MacroAPE 1083:10-GTAACHDC: Difference between revisions
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(Created page with "{{Macroape_1083
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9-110H6;0.64647!10828-111C9;0.591882!10788-110H5;0.026043!10792-110H9;0.886343!10765-110E9;0.245783!10829-111D1;0.572578!10830-111D2;0.80235!10831-111D3;0.32002!10832-111D4;0.329086!10833-111D5;0.787095!10764-110E8;0.802592!10770-110F5;0.770632!10399-106A3;0.876425!10400-106A4;0.86304!10405-106A9;0.593771!10834-111D6;0.990601!10835-111D7;0.90911!10836-111D8;0.70513!10837-111D9;0.928634!10699-109G6;0.278909!10802-111A1;0.0685509!10796-110I4;0.453146!10010-101C1;0.103698!10810-111A9;0.853981!10421-106C7;0.753798!10708-109H6;0.706209!12235-129G3;0.358281!12236-129G4;0.779706!12237-129G5;0.234039!10167-103B5;0.12549!10151-102I7;0.576051!10428-106D5;0.562154!10795-110I3;0.999136!10805-111A4;0.876499!10052-101G7;0.99706!10189-103D9;0.643727!10589-108D4;0.215763!10425-106D2;0.629831!10427-106D4;0.0721126!10702-109G9;0.00243431!10432-106D9;0.919691!10496-107C1;0.522369!10718-109I7;0.260573!10011-101C2;0.902437!10053-101G8;0.661252!10686-109F2;0.984796!10084-102B3;0.925667!10012-101C3;0.914493!10085-102B4;0.789576!10482-107A5;0.7373!10419-106C5;0.852522!10080-102A8;0.97796!10760-110E4;0.554872!10709-109H7;0.931902!10710-109H8;0.682544!10703-109H1;0.96621!10719-109I8;0.508484!10642-109A3;0.725289!10177-103C6;0.324633!10164-103B2;0.636164!10173-103C2;0.706145!10166-103B4;0.775453!10083-102B2;0.73746!10188-103D8;0.727295!10552-107I3;0.825013!10553-107I4;0.595627!10013-101C4;0.238274!10536-107G5;0.601975!10618-108G6;0.200809!10423-106C9;0.575117!10785-110H2;0.780305!12238-129G6;0.651988!12239-129G7;0.427214!12240-129G8;0.587966!10416-106C2;0.23667!10801-110I9;0.934005!10766-110F1;0.786395!10824-111C5;0.79232!10825-111C6;0.476939!10826-111C7;0.454632!10454-106G4;0.574251!10409-106B4;0.215845!10638-108I8;0.801894!10636-108I6;0.800171!10513-107D9;0.908753!10420-106C6;0.865753!10082-102B1;0.886607!10014-101C5;0.696488!10070-101I7;0.836331!10452-106G2;0.536798!10453-106G3;0.799196!10449-106F8;0.997669!10042-101F6;0.995717!10069-101I6;0.655166!10193-103E4;0.894917!10631-108I1;0.612578!10438-106E6;0.25635!10488-107B2;0.972359!10196-103E7;0.608448!10071-101I8;0.316185!10071-101I8;0.655042!10041-101F5;0.51327!10451-106G1;0.746793!10450-106F9;0.861274!10604-108F1;0.779957!10605-108F2;0.346659!10606-108F3;0.441036!10603-108E9;0.355671!10497-107C2;0.2549!10448-106F7;0.915844!10643-109A4;0.778215!10426-106D3;0.551452!10431-106D8;0.680123!10197-103E8;0.962896!10443-106F2;0.239327!10815-111B5;0.969193!10816-111B6;0.354021!10817-111B7;0.426007!10015-101C6;0.297937!10410-106B5;0.580089!10054-101G9;0.637157!10758-110E2;0.960306!10711-109H9;0.329542!10040-101F4;0.525004!10470-106I2;0.753432!10415-106C1;0.566372!10198-103E9;0.22458!10614-108G2;0.455648!10612-108F9;0.431779!10549-107H9;0.773002!10615-108G3;0.627133!10487-107B1;0.144531!10433-106E1;0.266968!10688-109F4;0.88395!10444-106F3;0.319002!10444-106F3;0.74666!10485-107A8;0.686964!10413-106B8;0.402921!10175-103C4;0.539716!10161-103A8;0.631136!12131-128D7;0.540429!10624-108H3;0.600887!10712-109I1;0.715813!10205-103F7;0.26753!10206-103F8;0.658051!10207-103F9;0.798884!10050-101G5;0.942457!10051-101G6;0.720298!10016-101C7;0.95012!10046-101G1;0.937594!10778-110G4;0.647121!10633-108I3;0.946411!10818-111B8;0.889875!10819-111B9;0.256437!10820-111C1;0.265152!10484-107A7;0.290231!10808-111A7;0.84507!10169-103B7;0.159809!10153-102I9;0.691326!13425-144D5;0.511348!13433-144E4;0.422214!13437-144E8;0.26393!11904-125F5;0.346446!11905-125F6;0.144239!10039-101F3;0.324943!10791-110H8;0.671551!10017-101C8;0.710881!10045-101F9;0.595129!10509-107D5;0.435993!10839-111E2;0.41987!10692-109F8;0.881248!10079-102A7;0.716815!10078-102A6;0.583477!10721-110A1;0.893189!10569-108B2;0.409965!10570-108B3;0.375093!10571-108B4;0.821864!10647-109A8;0.960131!10752-110D5;0.654382!10782-110G8;0.714332!10726-110A6;0.881491!10018-101C9;0.0443002!10086-102B5;0.200896!10182-103D2;0.261312!10165-103B3;0.861456!10499-107C4;0.735069!10408-106B3;0.395489!10019-101D1;0.648386!10068-101I5;0.192713!10075-102A3;0.0903598!10077-102A5;0.0824211!10727-110A7;0.866134!10775-110G1;0.385608!10412-106B7;0.46105!12231-129F8;0.536376!12232-129F9;0.364924!12233-129G1;0.469149!12234-129G2;0.307847!10414-106B9;0.250564!10170-103B8;0.985258!10183-103D3;0.741101!10150-102I6;0.692761!10174-103C3;0.596759!10155-103A2;0.754887!10038-101F2;0.619723!10838-111E1;0.750993!10759-110E3;0.950754!10514-107E1;0.356268!10465-106H6;0.509919!10691-109F7;0.324306!10843-111E6;0.0427701!10844-111E7;0.791147!11747-123G1;0.694095!11748-123G2;0.400663!11749-123G3;0.252697!11750-123G4;0.856806!11751-123G5;0.962831!11840-124H4;0.930046!11752-123G6;0.991169!11753-123G7;0.58806!11754-123G8;0.42445!11755-123G9;0.292996!11756-123H1;0.235503!11833-124G6;0.457695!11760-123H5;0.654434!11836-124G9;0.365138!11758-123H3;0.772621!11835-124G8;0.622584!11762-123H7;0.854279!11838-124H2;0.129365!11757-123H2;0.575127!11759-123H4;0.601173!11761-123H6;0.687924!11842-124H6;0.292769!11837-124H1;0.766478!10568-108B1;0.724577!13230-141I8;0.982852!13231-141I9;0.99355!10696-109G3;0.98314!10493-107B7;0.460721!10494-107B8;0.506588!10850-111F4;0.255383!10851-111F5;0.602649!10852-111F6;0.166038!10853-111F7;0.836269!10854-111F8;0.321671!10855-111F9;0.868609!10856-111G1;0.357656!10847-111F1;0.256671!10846-111E9;0.738081!10848-111F2;0.12851!10845-111E8;0.155841!10857-111G2;0.526657!10858-111G3;0.748185!10156-103A3;0.251564!11901-125F2;0.592129!11902-125F3;0.144616!11903-125F4;0.37554!10689-109F5;0.271117!10648-109A9;0.868589!10784-110H1;0.101344!10744-110C6;0.383163!10772-110F7;0.203185!10474-106I6;0.76805!10600-108E6;0.355507!10684-109E9;0.640641!12226-129F3;0.00337383!12227-129F4;0.37014!10508-107D4;0.600062!10539-107G8;0.336402!10607-108F4;0.968045!10555-107I6;0.88357!10774-110F9;0.512881!10637-108I7;0.465704!10663-109C6;0.826146!10728-110A8;0.58804!10729-110A9;0.540034!10430-106D7;0.661987!10730-110B1;0.937333!10813-111B3;0.986199!10812-111B2;0.653138!10037-101F1;0.744136!10172-103C1;0.714062!10163-103B1;0.752496!10076-102A4;0.512811!10073-102A1;0.746826!10036-101E9;0.698425!10195-103E6;0.825941!10277-104E7;0.73256!10434-106E2;0.72342!10550-107I1;0.916076!10545-107H5;0.75263!10544-107H4;0.395871!10704-109H2;0.838095!10510-107D6;0.591501!10558-107I9;0.276591!10020-101D2;0.464992!10732-110B3;0.495513!10049-101G4;0.10094!10698-109G5;0.882831!10437-106E5;0.772977!10417-106C3;0.670976!10035-101E8;0.527905!10171-103B9;0.750763!10157-103A4;0.71959!10034-101E7;0.547976!10072-101I9;0.839702!10199-103F1;0.522984!10200-103F2;0.682086!10697-109G4;0.739696!10723-110A3;0.231788!10179-103C8;0.745095!10160-103A7;0.754526!10180-103C9;0.415223!10162-103A9;0.196138!10021-101D3;0.147804!10840-111E3;0.76199!10706-109H4;0.00927725!10033-101E6;0.302854!10032-101E5;0.788349!10490-107B4;0.81366!10439-106E7;0.919218!10022-101D4;0.331232!10176-103C5;0.440513!10469-106I1;0.732001!10067-101I4;0.769114!10411-106B6;0.515215!10471-106I3;0.766386!10030-101E3;0.412994!10475-106I7;0.567946!10787-110H4;0.766724!10477-106I9;0.377597!10695-109G2;0.802969!11771-123I7;0.515487!11772-123I8;0.810354!11773-123I9;0.772689!10093-102C3;0.996874!10442-106F1;0.526965!10442-106F1;0.363722!10201-103F3;0.484155!10639-108I9;0.255508!11843-124H7;0.590607!11841-124H5;0.0449011!10693-109F9;0.0791524!10436-106E4;0.491246!10483-107A6;0.164831!10282-104F3;0.764377!10023-101D5;0.903142!10066-101I3;0.84408!10065-101I2;0.722829!10800-110I8;0.798854!10610-108F7;0.603068!10841-111E4;0.719901!10541-107H1;0.400597!10842-111E5;0.762232!10562-108A4;0.505582!10024-101D6;0.256764!10064-101I1;0.806432!10609-108F6;0.791832!10048-101G3;0.507273!10781-110G7;0.66526!10181-103D1;0.910977!10159-103A6;0.753543!10056-101H2;0.411323!10737-110B8;0.892856!10025-101D7;0.895489!10044-101F8;0.651425!10424-106D1;0.715237!10463-106H4;0.0110695!10616-108G4;0.734753!10486-107A9;0.740755!10062-101H8;0.826665!10202-103F4;0.73434!10158-103A5;0.450207!10441-106E9;0.533469!10031-101E4;0.739682!10063-101H9;0.771479!10063-101H9;0.672871!11763-123H8;0.517086!11765-123I1;0.98097!11768-123I4;0.904281!10807-111A6;0.779693!10790-110H7;0.366814!10798-110I6;0.255932!10786-110H3;0.893664!10591-108D6;0.289514!10593-108D8;0.851169!10590-108D5;0.238828!10026-101D8;0.714733!10096-102C6;0.0200413!10168-103B6;0.0121896!10154-103A1;0.7327!10209-103G2;0.530172!10061-101H7;0.576106!10027-101D9;0.384626!10043-101F7;0.0375305!10783-110G9;0.0324276!10028-101E1;0.205525!10060-101H6;0.311202!10203-103F5;0.452982!10059-101H5;0.669469!10047-101G2;0.73226!10029-101E2;0.212533!10058-101H4;0.319352!10418-106C4;0.741963!10492-107B6;0.420057!10694-109G1;0.542448!10797-110I5;0.375176!10057-101H3;0.00907594!10100-102D1;0.996682!10055-101H1;0.379552!10204-103F6;0.674198!10191-103E2;0.70302!10563-108A5;0.529483 | ||
|name=10-GTAACHDC,CNhs12354,BestGuess:OVOL1_f1_HM09(0.671505012970234),T:1108.0(36.13%),B:12113.6(27.10%),P:1e-27 | |name=10-GTAACHDC,CNhs12354,BestGuess:OVOL1_f1_HM09(0.671505012970234),T:1108.0(36.13%),B:12113.6(27.10%),P:1e-27 | ||
|tomtom_result=ovo#MA0126.1;1;0.00064837;0.308624;0.215898;8;GTAACTGC;AGTAACAGT;+!prd#MA0239.1;1;0.00064837;0.308624;0.215898;8;GTAACTGC;AGTAACAGT;+!Spz1#MA0111.1;3;0.00068035;0.323846;0.215898;8;GTAACTGC;AGGGTAACAGC;+!NFIL3#MA0025.1;4;0.0073635;3.50503;1;7;GTAACTGC;TTATGTAACGT;+!RUNX1#MA0002.1;-1;0.0138833;6.60844;1;7;GTAACTGC;TAACCACAATA;-!REB1#MA0363.1;4;0.0152823;7.27439;1;5;GTAACTGC;CCGGGTAAC;-!HLF#MA0043.1;6;0.0177292;8.4391;1;6;GTAACTGC;TATTACGTAACC;-!run::Bgb#MA0242.1;-1;0.0195525;9.30698;1;7;GTAACTGC;TAACCGCAA;+ | |||
}} | }} |
Latest revision as of 14:22, 7 September 2012
Full Name: 10-GTAACHDC,CNhs12354,BestGuess:OVOL1_f1_HM09(0.671505012970234),T:1108.0(36.13%),B:12113.6(27.10%),P:1e-27
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||
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Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
ovo#MA0126.1 | 1 | 0.00064837 | 0.308624 | 0.215898 | 8 | GTAACTGC | AGTAACAGT | + |
prd#MA0239.1 | 1 | 0.00064837 | 0.308624 | 0.215898 | 8 | GTAACTGC | AGTAACAGT | + |
Spz1#MA0111.1 | 3 | 0.00068035 | 0.323846 | 0.215898 | 8 | GTAACTGC | AGGGTAACAGC | + |
NFIL3#MA0025.1 | 4 | 0.0073635 | 3.50503 | 1 | 7 | GTAACTGC | TTATGTAACGT | + |
RUNX1#MA0002.1 | -1 | 0.0138833 | 6.60844 | 1 | 7 | GTAACTGC | TAACCACAATA | - |
REB1#MA0363.1 | 4 | 0.0152823 | 7.27439 | 1 | 5 | GTAACTGC | CCGGGTAAC | - |
HLF#MA0043.1 | 6 | 0.0177292 | 8.4391 | 1 | 6 | GTAACTGC | TATTACGTAACC | - |
run::Bgb#MA0242.1 | -1 | 0.0195525 | 9.30698 | 1 | 7 | GTAACTGC | TAACCGCAA | + |