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MacroAPE 1083:TTGTAGGT,motif707: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;30.952;0.584;0.584;551.88!2;22.776;0.584;32.704;527.936!3;0.584;0.584;565.896;16.936!4;28.032;65.408;11.68;478.88!5;449.096;0.584;0.584;133....")
 
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!10792-110H9;0.0489424!10765-110E9;0.587119!10829-111D1;0.329504!10830-111D2;0.398554!10831-111D3;0.988979!10832-111D4;0.860645!10833-111D5;0.28483!10764-110E8;0.19771!10770-110F5;0.47509!10399-106A3;0.98038!10400-106A4;0.255131!10405-106A9;0.186082!10834-111D6;0.170897!10835-111D7;0.908496!10836-111D8;0.94799!10837-111D9;0.553133!10699-109G6;0.193674!10802-111A1;0.256742!10796-110I4;0.421071!10010-101C1;0.724604!10810-111A9;0.847618!10421-106C7;0.630228!10708-109H6;0.669987!12235-129G3;0.077397!12236-129G4;0.806775!12237-129G5;0.147237!10167-103B5;0.431986!10151-102I7;0.527329!10428-106D5;0.426896!10795-110I3;0.752084!10805-111A4;0.0898382!10052-101G7;0.82962!10189-103D9;0.879601!10589-108D4;0.760766!10425-106D2;0.697895!10427-106D4;0.349187!10702-109G9;0.458718!10432-106D9;0.923952!10496-107C1;0.871979!10718-109I7;0.856142!10011-101C2;0.627804!10053-101G8;0.870078!10686-109F2;0.644546!10084-102B3;0.703669!10012-101C3;0.88864!10085-102B4;0.788695!10482-107A5;0.658667!10419-106C5;0.744858!10080-102A8;0.924289!10760-110E4;0.60446!10709-109H7;0.54316!10710-109H8;0.932752!10703-109H1;0.729167!10719-109I8;0.977799!10642-109A3;0.641391!10177-103C6;0.686414!10164-103B2;0.313166!10173-103C2;0.795603!10166-103B4;0.474845!10083-102B2;0.828108!10188-103D8;0.42596!10552-107I3;0.336876!10553-107I4;0.645776!10013-101C4;0.175154!10536-107G5;0.681726!10618-108G6;0.58361!10423-106C9;0.792464!10785-110H2;0.753186!12238-129G6;0.779845!12239-129G7;0.389745!12240-129G8;0.376144!10416-106C2;0.0909889!10801-110I9;0.133369!10766-110F1;0.374388!10824-111C5;0.48591!10825-111C6;0.655589!10826-111C7;0.753079!10454-106G4;0.932032!10409-106B4;0.940688!10638-108I8;0.593988!10636-108I6;0.17225!10513-107D9;0.26549!10420-106C6;0.61655!10082-102B1;0.000776736!10014-101C5;0.639174!10070-101I7;0.903995!10452-106G2;0.529058!10453-106G3;0.412862!10449-106F8;0.785038!10042-101F6;0.95486!10069-101I6;0.414594!10193-103E4;0.850776!10631-108I1;0.976102!10438-106E6;0.213116!10488-107B2;0.479759!10196-103E7;0.489564!10071-101I8;0.437846!10071-101I8;0.831163!10041-101F5;0.673195!10451-106G1;0.0404979!10450-106F9;0.516979!10604-108F1;0.141209!10605-108F2;0.133696!10606-108F3;0.658306!10603-108E9;0.223651!10497-107C2;0.195998!10448-106F7;0.738152!10643-109A4;0.286086!10426-106D3;0.241047!10431-106D8;0.294709!10197-103E8;0.294413!10443-106F2;0.853872!10815-111B5;0.255621!10816-111B6;0.64827!10817-111B7;0.84966!10015-101C6;0.607367!10410-106B5;0.809143!10054-101G9;0.584465!10758-110E2;0.932864!10711-109H9;0.846093!10040-101F4;0.302074!10470-106I2;0.86167!10415-106C1;0.318949!10198-103E9;0.604726!10614-108G2;0.864628!10612-108F9;0.524743!10549-107H9;0.805366!10615-108G3;0.42586!10487-107B1;0.719325!10433-106E1;0.742741!10688-109F4;0.020732!10444-106F3;0.449345!10444-106F3;0.967533!10485-107A8;0.966578!10413-106B8;0.302001!10175-103C4;0.245784!10161-103A8;0.211933!12131-128D7;0.69493!10624-108H3;0.734657!10712-109I1;0.952975!10205-103F7;0.226018!10206-103F8;0.387093!10207-103F9;0.382992!10050-101G5;0.664922!10051-101G6;0.489382!10016-101C7;0.142484!10046-101G1;0.247809!10778-110G4;0.328364!10633-108I3;0.466289!10818-111B8;0.846214!10819-111B9;0.21301!10820-111C1;0.250433!10484-107A7;0.303223!10808-111A7;0.891497!10169-103B7;0.0988679!10153-102I9;0.212999!13425-144D5;0.538916!13433-144E4;0.23362!13437-144E8;0.0704423!11904-125F5;0.00942045!11905-125F6;0.296959!10039-101F3;0.128871!10791-110H8;0.928437!10017-101C8;0.807285!10045-101F9;0.839307!10509-107D5;0.852958!10839-111E2;0.782884!10692-109F8;0.902242!10079-102A7;0.0218109!10078-102A6;0.239875!10721-110A1;0.363427!10569-108B2;0.620952!10570-108B3;0.134871!10571-108B4;0.596654!10647-109A8;0.346908!10752-110D5;0.269632!10782-110G8;0.98643!10726-110A6;0.965222!10018-101C9;0.104722!10086-102B5;0.18937!10182-103D2;0.766798!10165-103B3;0.560506!10499-107C4;0.695523!10408-106B3;0.757659!10019-101D1;0.663193!10068-101I5;0.923143!10075-102A3;0.747077!10077-102A5;0.625741!10727-110A7;0.525193!10775-110G1;0.204805!10412-106B7;0.493878!12231-129F8;0.458191!12232-129F9;0.322169!12233-129G1;0.118283!12234-129G2;0.196975!10414-106B9;0.240788!10170-103B8;0.381733!10183-103D3;0.722772!10150-102I6;0.899195!10174-103C3;0.972645!10155-103A2;0.245594!10038-101F2;0.604494!10838-111E1;0.548651!10759-110E3;0.395447!10514-107E1;0.944097!10465-106H6;0.25636!10691-109F7;0.562057!10843-111E6;0.800578!10844-111E7;0.480466!11747-123G1;0.805661!11748-123G2;0.758052!11749-123G3;0.794829!11750-123G4;0.981936!11751-123G5;0.9113!11840-124H4;0.816906!11752-123G6;0.987295!11753-123G7;0.978256!11754-123G8;0.787863!11755-123G9;0.662855!11756-123H1;0.990964!11833-124G6;0.202147!11760-123H5;0.717568!11836-124G9;0.423365!11758-123H3;0.191215!11835-124G8;0.470829!11762-123H7;0.623754!11838-124H2;0.949912!11757-123H2;0.779947!11759-123H4;0.628833!11761-123H6;0.790153!11842-124H6;0.575243!11837-124H1;0.347313!10568-108B1;0.719942!13230-141I8;0.605547!13231-141I9;0.848193!10696-109G3;0.78754!10493-107B7;0.369066!10494-107B8;0.28469!10850-111F4;0.606495!10851-111F5;0.534837!10852-111F6;0.54651!10853-111F7;0.212795!10854-111F8;0.671516!10855-111F9;0.529002!10856-111G1;0.995742!10847-111F1;0.554176!10846-111E9;0.810518!10848-111F2;0.813993!10845-111E8;0.222238!10857-111G2;0.0414572!10858-111G3;0.878525!10156-103A3;0.0379678!11901-125F2;0.912026!11902-125F3;0.236745!11903-125F4;0.321939!10689-109F5;0.19232!10648-109A9;0.851645!10784-110H1;0.935725!10744-110C6;0.286856!10772-110F7;0.512344!10474-106I6;0.0924466!10600-108E6;0.0788409!10684-109E9;0.272655!12226-129F3;0.358212!12227-129F4;0.548711!10508-107D4;0.359478!10539-107G8;0.350987!10607-108F4;0.422884!10555-107I6;0.483998!10774-110F9;0.135996!10637-108I7;0.0221101!10663-109C6;0.522307!10728-110A8;0.642625!10729-110A9;0.439907!10430-106D7;0.249716!10730-110B1;0.740551!10813-111B3;0.169938!10812-111B2;0.866893!10037-101F1;0.780938!10172-103C1;0.782288!10163-103B1;0.970843!10076-102A4;0.801493!10073-102A1;0.960299!10036-101E9;0.511045!10195-103E6;0.887663!10277-104E7;0.841228!10434-106E2;0.9127!10550-107I1;0.540114!10545-107H5;0.718869!10544-107H4;0.988022!10704-109H2;0.413326!10510-107D6;0.523902!10558-107I9;0.0356327!10020-101D2;0.414617!10732-110B3;0.798473!10049-101G4;0.638645!10698-109G5;0.110189!10437-106E5;0.862395!10417-106C3;0.702872!10035-101E8;0.425739!10171-103B9;0.895565!10157-103A4;0.603951!10034-101E7;0.926771!10072-101I9;0.924862!10199-103F1;0.510833!10200-103F2;0.126381!10697-109G4;0.528246!10723-110A3;0.0154879!10179-103C8;0.840069!10160-103A7;0.592438!10180-103C9;0.765716!10162-103A9;0.635878!10021-101D3;0.430899!10840-111E3;0.422441!10706-109H4;0.216805!10033-101E6;0.329328!10032-101E5;0.887989!10490-107B4;0.950863!10439-106E7;0.668238!10022-101D4;0.156095!10176-103C5;0.784308!10469-106I1;0.601032!10067-101I4;0.811733!10411-106B6;0.600977!10471-106I3;0.36437!10030-101E3;0.937623!10475-106I7;0.867956!10787-110H4;0.562472!10477-106I9;0.266496!10695-109G2;0.826491!11771-123I7;0.11945!11772-123I8;0.092864!11773-123I9;0.549103!10093-102C3;0.0267834!10442-106F1;0.000318479!10442-106F1;0.0491271!10201-103F3;0.0386694!10639-108I9;0.343334!11843-124H7;0.795835!11841-124H5;0.861624!10693-109F9;0.329342!10436-106E4;0.274144!10483-107A6;0.684759!10282-104F3;0.403351!10023-101D5;0.53584!10066-101I3;0.659084!10065-101I2;0.662154!10800-110I8;0.816382!10610-108F7;0.563546!10841-111E4;0.713374!10541-107H1;0.994715!10842-111E5;0.14138!10562-108A4;0.475322!10024-101D6;0.985214!10064-101I1;0.823034!10609-108F6;0.942709!10048-101G3;0.96638!10781-110G7;0.51002!10181-103D1;0.740051!10159-103A6;0.307348!10056-101H2;0.428962!10737-110B8;0.638872!10025-101D7;0.244985!10044-101F8;0.93953!10424-106D1;0.829686!10463-106H4;0.0451832!10616-108G4;0.585485!10486-107A9;0.792255!10062-101H8;0.904302!10202-103F4;0.777731!10158-103A5;0.00320888!10441-106E9;0.944655!10031-101E4;0.916978!10063-101H9;0.87473!10063-101H9;0.521525!11763-123H8;0.392958!11765-123I1;0.938088!11768-123I4;0.968138!10807-111A6;0.950116!10790-110H7;0.271376!10798-110I6;0.461926!10786-110H3;0.892197!10591-108D6;0.828804!10593-108D8;0.968754!10590-108D5;0.581347!10026-101D8;0.836512!10096-102C6;0.977604!10168-103B6;0.7827!10154-103A1;0.632909!10209-103G2;0.901769!10061-101H7;0.548788!10027-101D9;0.723366!10043-101F7;0.574912!10783-110G9;0.372097!10028-101E1;0.81218!10060-101H6;0.00241543!10203-103F5;0.325348!10059-101H5;0.742148!10047-101G2;0.82354!10029-101E2;0.541325!10058-101H4;0.576297!10418-106C4;0.949849!10492-107B6;0.130722!10694-109G1;0.766674!10797-110I5;0.222861!10057-101H3;0.916745!10100-102D1;0.564898!10055-101H1;0.404514!10204-103F6;0.547051!10191-103E2;0.623761!10563-108A5;0.943427
|name=TTGTAGGT,motif707,CNhs12625,T:584.0(13.12%),B:6271.8(8.13%),P:1e-29
|name=TTGTAGGT,motif707,CNhs12625,T:584.0(13.12%),B:6271.8(8.13%),P:1e-29
|tomtom_result=SMP1#MA0383.1;11;0.00396138;1.88562;1;8;TTGTAGGT;TGCTAATTTAATTATAGGTAA;-!RORA_1#MA0071.1;0;0.0158213;7.53095;1;8;TTGTAGGT;ATCAAGGTCA;+
}}
}}

Latest revision as of 14:14, 7 September 2012

Full Name: TTGTAGGT,motif707,CNhs12625,T:584.0(13.12%),B:6271.8(8.13%),P:1e-29

Motif matrix
POACGT
130.9520.5840.584551.88
222.7760.58432.704527.936
30.5840.584565.89616.936
428.03265.40811.68478.88
5449.0960.5840.584133.736
610.5120.584572.320.584
747.88850.224439.16846.72
812.26412.8480.584558.304

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SMP1#MA0383.1110.003961381.8856218TTGTAGGTTGCTAATTTAATTATAGGTAA-
RORA_1#MA0071.100.01582137.5309518TTGTAGGTATCAAGGTCA+
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