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MacroAPE 1083:Motif GCAATN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;304;0!02;0;304;0;0!03;304;0;0;0!04;304;0;0;0!05;0;0;0;304!06;76;76;76;76 |macroape_1083_sample_pvalues=11376-118A8;0.382862!11327-117E...")
 
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89-110H6;0.593163!10828-111C9;0.987616!10788-110H5;0.35362!10792-110H9;0.171726!10765-110E9;0.752621!10829-111D1;0.467523!10830-111D2;0.968389!10831-111D3;0.112402!10832-111D4;0.297331!10833-111D5;0.500003!10764-110E8;0.586892!10770-110F5;0.320884!10399-106A3;0.333824!10400-106A4;0.631794!10405-106A9;0.737956!10834-111D6;0.762451!10835-111D7;0.508472!10836-111D8;0.268443!10837-111D9;0.595584!10699-109G6;0.560266!10802-111A1;0.658923!10796-110I4;0.651052!10010-101C1;0.731261!10810-111A9;0.776366!10421-106C7;0.712509!10708-109H6;0.176047!12235-129G3;0.926747!12236-129G4;0.300919!12237-129G5;0.698393!10167-103B5;0.377746!10151-102I7;0.283218!10428-106D5;0.185756!10795-110I3;0.556753!10805-111A4;0.686512!10052-101G7;0.645419!10189-103D9;0.664431!10589-108D4;0.927547!10425-106D2;0.279326!10427-106D4;0.628503!10702-109G9;0.917758!10432-106D9;0.133917!10496-107C1;0.313548!10718-109I7;0.285076!10011-101C2;0.522142!10053-101G8;0.709717!10686-109F2;0.557313!10084-102B3;0.000461903!10012-101C3;0.0969236!10085-102B4;0.273628!10482-107A5;0.346158!10419-106C5;0.247389!10080-102A8;0.946596!10760-110E4;0.328853!10709-109H7;0.771237!10710-109H8;0.804028!10703-109H1;0.851227!10719-109I8;0.245224!10642-109A3;0.0413639!10177-103C6;0.00790205!10164-103B2;0.250415!10173-103C2;0.226836!10166-103B4;0.0513713!10083-102B2;0.0835771!10188-103D8;0.0759872!10552-107I3;0.481669!10553-107I4;0.356486!10013-101C4;0.910403!10536-107G5;0.85104!10618-108G6;0.420024!10423-106C9;0.476249!10785-110H2;0.899962!12238-129G6;0.734968!12239-129G7;0.843657!12240-129G8;0.939056!10416-106C2;0.720765!10801-110I9;0.725408!10766-110F1;0.588125!10824-111C5;0.51513!10825-111C6;0.693001!10826-111C7;0.770131!10454-106G4;0.592133!10409-106B4;0.273074!10638-108I8;0.535321!10636-108I6;0.772555!10513-107D9;0.837858!10420-106C6;0.55459!10082-102B1;0.358603!10014-101C5;0.250476!10070-101I7;0.502946!10452-106G2;0.407948!10453-106G3;0.548701!10449-106F8;0.738494!10042-101F6;0.7639!10069-101I6;0.159493!10193-103E4;0.359144!10631-108I1;0.19788!10438-106E6;0.780989!10488-107B2;0.923136!10196-103E7;0.406151!10071-101I8;0.947308!10071-101I8;0.49838!10041-101F5;0.300653!10451-106G1;0.897669!10450-106F9;0.270316!10604-108F1;0.255942!10605-108F2;0.646632!10606-108F3;0.446373!10603-108E9;0.496884!10497-107C2;0.437198!10448-106F7;0.306181!10643-109A4;0.248881!10426-106D3;0.868594!10431-106D8;0.586288!10197-103E8;0.767448!10443-106F2;0.977!10815-111B5;0.228137!10816-111B6;0.790305!10817-111B7;0.319047!10015-101C6;0.628257!10410-106B5;0.529765!10054-101G9;0.807372!10758-110E2;0.753991!10711-109H9;0.465312!10040-101F4;0.716289!10470-106I2;0.273167!10415-106C1;0.985329!10198-103E9;0.624337!10614-108G2;0.751044!10612-108F9;0.859938!10549-107H9;0.761765!10615-108G3;0.898904!10487-107B1;0.236987!10433-106E1;0.981644!10688-109F4;0.0739912!10444-106F3;0.579704!10444-106F3;0.631647!10485-107A8;0.699195!10413-106B8;0.55002!10175-103C4;0.717052!10161-103A8;0.139521!12131-128D7;0.0971472!10624-108H3;0.373468!10712-109I1;0.441859!10205-103F7;0.953856!10206-103F8;0.924173!10207-103F9;0.841895!10050-101G5;0.64286!10051-101G6;0.845957!10016-101C7;0.996153!10046-101G1;0.926315!10778-110G4;0.732888!10633-108I3;0.149!10818-111B8;0.540413!10819-111B9;0.807966!10820-111C1;0.824175!10484-107A7;0.857457!10808-111A7;0.339508!10169-103B7;0.929256!10153-102I9;0.187458!13425-144D5;0.205762!13433-144E4;0.710825!13437-144E8;0.591871!11904-125F5;0.524329!11905-125F6;0.93276!10039-101F3;0.878966!10791-110H8;0.263187!10017-101C8;0.758121!10045-101F9;0.673544!10509-107D5;0.920675!10839-111E2;0.345443!10692-109F8;0.369762!10079-102A7;0.757804!10078-102A6;0.90263!10721-110A1;0.767937!10569-108B2;0.702949!10570-108B3;0.791386!10571-108B4;0.407144!10647-109A8;0.81596!10752-110D5;0.645902!10782-110G8;0.647428!10726-110A6;0.918382!10018-101C9;0.638586!10086-102B5;0.926937!10182-103D2;0.84719!10165-103B3;0.176907!10499-107C4;0.107088!10408-106B3;0.848023!10019-101D1;0.476733!10068-101I5;0.232304!10075-102A3;0.71426!10077-102A5;0.315523!10727-110A7;0.9429!10775-110G1;0.585967!10412-106B7;0.940126!12231-129F8;0.913856!12232-129F9;0.315103!12233-129G1;0.647725!12234-129G2;0.51459!10414-106B9;0.230618!10170-103B8;0.886451!10183-103D3;0.204878!10150-102I6;0.191599!10174-103C3;0.153905!10155-103A2;0.31265!10038-101F2;0.157323!10838-111E1;0.187331!10759-110E3;0.222237!10514-107E1;0.549423!10465-106H6;0.446428!10691-109F7;0.227148!10843-111E6;0.585975!10844-111E7;0.0771856!11747-123G1;0.0315628!11748-123G2;0.453996!11749-123G3;0.56967!11750-123G4;0.394661!11751-123G5;0.271801!11840-124H4;0.19884!11752-123G6;0.586658!11753-123G7;0.757471!11754-123G8;0.187814!11755-123G9;0.238547!11756-123H1;0.044056!11833-124G6;0.0657538!11760-123H5;0.626383!11836-124G9;0.192311!11758-123H3;0.147138!11835-124G8;0.155236!11762-123H7;0.291356!11838-124H2;0.581964!11757-123H2;0.39077!11759-123H4;0.222673!11761-123H6;0.0945199!11842-124H6;0.46519!11837-124H1;0.0787033!10568-108B1;0.25454!13230-141I8;0.130984!13231-141I9;0.957574!10696-109G3;0.876593!10493-107B7;0.657533!10494-107B8;0.712967!10850-111F4;0.816418!10851-111F5;0.309461!10852-111F6;0.330642!10853-111F7;0.0319289!10854-111F8;0.428833!10855-111F9;0.808454!10856-111G1;0.764268!10847-111F1;0.725987!10846-111E9;0.638649!10848-111F2;0.869418!10845-111E8;0.191843!10857-111G2;0.110472!10858-111G3;0.968028!10156-103A3;0.372981!11901-125F2;0.193292!11902-125F3;0.919124!11903-125F4;0.946258!10689-109F5;0.826739!10648-109A9;0.923159!10784-110H1;0.121702!10744-110C6;0.944704!10772-110F7;0.660663!10474-106I6;0.09645!10600-108E6;0.949708!10684-109E9;0.67094!12226-129F3;0.032105!12227-129F4;0.70156!10508-107D4;0.421422!10539-107G8;0.0017352!10607-108F4;0.0069782!10555-107I6;0.0140013!10774-110F9;0.000136599!10637-108I7;0.0609621!10663-109C6;0.00587896!10728-110A8;0.00592224!10729-110A9;0.00896171!10430-106D7;0.11609!10730-110B1;0.51463!10813-111B3;0.148465!10812-111B2;0.198311!10037-101F1;0.892923!10172-103C1;0.297091!10163-103B1;0.222629!10076-102A4;0.160284!10073-102A1;0.19199!10036-101E9;0.170335!10195-103E6;0.264817!10277-104E7;0.221447!10434-106E2;0.145423!10550-107I1;0.730271!10545-107H5;0.772833!10544-107H4;0.574693!10704-109H2;0.400059!10510-107D6;0.399644!10558-107I9;0.383743!10020-101D2;0.337635!10732-110B3;0.454914!10049-101G4;0.968757!10698-109G5;0.383442!10437-106E5;0.915442!10417-106C3;0.0197081!10035-101E8;0.527141!10171-103B9;0.285551!10157-103A4;0.193259!10034-101E7;0.199218!10072-101I9;0.276439!10199-103F1;0.331358!10200-103F2;0.477832!10697-109G4;0.462376!10723-110A3;0.0474137!10179-103C8;0.682851!10160-103A7;0.163994!10180-103C9;0.158091!10162-103A9;0.834408!10021-101D3;0.31275!10840-111E3;0.11166!10706-109H4;0.834042!10033-101E6;0.0150247!10032-101E5;0.194699!10490-107B4;0.274584!10439-106E7;0.876181!10022-101D4;0.495634!10176-103C5;0.875357!10469-106I1;0.205331!10067-101I4;0.517398!10411-106B6;0.0767522!10471-106I3;0.588968!10030-101E3;0.844944!10475-106I7;0.465961!10787-110H4;0.359885!10477-106I9;0.255586!10695-109G2;0.153326!11771-123I7;0.77732!11772-123I8;0.882559!11773-123I9;0.643866!10093-102C3;0.792602!10442-106F1;0.426791!10442-106F1;0.514768!10201-103F3;0.467823!10639-108I9;0.973098!11843-124H7;0.382665!11841-124H5;0.589552!10693-109F9;0.248585!10436-106E4;0.838562!10483-107A6;0.44027!10282-104F3;0.669627!10023-101D5;0.533019!10066-101I3;0.49463!10065-101I2;0.308634!10800-110I8;0.953188!10610-108F7;0.287195!10841-111E4;0.0863971!10541-107H1;0.19733!10842-111E5;0.168983!10562-108A4;0.44578!10024-101D6;0.413563!10064-101I1;0.91891!10609-108F6;0.927304!10048-101G3;0.880002!10781-110G7;0.645302!10181-103D1;0.0305368!10159-103A6;0.122454!10056-101H2;0.155601!10737-110B8;0.268236!10025-101D7;0.0464017!10044-101F8;0.892633!10424-106D1;0.792646!10463-106H4;0.647064!10616-108G4;0.43969!10486-107A9;0.127309!10062-101H8;0.434149!10202-103F4;0.272495!10158-103A5;0.167124!10441-106E9;0.106934!10031-101E4;0.764562!10063-101H9;0.245806!10063-101H9;0.300426!11763-123H8;0.292691!11765-123I1;0.231306!11768-123I4;0.321958!10807-111A6;0.052722!10790-110H7;0.75263!10798-110I6;0.660879!10786-110H3;0.744212!10591-108D6;0.99132!10593-108D8;0.700809!10590-108D5;0.690817!10026-101D8;0.931937!10096-102C6;0.44522!10168-103B6;0.364049!10154-103A1;0.167747!10209-103G2;0.157223!10061-101H7;0.172229!10027-101D9;0.20179!10043-101F7;0.555412!10783-110G9;0.792449!10028-101E1;0.0222244!10060-101H6;0.356249!10203-103F5;0.185766!10059-101H5;0.217477!10047-101G2;0.188903!10029-101E2;0.164522!10058-101H4;0.178907!10418-106C4;0.179319!10492-107B6;0.922884!10694-109G1;0.809599!10797-110I5;0.865273!10057-101H3;0.786688!10100-102D1;0.763997!10055-101H1;0.45381!10204-103F6;0.64883!10191-103E2;0.355989!10563-108A5;0.277662
|name=motif_GCAATN
|name=motif_GCAATN
|tomtom_result=Ddit3::Cebpa#MA0019.1;4;0.000292592;0.139274;0.278477;6;GCAATA;AGATGCAATCCC;+!Cebpa#MA0102.1;4;0.000960244;0.457076;0.45696;6;GCAATA;TTTCGCAATCTT;+!slbo#MA0244.1;3;0.00288243;1.37204;0.875842;5;GCAATA;TTTGCAAT;-!HLF#MA0043.1;6;0.00368094;1.75213;0.875842;6;GCAATA;GGTTACGCAATT;+!CEBPA#MA0102.2;4;0.00466422;2.22017;0.887842;5;GCAATA;TTTCGCAAT;+!AFT1#MA0269.1;10;0.00649477;3.09151;0.999747;6;GCAATA;CCAATCGGGTGCAATATGTAA;-!ATHB-5#MA0110.1;0;0.00812059;3.8654;0.999747;6;GCAATA;CCAATTATT;+!Dll#MA0187.1;0;0.00943543;4.49126;0.999747;6;GCAATA;GTAATTA;-!Dr#MA0188.1;0;0.0147352;7.01396;0.999747;6;GCAATA;CCAATTA;+!Nobox#MA0125.1;1;0.0192166;9.14713;0.999747;6;GCAATA;ACCAATTA;-
}}
}}

Latest revision as of 13:58, 7 September 2012

Full Name: motif_GCAATN

Motif matrix
POACGT
01003040
02030400
03304000
04304000
05000304
0676767676

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Ddit3::Cebpa#MA0019.140.0002925920.1392740.2784776GCAATAAGATGCAATCCC+
Cebpa#MA0102.140.0009602440.4570760.456966GCAATATTTCGCAATCTT+
slbo#MA0244.130.002882431.372040.8758425GCAATATTTGCAAT-
HLF#MA0043.160.003680941.752130.8758426GCAATAGGTTACGCAATT+
CEBPA#MA0102.240.004664222.220170.8878425GCAATATTTCGCAAT+
AFT1#MA0269.1100.006494773.091510.9997476GCAATACCAATCGGGTGCAATATGTAA-
ATHB-5#MA0110.100.008120593.86540.9997476GCAATACCAATTATT+
Dll#MA0187.100.009435434.491260.9997476GCAATAGTAATTA-
Dr#MA0188.100.01473527.013960.9997476GCAATACCAATTA+
Nobox#MA0125.110.01921669.147130.9997476GCAATAACCAATTA-
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