.246847!10010-101C1;0.105197!10810-111A9;0.0459423!10421-106C7;0.00230778!10708-109H6;0.142712!12235-129G3;0.296722!12236-129G4;0.420782!12237-129G5;0.572085!10167-103B5;0.346523!10151-102I7;0.0275444!10428-106D5;0.0671203!10795-110I3;0.578883!10805-111A4;0.0163068!10052-101G7;0.294073!10189-103D9;0.0162113!10589-108D4;0.0249961!10425-106D2;0.161366!10427-106D4;0.828179!10702-109G9;0.0941566!10432-106D9;0.136444!10496-107C1;0.0790222!10718-109I7;0.0577133!10011-101C2;0.17509!10053-101G8;0.00558696!10686-109F2;0.218992!10084-102B3;0.0263891!10012-101C3;0.146966!10085-102B4;0.0600468!10482-107A5;0.163035!10419-106C5;0.186667!10080-102A8;0.156101!10760-110E4;0.0352932!10709-109H7;0.00287274!10710-109H8;0.0403104!10703-109H1;0.0038369!10719-109I8;0.123638!10642-109A3;0.0600845!10177-103C6;0.328872!10164-103B2;0.0786708!10173-103C2;0.14!10166-103B4;0.245469!10083-102B2;0.126448!10188-103D8;0.186362!10552-107I3;0.011007!10553-107I4;0.0516043!10013-101C4;0.0997783!10536-107G5;0.00771391!10618-108G6;0.193673!10423-106C9;0.00389504!10785-110H2;0.0826401!12238-129G6;0.0197947!12239-129G7;0.701905!12240-129G8;0.161283!10416-106C2;0.812171!10801-110I9;0.0013782!10766-110F1;0.483916!10824-111C5;0.290021!10825-111C6;0.0219859!10826-111C7;0.0249814!10454-106G4;0.0202767!10409-106B4;0.0296501!10638-108I8;0.226508!10636-108I6;6.24541e-05!10513-107D9;0.00181322!10420-106C6;0.0390808!10082-102B1;0.0890171!10014-101C5;0.38549!10070-101I7;0.165106!10452-106G2;0.10709!10453-106G3;0.154666!10449-106F8;0.0843343!10042-101F6;0.056874!10069-101I6;0.366816!10193-103E4;0.0365062!10631-108I1;0.245831!10438-106E6;0.000187189!10488-107B2;0.0665425!10196-103E7;0.0431438!10071-101I8;0.342769!10071-101I8;0.033461!10041-101F5;0.147541!10451-106G1;0.060011!10450-106F9;0.0331374!10604-108F1;0.00438984!10605-108F2;0.108576!10606-108F3;0.0852476!10603-108E9;0.0778005!10497-107C2;0.0576786!10448-106F7;0.0692009!10643-109A4;0.0719966!10426-106D3;0.0427255!10431-106D8;0.0676181!10197-103E8;0.0568951!10443-106F2;0.268468!10815-111B5;0.180801!10816-111B6;0.000696089!10817-111B7;0.00128998!10015-101C6;0.000545186!10410-106B5;0.131286!10054-101G9;0.0224721!10758-110E2;0.102565!10711-109H9;0.589266!10040-101F4;0.350511!10470-106I2;0.0209169!10415-106C1;0.0144999!10198-103E9;0.106629!10614-108G2;0.00277964!10612-108F9;0.000151186!10549-107H9;0.050648!10615-108G3;0.00830701!10487-107B1;0.21163!10433-106E1;0.0835048!10688-109F4;0.179642!10444-106F3;0.167634!10444-106F3;0.0970918!10485-107A8;0.115374!10413-106B8;0.367844!10175-103C4;0.632423!10161-103A8;0.437952!12131-128D7;0.560423!10624-108H3;0.671437!10712-109I1;0.675796!10205-103F7;0.00956401!10206-103F8;0.00224043!10207-103F9;0.0078128!10050-101G5;0.00923105!10051-101G6;0.799798!10016-101C7;0.153069!10046-101G1;0.0491922!10778-110G4;0.0100307!10633-108I3;0.0321119!10818-111B8;0.0875293!10819-111B9;0.0801755!10820-111C1;0.0944257!10484-107A7;0.0884002!10808-111A7;0.0141308!10169-103B7;0.0278422!10153-102I9;0.0350851!13425-144D5;0.106938!13433-144E4;0.103706!13437-144E8;0.227426!11904-125F5;0.185564!11905-125F6;0.739368!10039-101F3;0.961853!10791-110H8;0.039031!10017-101C8;0.00826901!10045-101F9;0.269031!10509-107D5;0.161392!10839-111E2;0.288922!10692-109F8;0.0206449!10079-102A7;0.0430145!10078-102A6;0.0265985!10721-110A1;0.0870074!10569-108B2;0.0684294!10570-108B3;0.336705!10571-108B4;0.639075!10647-109A8;0.297438!10752-110D5;0.472888!10782-110G8;0.0454827!10726-110A6;0.0676447!10018-101C9;0.952278!10086-102B5;0.925071!10182-103D2;0.600914!10165-103B3;0.139659!10499-107C4;0.187305!10408-106B3;0.043366!10019-101D1;0.0994044!10068-101I5;0.0120707!10075-102A3;0.00124551!10077-102A5;0.0224095!10727-110A7;0.413934!10775-110G1;0.0606484!10412-106B7;0.00398915!12231-129F8;0.0365095!12232-129F9;0.79343!12233-129G1;0.232243!12234-129G2;0.381893!10414-106B9;0.661473!10170-103B8;0.0408282!10183-103D3;0.0194571!10150-102I6;0.0279837!10174-103C3;0.0660531!10155-103A2;0.101928!10038-101F2;0.0942154!10838-111E1;0.0957662!10759-110E3;0.298607!10514-107E1;0.0309146!10465-106H6;0.213849!10691-109F7;0.511232!10843-111E6;0.405073!10844-111E7;0.15693!11747-123G1;0.193234!11748-123G2;0.0443562!11749-123G3;0.0426828!11750-123G4;0.191877!11751-123G5;0.0592747!11840-124H4;0.0646466!11752-123G6;0.131629!11753-123G7;0.211248!11754-123G8;0.088582!11755-123G9;0.0042494!11756-123H1;0.105831!11833-124G6;0.0993981!11760-123H5;0.730972!11836-124G9;0.0921551!11758-123H3;0.0318238!11835-124G8;0.117045!11762-123H7;0.131625!11838-124H2;0.0331372!11757-123H2;0.226347!11759-123H4;0.143251!11761-123H6;0.0522362!11842-124H6;0.0937517!11837-124H1;0.37582!10568-108B1;0.181789!13230-141I8;0.907108!13231-141I9;0.0239468!10696-109G3;0.0244867!10493-107B7;0.665007!10494-107B8;0.287457!10850-111F4;0.00310455!10851-111F5;0.0216929!10852-111F6;0.466504!10853-111F7;0.754162!10854-111F8;0.0560509!10855-111F9;0.212286!10856-111G1;0.569993!10847-111F1;0.0537135!10846-111E9;0.833644!10848-111F2;0.176856!10845-111E8;0.0770412!10857-111G2;0.000309303!10858-111G3;0.000483532!10156-103A3;0.561653!11901-125F2;0.064906!11902-125F3;0.737987!11903-125F4;0.629891!10689-109F5;0.321503!10648-109A9;0.407432!10784-110H1;0.0315411!10744-110C6;0.00669154!10772-110F7;0.0734499!10474-106I6;0.153327!10600-108E6;0.11271!10684-109E9;0.783325!12226-129F3;0.948491!12227-129F4;0.030299!10508-107D4;0.688202!10539-107G8;0.343806!10607-108F4;0.895095!10555-107I6;0.0467734!10774-110F9;0.709732!10637-108I7;0.109381!10663-109C6;0.951201!10728-110A8;0.957336!10729-110A9;0.0913962!10430-106D7;0.0359742!10730-110B1;0.00979371!10813-111B3;0.60891!10812-111B2;0.0230033!10037-101F1;0.136259!10172-103C1;0.0483643!10163-103B1;0.0782461!10076-102A4;0.0965289!10073-102A1;0.0448789!10036-101E9;0.203119!10195-103E6;0.0557236!10277-104E7;0.0271568!10434-106E2;0.857404!10550-107I1;0.111017!10545-107H5;0.0194454!10544-107H4;0.0469477!10704-109H2;0.00742728!10510-107D6;0.487648!10558-107I9;0.55601!10020-101D2;0.914486!10732-110B3;0.000787212!10049-101G4;0.661636!10698-109G5;0.586097!10437-106E5;0.00242708!10417-106C3;0.174318!10035-101E8;0.188433!10171-103B9;0.0362689!10157-103A4;0.123694!10034-101E7;0.0352154!10072-101I9;0.0381095!10199-103F1;0.268411!10200-103F2;0.771717!10697-109G4;0.0733104!10723-110A3;0.514194!10179-103C8;0.00579548!10160-103A7;0.0924017!10180-103C9;0.198699!10162-103A9;0.402993!10021-101D3;0.197022!10840-111E3;0.552045!10706-109H4;0.0880677!10033-101E6;0.89237!10032-101E5;0.0920197!10490-107B4;0.049304!10439-106E7;0.0158639!10022-101D4;0.0456357!10176-103C5;0.0182706!10469-106I1;0.191168!10067-101I4;0.0232508!10411-106B6;0.0185977!10471-106I3;0.220316!10030-101E3;0.00646388!10475-106I7;0.0795497!10787-110H4;0.0523666!10477-106I9;0.243165!10695-109G2;0.10954!11771-123I7;0.0316869!11772-123I8;0.384477!11773-123I9;0.876566!10093-102C3;0.972552!10442-106F1;0.703714!10442-106F1;0.834067!10201-103F3;0.793471!10639-108I9;0.233458!11843-124H7;0.134894!11841-124H5;0.113776!10693-109F9;0.0861281!10436-106E4;0.0574582!10483-107A6;0.112995!10282-104F3;0.053527!10023-101D5;0.405966!10066-101I3;0.112861!10065-101I2;0.27021!10800-110I8;0.0461198!10610-108F7;0.0823543!10841-111E4;0.072419!10541-107H1;0.156127!10842-111E5;0.00896165!10562-108A4;0.133389!10024-101D6;0.0998868!10064-101I1;0.31803!10609-108F6;0.100573!10048-101G3;0.0811368!10781-110G7;0.00597006!10181-103D1;0.365411!10159-103A6;0.141793!10056-101H2;0.213794!10737-110B8;0.0493959!10025-101D7;0.0919357!10044-101F8;0.166698!10424-106D1;0.160873!10463-106H4;0.0892659!10616-108G4;0.0706898!10486-107A9;0.137258!10062-101H8;0.0827612!10202-103F4;0.0145295!10158-103A5;0.330957!10441-106E9;0.696369!10031-101E4;0.166744!10063-101H9;0.0502666!10063-101H9;0.17325!11763-123H8;0.0171729!11765-123I1;0.0210867!11768-123I4;0.111157!10807-111A6;0.0296758!10790-110H7;0.0251858!10798-110I6;0.0478994!10786-110H3;0.0497649!10591-108D6;0.0221602!10593-108D8;0.0466229!10590-108D5;0.0172537!10026-101D8;0.0258492!10096-102C6;0.237427!10168-103B6;0.584698!10154-103A1;0.247143!10209-103G2;0.427934!10061-101H7;0.27091!10027-101D9;0.106458!10043-101F7;0.886053!10783-110G9;0.262817!10028-101E1;0.472655!10060-101H6;0.357744!10203-103F5;0.0363889!10059-101H5;0.170339!10047-101G2;0.158525!10029-101E2;0.358512!10058-101H4;0.210546!10418-106C4;0.0531648!10492-107B6;0.00862599!10694-109G1;0.0811934!10797-110I5;0.104884!10057-101H3;0.000423258!10100-102D1;0.312236!10055-101H1;0.00300565!10204-103F6;0.0339!10191-103E2;0.0280773!10563-108A5;0.0497983
|name=motif9
|name=motif9
|tomtom_result=REST#MA0138.2;3;0.00703841;3.35029;1;8;CTCTCCAG;GCGCTGTCCATGGTGCTGA;+!REST#MA0138.2;4;0.00735565;3.50129;1;8;CTCTCCAG;GGCGCTGTCCATGGTGCTGAA;-!z#MA0255.1;3;0.00977929;4.65494;1;7;CTCTCCAG;AATCACTCAA;-!Trl#MA0205.1;3;0.014278;6.79634;1;7;CTCTCCAG;TTGCTCTCTC;+!TOS8#MA0408.1;0;0.0157126;7.47919;1;8;CTCTCCAG;CTGTCAAA;+!MZF1_1-4#MA0056.1;-1;0.0197944;9.42215;1;6;CTCTCCAG;TCCCCA;-!PDR8#MA0354.1;0;0.0198942;9.46964;1;8;CTCTCCAG;ATCTCCGT;-
}}
}}

Latest revision as of 13:53, 7 September 2012

Full Name: motif9

Motif matrix
POACGT
0103137900
0200031379
0303137900
0400031379
0503137900
068697216979850
0731379000
0866857627116225445

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
REST#MA0138.230.007038413.3502918CTCTCCAGGCGCTGTCCATGGTGCTGA+
REST#MA0138.240.007355653.5012918CTCTCCAGGGCGCTGTCCATGGTGCTGAA-
z#MA0255.130.009779294.6549417CTCTCCAGAATCACTCAA-
Trl#MA0205.130.0142786.7963417CTCTCCAGTTGCTCTCTC+
TOS8#MA0408.100.01571267.4791918CTCTCCAGCTGTCAAA+
MZF1_1-4#MA0056.1-10.01979449.4221516CTCTCCAGTCCCCA-
PDR8#MA0354.100.01989429.4696418CTCTCCAGATCTCCGT-
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