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MacroAPE 1083:TCATCCACATC,motif938: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;19.855;28.88;18.772;293.493!2;22.743;302.157;28.519;7.581!3;264.613;28.158;34.656;33.573!4;20.216;21.66;20.216;298.908!5;11.552;316.958;19.4...")
 
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29-106D6;0.359955!10464-106H5;0.168008!10827-111C8;0.770943!10789-110H6;0.487837!10828-111C9;0.349382!10788-110H5;0.107552!10792-110H9;0.694698!10765-110E9;0.850187!10829-111D1;0.454199!10830-111D2;0.639038!10831-111D3;0.369109!10832-111D4;0.806536!10833-111D5;0.759183!10764-110E8;0.898095!10770-110F5;0.495747!10399-106A3;0.46625!10400-106A4;0.795218!10405-106A9;0.751862!10834-111D6;0.743265!10835-111D7;0.611439!10836-111D8;0.256505!10837-111D9;0.659254!10699-109G6;0.565631!10802-111A1;0.330487!10796-110I4;0.8647!10010-101C1;0.462833!10810-111A9;0.0730665!10421-106C7;0.675262!10708-109H6;0.501911!12235-129G3;0.893101!12236-129G4;0.228145!12237-129G5;0.144286!10167-103B5;0.717868!10151-102I7;0.797052!10428-106D5;0.895882!10795-110I3;0.266523!10805-111A4;0.596516!10052-101G7;0.871815!10189-103D9;0.455657!10589-108D4;0.000429197!10425-106D2;0.7666!10427-106D4;0.139068!10702-109G9;0.578533!10432-106D9;0.142703!10496-107C1;0.765982!10718-109I7;0.811728!10011-101C2;0.751287!10053-101G8;0.421991!10686-109F2;0.278904!10084-102B3;0.0370083!10012-101C3;0.740001!10085-102B4;0.978224!10482-107A5;0.918889!10419-106C5;0.971731!10080-102A8;0.793813!10760-110E4;0.0183765!10709-109H7;0.325535!10710-109H8;0.641887!10703-109H1;0.00478295!10719-109I8;0.838727!10642-109A3;0.7116!10177-103C6;0.859156!10164-103B2;0.447225!10173-103C2;0.968888!10166-103B4;0.685332!10083-102B2;0.796988!10188-103D8;0.990452!10552-107I3;0.941156!10553-107I4;0.168153!10013-101C4;0.0666767!10536-107G5;0.392836!10618-108G6;0.640006!10423-106C9;0.100834!10785-110H2;0.286706!12238-129G6;0.015505!12239-129G7;0.0403889!12240-129G8;0.706269!10416-106C2;0.151565!10801-110I9;0.670978!10766-110F1;0.0748967!10824-111C5;0.590401!10825-111C6;0.547707!10826-111C7;0.587979!10454-106G4;0.252396!10409-106B4;0.835961!10638-108I8;0.708635!10636-108I6;0.607008!10513-107D9;0.415058!10420-106C6;0.0871986!10082-102B1;0.509088!10014-101C5;0.00122047!10070-101I7;0.0208493!10452-106G2;0.0139185!10453-106G3;0.422277!10449-106F8;0.151095!10042-101F6;0.347748!10069-101I6;0.353721!10193-103E4;0.121496!10631-108I1;0.941777!10438-106E6;0.931351!10488-107B2;0.0338996!10196-103E7;0.997706!10071-101I8;0.205832!10071-101I8;0.147718!10041-101F5;0.426237!10451-106G1;0.259959!10450-106F9;0.388523!10604-108F1;0.695821!10605-108F2;0.568002!10606-108F3;0.565469!10603-108E9;0.46619!10497-107C2;0.260149!10448-106F7;0.214587!10643-109A4;0.484668!10426-106D3;0.276109!10431-106D8;0.0322229!10197-103E8;0.213936!10443-106F2;0.0429475!10815-111B5;0.745779!10816-111B6;0.154276!10817-111B7;0.181027!10015-101C6;0.161388!10410-106B5;0.0124874!10054-101G9;0.203312!10758-110E2;0.114195!10711-109H9;0.0039145!10040-101F4;0.145598!10470-106I2;0.991675!10415-106C1;0.116362!10198-103E9;0.730885!10614-108G2;0.156326!10612-108F9;0.856711!10549-107H9;0.418207!10615-108G3;0.480528!10487-107B1;0.430567!10433-106E1;0.468542!10688-109F4;0.954728!10444-106F3;0.0411095!10444-106F3;0.234073!10485-107A8;0.160473!10413-106B8;0.0713827!10175-103C4;0.0412557!10161-103A8;0.342691!12131-128D7;0.455288!10624-108H3;0.152228!10712-109I1;0.578099!10205-103F7;0.738324!10206-103F8;0.355005!10207-103F9;0.789807!10050-101G5;0.138769!10051-101G6;0.150587!10016-101C7;0.510662!10046-101G1;0.102329!10778-110G4;0.192653!10633-108I3;0.539334!10818-111B8;0.5331!10819-111B9;0.37416!10820-111C1;0.490839!10484-107A7;0.41041!10808-111A7;0.665284!10169-103B7;0.969716!10153-102I9;0.946487!13425-144D5;0.775156!13433-144E4;0.287683!13437-144E8;0.496291!11904-125F5;0.424623!11905-125F6;0.826378!10039-101F3;0.0736194!10791-110H8;0.999296!10017-101C8;0.0457691!10045-101F9;0.000294543!10509-107D5;0.00488591!10839-111E2;0.407261!10692-109F8;0.987297!10079-102A7;0.0514398!10078-102A6;0.255425!10721-110A1;0.289875!10569-108B2;0.860781!10570-108B3;0.114802!10571-108B4;0.176269!10647-109A8;0.00383626!10752-110D5;0.995658!10782-110G8;0.99609!10726-110A6;0.00805811!10018-101C9;0.939412!10086-102B5;0.0757999!10182-103D2;0.010723!10165-103B3;0.55807!10499-107C4;0.513867!10408-106B3;0.336945!10019-101D1;0.0242395!10068-101I5;0.0371908!10075-102A3;0.156746!10077-102A5;0.0769301!10727-110A7;0.279866!10775-110G1;0.897984!10412-106B7;0.791267!12231-129F8;0.37853!12232-129F9;0.0673648!12233-129G1;0.018189!12234-129G2;0.0428524!10414-106B9;0.178515!10170-103B8;0.7371!10183-103D3;0.844941!10150-102I6;0.898346!10174-103C3;0.935236!10155-103A2;0.0774634!10038-101F2;0.173644!10838-111E1;0.232957!10759-110E3;0.680184!10514-107E1;0.3831!10465-106H6;0.89151!10691-109F7;0.50821!10843-111E6;0.0138298!10844-111E7;0.250983!11747-123G1;0.328801!11748-123G2;0.0122038!11749-123G3;0.227663!11750-123G4;0.108709!11751-123G5;0.140405!11840-124H4;0.121613!11752-123G6;0.148114!11753-123G7;0.0393046!11754-123G8;0.199979!11755-123G9;0.167646!11756-123H1;0.0485851!11833-124G6;0.217007!11760-123H5;0.00352755!11836-124G9;0.181605!11758-123H3;0.0271276!11835-124G8;0.0047182!11762-123H7;0.128678!11838-124H2;0.644517!11757-123H2;0.389924!11759-123H4;0.54979!11761-123H6;0.0815649!11842-124H6;0.12639!11837-124H1;0.0461846!10568-108B1;0.0685131!13230-141I8;0.671642!13231-141I9;0.0584669!10696-109G3;0.0424889!10493-107B7;0.746341!10494-107B8;0.934171!10850-111F4;0.0398668!10851-111F5;0.116495!10852-111F6;0.334109!10853-111F7;0.791313!10854-111F8;0.526603!10855-111F9;0.880986!10856-111G1;0.242256!10847-111F1;0.236142!10846-111E9;0.0754827!10848-111F2;0.208268!10845-111E8;0.510627!10857-111G2;0.89684!10858-111G3;0.0219151!10156-103A3;0.880747!11901-125F2;0.977529!11902-125F3;0.595927!11903-125F4;0.494105!10689-109F5;0.759362!10648-109A9;0.645505!10784-110H1;0.532097!10744-110C6;0.842294!10772-110F7;0.325036!10474-106I6;0.886182!10600-108E6;0.809739!10684-109E9;0.454183!12226-129F3;0.30698!12227-129F4;0.0851922!10508-107D4;0.474098!10539-107G8;0.37995!10607-108F4;0.894999!10555-107I6;0.883808!10774-110F9;0.315135!10637-108I7;0.693969!10663-109C6;0.875906!10728-110A8;0.786844!10729-110A9;0.323515!10430-106D7;0.32785!10730-110B1;0.59029!10813-111B3;0.903866!10812-111B2;0.638946!10037-101F1;0.241061!10172-103C1;0.963765!10163-103B1;0.940775!10076-102A4;0.883996!10073-102A1;0.735769!10036-101E9;0.66153!10195-103E6;0.901225!10277-104E7;0.995312!10434-106E2;0.4574!10550-107I1;0.28349!10545-107H5;0.280797!10544-107H4;0.691101!10704-109H2;0.37895!10510-107D6;0.146313!10558-107I9;0.0142274!10020-101D2;0.936103!10732-110B3;0.355865!10049-101G4;0.381237!10698-109G5;0.0788843!10437-106E5;0.159904!10417-106C3;0.84672!10035-101E8;0.49417!10171-103B9;0.972367!10157-103A4;0.925175!10034-101E7;0.987637!10072-101I9;0.986938!10199-103F1;0.647124!10200-103F2;0.00276236!10697-109G4;0.470365!10723-110A3;0.864352!10179-103C8;4.98617e-05!10160-103A7;0.949054!10180-103C9;0.746009!10162-103A9;0.86785!10021-101D3;0.897911!10840-111E3;0.0494324!10706-109H4;0.507831!10033-101E6;0.809246!10032-101E5;0.76848!10490-107B4;0.890661!10439-106E7;0.25115!10022-101D4;0.507109!10176-103C5;0.17389!10469-106I1;0.844143!10067-101I4;0.158963!10411-106B6;0.106615!10471-106I3;0.28347!10030-101E3;0.173839!10475-106I7;0.0517238!10787-110H4;0.712175!10477-106I9;0.125579!10695-109G2;0.158847!11771-123I7;0.341106!11772-123I8;0.831089!11773-123I9;0.697143!10093-102C3;0.152036!10442-106F1;0.00416608!10442-106F1;0.427653!10201-103F3;0.408804!10639-108I9;0.321541!11843-124H7;0.227196!11841-124H5;0.512225!10693-109F9;0.208994!10436-106E4;0.0582869!10483-107A6;0.236236!10282-104F3;0.792091!10023-101D5;0.309163!10066-101I3;0.0255479!10065-101I2;0.0914892!10800-110I8;0.224412!10610-108F7;0.441635!10841-111E4;0.986389!10541-107H1;0.659908!10842-111E5;0.382581!10562-108A4;0.568645!10024-101D6;0.193172!10064-101I1;0.0270264!10609-108F6;0.0345098!10048-101G3;0.388794!10781-110G7;0.826325!10181-103D1;0.0993815!10159-103A6;0.166441!10056-101H2;0.300981!10737-110B8;0.463945!10025-101D7;0.0470914!10044-101F8;0.0241992!10424-106D1;0.00510696!10463-106H4;0.659593!10616-108G4;0.722765!10486-107A9;0.519142!10062-101H8;0.327505!10202-103F4;0.0371022!10158-103A5;0.00108971!10441-106E9;0.196508!10031-101E4;0.138436!10063-101H9;0.858424!10063-101H9;0.559195!11763-123H8;0.203763!11765-123I1;0.0214935!11768-123I4;0.354516!10807-111A6;0.0467276!10790-110H7;0.873568!10798-110I6;0.322475!10786-110H3;0.90644!10591-108D6;0.222408!10593-108D8;0.575048!10590-108D5;0.578282!10026-101D8;0.366836!10096-102C6;0.0536039!10168-103B6;0.207204!10154-103A1;0.685049!10209-103G2;0.646482!10061-101H7;0.028305!10027-101D9;0.0738222!10043-101F7;0.847224!10783-110G9;0.14999!10028-101E1;0.729721!10060-101H6;0.106067!10203-103F5;0.160556!10059-101H5;0.0403045!10047-101G2;0.0379327!10029-101E2;5.96511e-05!10058-101H4;0.00611564!10418-106C4;0.123335!10492-107B6;0.198721!10694-109G1;0.995737!10797-110I5;0.438401!10057-101H3;0.448336!10100-102D1;0.290683!10055-101H1;0.342599!10204-103F6;0.388771!10191-103E2;0.267575!10563-108A5;0.0514341
|name=TCATCCACATC,motif938,CNhs11979,T:361.0(10.88%),B:4366.5(5.92%),P:1e-27
|name=TCATCCACATC,motif938,CNhs11979,T:361.0(10.88%),B:4366.5(5.92%),P:1e-27
|tomtom_result=ZNF354C#MA0130.1;-2;0.000837635;0.398714;0.797428;6;TCATCCACATC;ATCCAC;+!MET32#MA0334.1;-2;0.0141743;6.74695;1;7;TCATCCACATC;CGCCACA;+
}}
}}

Latest revision as of 14:00, 7 September 2012

Full Name: TCATCCACATC,motif938,CNhs11979,T:361.0(10.88%),B:4366.5(5.92%),P:1e-27

Motif matrix
POACGT
119.85528.8818.772293.493
222.743302.15728.5197.581
3264.61328.15834.65633.573
420.21621.6620.216298.908
511.552316.95819.49412.996
631.407283.38513.71832.49
7302.5186.13731.04621.299
819.133298.54714.07929.241
9272.91641.51522.02124.548
1019.49422.38210.108309.016
1125.992307.93312.27414.801

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ZNF354C#MA0130.1-20.0008376350.3987140.7974286TCATCCACATCATCCAC+
MET32#MA0334.1-20.01417436.7469517TCATCCACATCCGCCACA+