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MacroAPE 1083:Motif GTNATC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;240;0!02;0;0;0;240!03;60;60;60;60!04;240;0;0;0!05;0;0;0;240!06;0;240;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.722641!11327-117E...")
 
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32!10828-111C9;0.181239!10788-110H5;0.34702!10792-110H9;0.207322!10765-110E9;0.235586!10829-111D1;0.265666!10830-111D2;0.261586!10831-111D3;0.178416!10832-111D4;0.312584!10833-111D5;0.288995!10764-110E8;0.120161!10770-110F5;0.477251!10399-106A3;0.132782!10400-106A4;0.3987!10405-106A9;0.41814!10834-111D6;0.462655!10835-111D7;0.520024!10836-111D8;0.982837!10837-111D9;0.557513!10699-109G6;0.908136!10802-111A1;0.78545!10796-110I4;0.432708!10010-101C1;0.690256!10810-111A9;0.644885!10421-106C7;0.967454!10708-109H6;0.848962!12235-129G3;0.888313!12236-129G4;0.758243!12237-129G5;0.738723!10167-103B5;0.959398!10151-102I7;0.205462!10428-106D5;0.516452!10795-110I3;0.347754!10805-111A4;0.684681!10052-101G7;0.917177!10189-103D9;0.740425!10589-108D4;0.577126!10425-106D2;0.9303!10427-106D4;0.0922556!10702-109G9;0.986178!10432-106D9;0.266805!10496-107C1;0.766966!10718-109I7;0.54204!10011-101C2;0.180398!10053-101G8;0.736702!10686-109F2;0.817745!10084-102B3;0.573799!10012-101C3;0.562485!10085-102B4;0.448297!10482-107A5;0.376374!10419-106C5;0.995349!10080-102A8;0.803212!10760-110E4;0.839629!10709-109H7;0.956735!10710-109H8;0.907061!10703-109H1;0.569956!10719-109I8;0.307939!10642-109A3;0.9816!10177-103C6;0.603887!10164-103B2;0.372049!10173-103C2;0.266555!10166-103B4;0.324195!10083-102B2;0.446722!10188-103D8;0.445466!10552-107I3;0.387448!10553-107I4;0.543289!10013-101C4;0.987026!10536-107G5;0.641738!10618-108G6;0.655287!10423-106C9;0.854317!10785-110H2;0.935861!12238-129G6;0.824202!12239-129G7;0.866576!12240-129G8;0.1561!10416-106C2;0.806462!10801-110I9;0.794298!10766-110F1;0.130522!10824-111C5;0.754113!10825-111C6;0.61639!10826-111C7;0.571239!10454-106G4;0.64386!10409-106B4;0.379082!10638-108I8;0.910324!10636-108I6;0.585298!10513-107D9;0.634699!10420-106C6;0.91328!10082-102B1;0.922155!10014-101C5;0.443048!10070-101I7;0.803317!10452-106G2;0.725136!10453-106G3;0.814243!10449-106F8;0.926155!10042-101F6;0.824181!10069-101I6;0.674235!10193-103E4;0.583108!10631-108I1;0.415868!10438-106E6;0.614713!10488-107B2;0.701421!10196-103E7;0.572849!10071-101I8;0.592677!10071-101I8;0.760253!10041-101F5;0.492969!10451-106G1;0.954638!10450-106F9;0.247176!10604-108F1;0.353487!10605-108F2;0.839751!10606-108F3;0.593943!10603-108E9;0.933597!10497-107C2;0.796194!10448-106F7;0.241133!10643-109A4;0.724937!10426-106D3;0.939551!10431-106D8;0.93954!10197-103E8;0.602366!10443-106F2;0.435697!10815-111B5;0.791984!10816-111B6;0.866523!10817-111B7;0.885778!10015-101C6;0.795707!10410-106B5;0.563585!10054-101G9;0.228082!10758-110E2;0.50351!10711-109H9;0.949207!10040-101F4;0.839043!10470-106I2;0.322337!10415-106C1;0.876638!10198-103E9;0.520445!10614-108G2;0.955514!10612-108F9;0.533242!10549-107H9;0.500946!10615-108G3;0.79429!10487-107B1;0.888505!10433-106E1;0.817001!10688-109F4;0.77342!10444-106F3;0.643728!10444-106F3;0.681124!10485-107A8;0.578493!10413-106B8;0.72153!10175-103C4;0.668286!10161-103A8;0.379!12131-128D7;0.49131!10624-108H3;0.141475!10712-109I1;0.711069!10205-103F7;0.992741!10206-103F8;0.426438!10207-103F9;0.150349!10050-101G5;0.713032!10051-101G6;0.0430418!10016-101C7;0.0558085!10046-101G1;0.0554292!10778-110G4;0.31476!10633-108I3;0.40785!10818-111B8;0.867756!10819-111B9;0.198196!10820-111C1;0.235736!10484-107A7;0.204751!10808-111A7;0.988037!10169-103B7;0.547415!10153-102I9;0.355101!13425-144D5;0.538575!13433-144E4;0.460181!13437-144E8;0.321708!11904-125F5;0.335193!11905-125F6;0.598834!10039-101F3;0.880345!10791-110H8;0.345611!10017-101C8;0.606608!10045-101F9;0.930342!10509-107D5;0.811008!10839-111E2;0.429326!10692-109F8;0.276466!10079-102A7;0.309281!10078-102A6;0.148461!10721-110A1;0.0327174!10569-108B2;0.685381!10570-108B3;0.949607!10571-108B4;0.852401!10647-109A8;0.664837!10752-110D5;0.77855!10782-110G8;0.949175!10726-110A6;0.418897!10018-101C9;0.725521!10086-102B5;0.630689!10182-103D2;0.705148!10165-103B3;0.409011!10499-107C4;0.495327!10408-106B3;0.838211!10019-101D1;0.991675!10068-101I5;0.391019!10075-102A3;0.621468!10077-102A5;0.657452!10727-110A7;0.775142!10775-110G1;0.729945!10412-106B7;0.982337!12231-129F8;0.527762!12232-129F9;0.905849!12233-129G1;0.607803!12234-129G2;0.901643!10414-106B9;0.855337!10170-103B8;0.694918!10183-103D3;0.341798!10150-102I6;0.347512!10174-103C3;0.520688!10155-103A2;0.47109!10038-101F2;0.525971!10838-111E1;0.506889!10759-110E3;0.669305!10514-107E1;0.546238!10465-106H6;0.639134!10691-109F7;0.965181!10843-111E6;0.15215!10844-111E7;0.770837!11747-123G1;0.856966!11748-123G2;0.671249!11749-123G3;0.517418!11750-123G4;0.770364!11751-123G5;0.813083!11840-124H4;0.892565!11752-123G6;0.841352!11753-123G7;0.600986!11754-123G8;0.911917!11755-123G9;0.706809!11756-123H1;0.97206!11833-124G6;0.762927!11760-123H5;0.698065!11836-124G9;0.940734!11758-123H3;0.425104!11835-124G8;0.739181!11762-123H7;0.576547!11838-124H2;0.704133!11757-123H2;0.938451!11759-123H4;0.479945!11761-123H6;0.629193!11842-124H6;0.721561!11837-124H1;0.788838!10568-108B1;0.519048!13230-141I8;0.533289!13231-141I9;0.408887!10696-109G3;0.405269!10493-107B7;0.27663!10494-107B8;0.84347!10850-111F4;0.337122!10851-111F5;0.22927!10852-111F6;0.465913!10853-111F7;0.982485!10854-111F8;0.499378!10855-111F9;0.628812!10856-111G1;0.472523!10847-111F1;0.276011!10846-111E9;0.611093!10848-111F2;0.640027!10845-111E8;0.44197!10857-111G2;0.744512!10858-111G3;0.734689!10156-103A3;0.545081!11901-125F2;0.515751!11902-125F3;0.852742!11903-125F4;0.945785!10689-109F5;0.987424!10648-109A9;0.906355!10784-110H1;0.856437!10744-110C6;0.889155!10772-110F7;0.964138!10474-106I6;0.372335!10600-108E6;0.30564!10684-109E9;0.367623!12226-129F3;0.658311!12227-129F4;0.327656!10508-107D4;0.788274!10539-107G8;0.507574!10607-108F4;0.593861!10555-107I6;0.556808!10774-110F9;0.571254!10637-108I7;0.619647!10663-109C6;0.906259!10728-110A8;0.802015!10729-110A9;0.651093!10430-106D7;0.0636323!10730-110B1;0.59722!10813-111B3;0.765263!10812-111B2;0.0526873!10037-101F1;0.0267657!10172-103C1;0.351334!10163-103B1;0.291896!10076-102A4;0.610659!10073-102A1;0.508582!10036-101E9;0.324321!10195-103E6;0.433775!10277-104E7;0.507753!10434-106E2;0.359187!10550-107I1;0.701553!10545-107H5;0.999628!10544-107H4;0.675827!10704-109H2;0.822295!10510-107D6;0.250437!10558-107I9;0.443242!10020-101D2;0.138337!10732-110B3;0.539342!10049-101G4;0.889431!10698-109G5;0.640647!10437-106E5;0.73438!10417-106C3;0.513939!10035-101E8;0.545875!10171-103B9;0.343635!10157-103A4;0.353994!10034-101E7;0.517899!10072-101I9;0.408566!10199-103F1;0.339711!10200-103F2;0.70459!10697-109G4;0.296932!10723-110A3;0.404863!10179-103C8;0.920678!10160-103A7;0.0706092!10180-103C9;0.0881808!10162-103A9;0.00115622!10021-101D3;0.0283889!10840-111E3;0.803554!10706-109H4;0.899284!10033-101E6;0.270652!10032-101E5;0.424055!10490-107B4;0.41081!10439-106E7;0.776895!10022-101D4;0.82068!10176-103C5;0.717483!10469-106I1;0.21772!10067-101I4;0.483715!10411-106B6;0.751136!10471-106I3;0.361681!10030-101E3;0.692333!10475-106I7;0.334989!10787-110H4;0.79778!10477-106I9;0.674051!10695-109G2;0.396108!11771-123I7;0.0532031!11772-123I8;0.911014!11773-123I9;0.892031!10093-102C3;0.945087!10442-106F1;0.926205!10442-106F1;0.140435!10201-103F3;0.130846!10639-108I9;0.768621!11843-124H7;0.992332!11841-124H5;0.690842!10693-109F9;0.951153!10436-106E4;0.888096!10483-107A6;0.785396!10282-104F3;0.572573!10023-101D5;0.369303!10066-101I3;0.323641!10065-101I2;0.759641!10800-110I8;0.880837!10610-108F7;0.922133!10841-111E4;0.349948!10541-107H1;0.341441!10842-111E5;0.544527!10562-108A4;0.383016!10024-101D6;0.157995!10064-101I1;0.95319!10609-108F6;0.876774!10048-101G3;0.863901!10781-110G7;0.770257!10181-103D1;0.764538!10159-103A6;0.527081!10056-101H2;0.573621!10737-110B8;0.827757!10025-101D7;0.100861!10044-101F8;0.765975!10424-106D1;0.878051!10463-106H4;0.965401!10616-108G4;0.970459!10486-107A9;0.616526!10062-101H8;0.998645!10202-103F4;0.887881!10158-103A5;0.510813!10441-106E9;0.764177!10031-101E4;0.633033!10063-101H9;0.485453!10063-101H9;0.431241!11763-123H8;0.978346!11765-123I1;0.201573!11768-123I4;0.586773!10807-111A6;0.461313!10790-110H7;0.986697!10798-110I6;0.910771!10786-110H3;0.731054!10591-108D6;0.988116!10593-108D8;0.896584!10590-108D5;0.707625!10026-101D8;0.688695!10096-102C6;0.157617!10168-103B6;0.481281!10154-103A1;0.49858!10209-103G2;0.52258!10061-101H7;0.278243!10027-101D9;0.426314!10043-101F7;0.791725!10783-110G9;0.726031!10028-101E1;0.816273!10060-101H6;0.390454!10203-103F5;0.513617!10059-101H5;0.262399!10047-101G2;0.510102!10029-101E2;0.953284!10058-101H4;0.500284!10418-106C4;0.561477!10492-107B6;0.70392!10694-109G1;0.737597!10797-110I5;0.145114!10057-101H3;0.538251!10100-102D1;0.937083!10055-101H1;0.772186!10204-103F6;0.824735!10191-103E2;0.871777!10563-108A5;0.712463
|name=motif_GTNATC
|name=motif_GTNATC
|tomtom_result=NFE2L1::MafG#MA0089.1;0;0.00280638;1.33584;1;6;GTAATC;GTCATG;-!GLN3#MA0307.1;-1;0.00415817;1.97929;1;5;GTAATC;TTATC;-!CIN5#MA0284.1;4;0.00901864;4.29287;1;6;GTAATC;TTACGTAATC;+!HMG-1#MA0044.1;3;0.00910238;4.33274;1;6;GTAATC;GTTGTACTC;+!bZIP911#MA0097.1;6;0.0103178;4.91125;1;6;GTAATC;GGCCACGTCATC;-!GZF3#MA0309.1;1;0.0105414;5.01771;1;6;GTAATC;TCTTATCA;-!YAP7#MA0419.1;4;0.0121505;5.78362;1;6;GTAATC;ATTAGTAAGCA;+!bcd#MA0212.1;-1;0.0154485;7.3535;1;5;GTAATC;TAATCC;+!DAL80#MA0289.1;0;0.0189851;9.0369;1;6;GTAATC;CTTATCG;-!Gsc#MA0190.1;-1;0.0190248;9.05579;1;5;GTAATC;TAATCC;+!CAD1#MA0279.1;4;0.0196133;9.33592;1;6;GTAATC;ATTAGTAAGC;+!oc#MA0234.1;-1;0.0198764;9.46117;1;5;GTAATC;TAATCC;+
}}
}}

Latest revision as of 14:14, 7 September 2012

Full Name: motif_GTNATC

Motif matrix
POACGT
01002400
02000240
0360606060
04240000
05000240
06024000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFE2L1::MafG#MA0089.100.002806381.3358416GTAATCGTCATG-
GLN3#MA0307.1-10.004158171.9792915GTAATCTTATC-
CIN5#MA0284.140.009018644.2928716GTAATCTTACGTAATC+
HMG-1#MA0044.130.009102384.3327416GTAATCGTTGTACTC+
bZIP911#MA0097.160.01031784.9112516GTAATCGGCCACGTCATC-
GZF3#MA0309.110.01054145.0177116GTAATCTCTTATCA-
YAP7#MA0419.140.01215055.7836216GTAATCATTAGTAAGCA+
bcd#MA0212.1-10.01544857.353515GTAATCTAATCC+
DAL80#MA0289.100.01898519.036916GTAATCCTTATCG-
Gsc#MA0190.1-10.01902489.0557915GTAATCTAATCC+
CAD1#MA0279.140.01961339.3359216GTAATCATTAGTAAGC+
oc#MA0234.1-10.01987649.4611715GTAATCTAATCC+
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