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MacroAPE 1083:CNhs12524 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;73.56502436585093;96.49253156253131;14.22661069638086;4.715833375236955!2;89.81273354398482;34.62505691074183;47.75011708641384;16.812092458...")
 
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28-111C9;0.988054!10788-110H5;0.914969!10792-110H9;0.785736!10765-110E9;0.60534!10829-111D1;0.867644!10830-111D2;0.700338!10831-111D3;0.857114!10832-111D4;0.983054!10833-111D5;0.815844!10764-110E8;0.87834!10770-110F5;0.761435!10399-106A3;0.712634!10400-106A4;0.711264!10405-106A9;0.645028!10834-111D6;0.824945!10835-111D7;0.911668!10836-111D8;0.855781!10837-111D9;0.796504!10699-109G6;0.446118!10802-111A1;0.763071!10796-110I4;0.528622!10010-101C1;0.437256!10810-111A9;0.857698!10421-106C7;0.927095!10708-109H6;0.642526!12235-129G3;0.0916639!12236-129G4;0.16763!12237-129G5;0.019216!10167-103B5;0.0423915!10151-102I7;0.990261!10428-106D5;0.977227!10795-110I3;0.705428!10805-111A4;0.399401!10052-101G7;0.39437!10189-103D9;0.760915!10589-108D4;0.705311!10425-106D2;0.999796!10427-106D4;0.40885!10702-109G9;0.316296!10432-106D9;0.139489!10496-107C1;0.438841!10718-109I7;0.531216!10011-101C2;0.915579!10053-101G8;0.659411!10686-109F2;0.802415!10084-102B3;0.597936!10012-101C3;0.913123!10085-102B4;0.772848!10482-107A5;0.346403!10419-106C5;0.59916!10080-102A8;0.520461!10760-110E4;0.158438!10709-109H7;0.564701!10710-109H8;0.363239!10703-109H1;0.851634!10719-109I8;0.359042!10642-109A3;0.648164!10177-103C6;0.929757!10164-103B2;0.862381!10173-103C2;0.895939!10166-103B4;0.836871!10083-102B2;0.942901!10188-103D8;0.648425!10552-107I3;0.930915!10553-107I4;0.472268!10013-101C4;0.592938!10536-107G5;0.89025!10618-108G6;0.803702!10423-106C9;0.825143!10785-110H2;0.995852!12238-129G6;0.244608!12239-129G7;0.228768!12240-129G8;0.587166!10416-106C2;0.234509!10801-110I9;0.636826!10766-110F1;0.886882!10824-111C5;0.511512!10825-111C6;0.974145!10826-111C7;0.712566!10454-106G4;0.907302!10409-106B4;0.698889!10638-108I8;0.421991!10636-108I6;0.65756!10513-107D9;0.320362!10420-106C6;0.135174!10082-102B1;0.541613!10014-101C5;0.398525!10070-101I7;0.520939!10452-106G2;0.33364!10453-106G3;0.0453577!10449-106F8;0.0890647!10042-101F6;0.0875164!10069-101I6;0.668944!10193-103E4;0.441924!10631-108I1;0.992566!10438-106E6;0.440606!10488-107B2;0.552853!10196-103E7;0.30093!10071-101I8;0.791133!10071-101I8;0.555434!10041-101F5;0.722191!10451-106G1;0.625793!10450-106F9;0.405827!10604-108F1;0.498598!10605-108F2;0.0454398!10606-108F3;0.545184!10603-108E9;0.0694003!10497-107C2;0.322617!10448-106F7;0.221391!10643-109A4;0.449157!10426-106D3;0.257281!10431-106D8;0.983939!10197-103E8;0.720582!10443-106F2;0.967965!10815-111B5;0.908645!10816-111B6;0.572184!10817-111B7;0.331722!10015-101C6;0.559782!10410-106B5;0.60856!10054-101G9;0.0991845!10758-110E2;0.158014!10711-109H9;0.663306!10040-101F4;0.14384!10470-106I2;0.867195!10415-106C1;0.0745956!10198-103E9;0.931802!10614-108G2;0.921215!10612-108F9;0.803317!10549-107H9;0.19358!10615-108G3;0.55811!10487-107B1;0.0494042!10433-106E1;0.566261!10688-109F4;0.0715098!10444-106F3;0.369946!10444-106F3;0.730254!10485-107A8;0.800583!10413-106B8;0.313532!10175-103C4;0.193427!10161-103A8;0.71429!12131-128D7;0.51175!10624-108H3;0.688631!10712-109I1;0.393418!10205-103F7;0.886316!10206-103F8;0.687325!10207-103F9;0.751703!10050-101G5;0.583564!10051-101G6;0.60925!10016-101C7;0.42117!10046-101G1;0.841097!10778-110G4;0.972126!10633-108I3;0.931567!10818-111B8;0.276754!10819-111B9;0.52439!10820-111C1;0.628586!10484-107A7;0.514014!10808-111A7;0.161141!10169-103B7;0.818737!10153-102I9;0.800656!13425-144D5;0.969725!13433-144E4;0.460722!13437-144E8;0.706912!11904-125F5;0.821866!11905-125F6;0.756123!10039-101F3;0.800797!10791-110H8;0.870487!10017-101C8;0.899813!10045-101F9;0.459921!10509-107D5;0.264138!10839-111E2;0.0609399!10692-109F8;0.64545!10079-102A7;0.0467046!10078-102A6;0.615654!10721-110A1;0.634359!10569-108B2;0.606934!10570-108B3;0.668629!10571-108B4;0.394958!10647-109A8;0.563134!10752-110D5;0.0433455!10782-110G8;0.820699!10726-110A6;0.712441!10018-101C9;0.0482686!10086-102B5;0.922975!10182-103D2;0.949841!10165-103B3;0.536465!10499-107C4;0.750656!10408-106B3;0.26776!10019-101D1;0.574791!10068-101I5;0.792379!10075-102A3;0.995918!10077-102A5;0.869162!10727-110A7;0.785473!10775-110G1;0.350769!10412-106B7;0.733251!12231-129F8;0.828629!12232-129F9;0.33806!12233-129G1;0.353447!12234-129G2;0.487883!10414-106B9;0.290923!10170-103B8;0.775342!10183-103D3;0.920815!10150-102I6;0.722876!10174-103C3;0.922778!10155-103A2;0.651766!10038-101F2;0.764635!10838-111E1;0.715699!10759-110E3;0.636023!10514-107E1;0.948317!10465-106H6;0.349748!10691-109F7;0.460731!10843-111E6;0.227387!10844-111E7;0.777497!11747-123G1;0.8649!11748-123G2;0.540318!11749-123G3;0.6561!11750-123G4;0.81741!11751-123G5;0.808403!11840-124H4;0.950833!11752-123G6;0.317479!11753-123G7;0.395653!11754-123G8;0.9517!11755-123G9;0.972684!11756-123H1;0.584292!11833-124G6;0.517807!11760-123H5;0.719124!11836-124G9;0.483915!11758-123H3;0.821132!11835-124G8;0.548342!11762-123H7;0.869647!11838-124H2;0.382318!11757-123H2;0.349199!11759-123H4;0.874684!11761-123H6;0.520201!11842-124H6;0.929422!11837-124H1;0.824771!10568-108B1;0.886385!13230-141I8;0.031856!13231-141I9;0.212977!10696-109G3;0.261463!10493-107B7;0.537509!10494-107B8;0.321601!10850-111F4;0.324295!10851-111F5;0.41572!10852-111F6;0.906552!10853-111F7;0.89289!10854-111F8;0.855876!10855-111F9;0.386082!10856-111G1;0.448125!10847-111F1;0.475591!10846-111E9;0.787551!10848-111F2;0.690547!10845-111E8;0.737259!10857-111G2;0.571873!10858-111G3;0.739755!10156-103A3;0.648127!11901-125F2;0.841882!11902-125F3;0.99836!11903-125F4;0.780483!10689-109F5;0.608131!10648-109A9;0.227748!10784-110H1;0.222512!10744-110C6;0.204442!10772-110F7;0.98166!10474-106I6;0.436235!10600-108E6;0.93833!10684-109E9;0.282236!12226-129F3;0.156579!12227-129F4;0.340466!10508-107D4;0.00643423!10539-107G8;0.210105!10607-108F4;0.849759!10555-107I6;0.473226!10774-110F9;0.34543!10637-108I7;0.811316!10663-109C6;0.825199!10728-110A8;0.984934!10729-110A9;0.936655!10430-106D7;0.92701!10730-110B1;0.17533!10813-111B3;0.956762!10812-111B2;0.919708!10037-101F1;0.3907!10172-103C1;0.914984!10163-103B1;0.755521!10076-102A4;0.796645!10073-102A1;0.815185!10036-101E9;0.72498!10195-103E6;0.949012!10277-104E7;0.960875!10434-106E2;0.354442!10550-107I1;0.713377!10545-107H5;0.724825!10544-107H4;0.950399!10704-109H2;0.589991!10510-107D6;0.446741!10558-107I9;0.0164459!10020-101D2;0.71741!10732-110B3;0.351162!10049-101G4;0.607125!10698-109G5;0.0579605!10437-106E5;0.75012!10417-106C3;0.813936!10035-101E8;0.0152637!10171-103B9;0.922266!10157-103A4;0.820518!10034-101E7;0.959188!10072-101I9;0.923887!10199-103F1;0.945208!10200-103F2;0.711718!10697-109G4;0.506969!10723-110A3;0.78071!10179-103C8;0.565173!10160-103A7;0.663019!10180-103C9;0.735752!10162-103A9;0.506426!10021-101D3;0.654165!10840-111E3;0.829027!10706-109H4;0.304116!10033-101E6;0.670677!10032-101E5;0.881632!10490-107B4;0.788842!10439-106E7;0.680263!10022-101D4;0.233249!10176-103C5;0.843211!10469-106I1;0.924395!10067-101I4;0.112913!10411-106B6;0.860548!10471-106I3;0.787198!10030-101E3;0.12322!10475-106I7;0.864727!10787-110H4;0.772662!10477-106I9;0.350378!10695-109G2;0.870688!11771-123I7;0.400889!11772-123I8;0.11138!11773-123I9;0.346774!10093-102C3;0.925227!10442-106F1;0.949566!10442-106F1;0.16504!10201-103F3;0.142964!10639-108I9;0.962607!11843-124H7;0.723995!11841-124H5;0.621032!10693-109F9;0.543767!10436-106E4;0.609004!10483-107A6;0.360791!10282-104F3;0.492828!10023-101D5;0.405952!10066-101I3;0.36287!10065-101I2;0.557766!10800-110I8;0.276416!10610-108F7;0.066856!10841-111E4;0.724062!10541-107H1;0.881832!10842-111E5;0.474286!10562-108A4;0.537321!10024-101D6;0.17533!10064-101I1;0.404164!10609-108F6;0.749107!10048-101G3;0.0896338!10781-110G7;0.715232!10181-103D1;0.747489!10159-103A6;0.63652!10056-101H2;0.42485!10737-110B8;0.929684!10025-101D7;0.83699!10044-101F8;0.626824!10424-106D1;0.73659!10463-106H4;0.291744!10616-108G4;0.771203!10486-107A9;0.988327!10062-101H8;0.909493!10202-103F4;0.530858!10158-103A5;0.392472!10441-106E9;0.445663!10031-101E4;0.0490532!10063-101H9;0.817383!10063-101H9;0.696757!11763-123H8;0.285355!11765-123I1;0.163515!11768-123I4;0.21165!10807-111A6;0.0776169!10790-110H7;0.163121!10798-110I6;0.658182!10786-110H3;0.070888!10591-108D6;0.508445!10593-108D8;0.464912!10590-108D5;0.560542!10026-101D8;0.327201!10096-102C6;0.810238!10168-103B6;0.58062!10154-103A1;0.588369!10209-103G2;0.704638!10061-101H7;0.230604!10027-101D9;0.671214!10043-101F7;0.913944!10783-110G9;0.981846!10028-101E1;0.628255!10060-101H6;0.493479!10203-103F5;0.61007!10059-101H5;0.285049!10047-101G2;0.298288!10029-101E2;0.864968!10058-101H4;0.736074!10418-106C4;0.449985!10492-107B6;0.248014!10694-109G1;0.394656!10797-110I5;0.235394!10057-101H3;0.522502!10100-102D1;0.109568!10055-101H1;0.560553!10204-103F6;0.560463!10191-103E2;0.311592!10563-108A5;0.562956
|name=CNhs12524_bu_f2
|name=CNhs12524_bu_f2
|tomtom_result=SFL1#MA0377.1;3;0.00257699;1.22665;1;12;CAAAGAGATGAT;TAGAGAATAGAAGAAATAAAA;+!TAL1::TCF3#MA0091.1;-2;0.00809594;3.85367;1;10;CAAAGAGATGAT;AACAGATGGTCG;-!ECM23#MA0293.1;-3;0.0082964;3.94908;1;9;CAAAGAGATGAT;AAAGATCTAAA;+!Trl#MA0205.1;-2;0.0089783;4.27367;1;10;CAAAGAGATGAT;GAGAGAGCAA;-!Tal1::Gata1#MA0140.1;6;0.00925945;4.4075;1;12;CAAAGAGATGAT;CTGGTGGGGACAGATAAG;+!Gata1#MA0035.2;-1;0.00931556;4.43421;1;11;CAAAGAGATGAT;ACAGATAAGAA;+!HAP5#MA0316.1;2;0.0120193;5.72119;1;12;CAAAGAGATGAT;ACCAATCAGATCCCA;-!HMG-I/Y#MA0045.1;-1;0.0120416;5.73179;1;11;CAAAGAGATGAT;CAACAAATGGAAAAAC;+!br_Z2#MA0011.1;-1;0.0122532;5.83255;1;8;CAAAGAGATGAT;AAATAGTA;-!HAP4#MA0315.1;2;0.0127141;6.05193;1;12;CAAAGAGATGAT;ACCAATCAGAGGCGA;+!ABF1#MA0265.1;5;0.0127409;6.06468;1;11;CAAAGAGATGAT;TCGTATAAAGTGATAA;+!TOD6#MA0350.1;6;0.0157096;7.47776;1;12;CAAAGAGATGAT;AAAACGCGATGAGCTGTGCCT;-!HAP3#MA0314.1;7;0.0196874;9.3712;1;8;CAAAGAGATGAT;TCTGAACCAATCAGA;-!RXR::RAR_DR5#MA0159.1;6;0.0207082;9.85712;1;11;CAAAGAGATGAT;AGGTCATGGAGAGGTCA;+
}}
}}

Latest revision as of 14:00, 7 September 2012

Full Name: CNhs12524_bu_f2

Motif matrix
POACGT
173.5650243658509396.4925315625313114.226610696380864.715833375236955
289.8127335439848234.6250569107418347.7501170864138416.812092458859517
3128.832722666799347.011292927523339.0820312535278164.073953152149601
4104.8703972724065530.43871429017371411.18665005748771642.50423837993208
51.482087488338066469.94343114094785114.05214502682753.5223363438867197
6184.93495297909381.16607730804503331.16361680059688941.735352912264314
71.4043031839184051.533638435159522185.61333097071020.44872741021199997
8151.089291996076382.89393502812225234.0263563177844760.9904166580169723
968.612526679319159.7440160644316671.8985521491447939108.74490510710443
1017.40076298584430260.4105989859050467.513273106656143.67536492159458
1176.767145261023614.27934017703509747.9435176452614250.00999691667992
1267.4688736056791814.37782072134933737.79555888519321669.35774678777828

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SFL1#MA0377.130.002576991.22665112CAAAGAGATGATTAGAGAATAGAAGAAATAAAA+
TAL1::TCF3#MA0091.1-20.008095943.85367110CAAAGAGATGATAACAGATGGTCG-
ECM23#MA0293.1-30.00829643.9490819CAAAGAGATGATAAAGATCTAAA+
Trl#MA0205.1-20.00897834.27367110CAAAGAGATGATGAGAGAGCAA-
Tal1::Gata1#MA0140.160.009259454.4075112CAAAGAGATGATCTGGTGGGGACAGATAAG+
Gata1#MA0035.2-10.009315564.43421111CAAAGAGATGATACAGATAAGAA+
HAP5#MA0316.120.01201935.72119112CAAAGAGATGATACCAATCAGATCCCA-
HMG-I/Y#MA0045.1-10.01204165.73179111CAAAGAGATGATCAACAAATGGAAAAAC+
br_Z2#MA0011.1-10.01225325.8325518CAAAGAGATGATAAATAGTA-
HAP4#MA0315.120.01271416.05193112CAAAGAGATGATACCAATCAGAGGCGA+
ABF1#MA0265.150.01274096.06468111CAAAGAGATGATTCGTATAAAGTGATAA+
TOD6#MA0350.160.01570967.47776112CAAAGAGATGATAAAACGCGATGAGCTGTGCCT-
HAP3#MA0314.170.01968749.371218CAAAGAGATGATTCTGAACCAATCAGA-
RXR::RAR_DR5#MA0159.160.02070829.85712111CAAAGAGATGATAGGTCATGGAGAGGTCA+
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