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MacroAPE 1083:GATA1 si: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;344.45770193161354;126.57658350403683;300.0134134233718;184.84703830164463!2;165.3360755611537;490.46756083872054;252.069616323501;48.021484...")
 
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1!10534-107G3;0.30173!10429-106D6;0.222206!10464-106H5;0.333373!10827-111C8;0.0618737!10789-110H6;0.168759!10828-111C9;0.159206!10788-110H5;0.21768!10792-110H9;0.449459!10765-110E9;0.448743!10829-111D1;0.456852!10830-111D2;0.379255!10831-111D3;0.0440168!10832-111D4;0.0698643!10833-111D5;0.754495!10764-110E8;0.401911!10770-110F5;0.627083!10399-106A3;0.820556!10400-106A4;0.831111!10405-106A9;0.967051!10834-111D6;0.967119!10835-111D7;0.935132!10836-111D8;0.000127296!10837-111D9;1.94678e-09!10699-109G6;3.91771e-07!10802-111A1;0.000298846!10796-110I4;2.45322e-08!10010-101C1;0.949762!10810-111A9;0.31857!10421-106C7;0.786564!10708-109H6;0.768424!12235-129G3;0.996569!12236-129G4;0.948666!12237-129G5;0.4705!10167-103B5;0.826475!10151-102I7;0.109776!10428-106D5;0.0477479!10795-110I3;0.00159048!10805-111A4;0.327881!10052-101G7;0.917371!10189-103D9;0.604509!10589-108D4;0.370472!10425-106D2;0.761991!10427-106D4;0.919091!10702-109G9;0.0810073!10432-106D9;0.0739413!10496-107C1;0.534154!10718-109I7;0.537519!10011-101C2;0.588921!10053-101G8;0.727215!10686-109F2;0.0132971!10084-102B3;0.0208919!10012-101C3;0.46801!10085-102B4;0.121632!10482-107A5;0.314067!10419-106C5;0.539294!10080-102A8;0.477572!10760-110E4;0.405187!10709-109H7;0.858254!10710-109H8;0.426533!10703-109H1;0.765598!10719-109I8;0.872812!10642-109A3;0.872712!10177-103C6;0.158956!10164-103B2;0.0643545!10173-103C2;0.138981!10166-103B4;0.718106!10083-102B2;0.507235!10188-103D8;0.614484!10552-107I3;0.361816!10553-107I4;0.634922!10013-101C4;0.229782!10536-107G5;0.802157!10618-108G6;0.149164!10423-106C9;0.267491!10785-110H2;0.457021!12238-129G6;0.620994!12239-129G7;0.567734!12240-129G8;0.378789!10416-106C2;0.587108!10801-110I9;0.135741!10766-110F1;0.148802!10824-111C5;1.06672e-11!10825-111C6;4.38415e-06!10826-111C7;2.76162e-06!10454-106G4;1.24025e-05!10409-106B4;2.87158e-07!10638-108I8;5.0893e-10!10636-108I6;0.333186!10513-107D9;0.831473!10420-106C6;0.0469959!10082-102B1;0.572636!10014-101C5;0.377824!10070-101I7;0.0441231!10452-106G2;0.704988!10453-106G3;0.760829!10449-106F8;0.377932!10042-101F6;0.327061!10069-101I6;0.976051!10193-103E4;0.155642!10631-108I1;0.36649!10438-106E6;0.22819!10488-107B2;0.756506!10196-103E7;0.656865!10071-101I8;0.450174!10071-101I8;0.0243798!10041-101F5;0.261728!10451-106G1;0.648689!10450-106F9;0.689996!10604-108F1;0.949333!10605-108F2;0.703364!10606-108F3;0.489717!10603-108E9;0.456403!10497-107C2;0.944938!10448-106F7;0.758343!10643-109A4;0.409308!10426-106D3;0.280769!10431-106D8;0.748179!10197-103E8;0.764699!10443-106F2;0.481703!10815-111B5;0.403847!10816-111B6;0.579095!10817-111B7;0.306086!10015-101C6;0.591309!10410-106B5;0.781743!10054-101G9;0.919061!10758-110E2;0.345355!10711-109H9;0.0524127!10040-101F4;0.803981!10470-106I2;0.124048!10415-106C1;0.445198!10198-103E9;0.706932!10614-108G2;0.102462!10612-108F9;0.677637!10549-107H9;0.663799!10615-108G3;0.514772!10487-107B1;0.900479!10433-106E1;0.837011!10688-109F4;0.348941!10444-106F3;0.494642!10444-106F3;0.597916!10485-107A8;0.598779!10413-106B8;0.0497925!10175-103C4;0.72221!10161-103A8;0.278388!12131-128D7;0.572441!10624-108H3;0.247795!10712-109I1;0.3434!10205-103F7;0.10814!10206-103F8;0.0199003!10207-103F9;0.089967!10050-101G5;0.00168475!10051-101G6;0.0141856!10016-101C7;0.00271403!10046-101G1;0.00307059!10778-110G4;0.0102274!10633-108I3;0.409653!10818-111B8;0.550155!10819-111B9;0.407291!10820-111C1;0.361657!10484-107A7;0.344557!10808-111A7;0.878227!10169-103B7;0.355756!10153-102I9;0.115954!13425-144D5;0.11734!13433-144E4;0.973472!13437-144E8;0.720238!11904-125F5;0.786986!11905-125F6;0.225219!10039-101F3;0.0489976!10791-110H8;0.0656378!10017-101C8;0.636057!10045-101F9;0.437298!10509-107D5;0.725287!10839-111E2;0.687931!10692-109F8;0.768628!10079-102A7;0.705896!10078-102A6;0.0229424!10721-110A1;0.00516367!10569-108B2;0.905224!10570-108B3;0.0637019!10571-108B4;0.070128!10647-109A8;0.00623945!10752-110D5;0.0468577!10782-110G8;4.63964e-05!10726-110A6;0.395759!10018-101C9;0.286602!10086-102B5;1.07639e-05!10182-103D2;2.84433e-09!10165-103B3;0.731507!10499-107C4;0.950915!10408-106B3;0.875729!10019-101D1;0.964673!10068-101I5;0.0935006!10075-102A3;0.0901061!10077-102A5;0.499013!10727-110A7;0.0344247!10775-110G1;0.196043!10412-106B7;0.362667!12231-129F8;0.347143!12232-129F9;0.804008!12233-129G1;0.905047!12234-129G2;0.95315!10414-106B9;0.815093!10170-103B8;0.885929!10183-103D3;0.106715!10150-102I6;0.0207751!10174-103C3;0.13162!10155-103A2;0.49084!10038-101F2;0.909244!10838-111E1;0.820534!10759-110E3;0.773924!10514-107E1;0.733163!10465-106H6;0.585634!10691-109F7;0.0117807!10843-111E6;0.416806!10844-111E7;0.565661!11747-123G1;0.55235!11748-123G2;0.0827667!11749-123G3;0.135087!11750-123G4;0.352116!11751-123G5;0.088809!11840-124H4;0.330694!11752-123G6;0.651017!11753-123G7;0.578248!11754-123G8;0.813439!11755-123G9;0.252729!11756-123H1;0.371196!11833-124G6;0.442078!11760-123H5;0.0357344!11836-124G9;0.374822!11758-123H3;0.546973!11835-124G8;0.451522!11762-123H7;0.140336!11838-124H2;0.713396!11757-123H2;0.985761!11759-123H4;0.695293!11761-123H6;0.25173!11842-124H6;0.719751!11837-124H1;0.268412!10568-108B1;0.228802!13230-141I8;0.0315437!13231-141I9;0.357167!10696-109G3;0.205194!10493-107B7;0.601519!10494-107B8;0.373881!10850-111F4;0.076207!10851-111F5;0.551357!10852-111F6;0.991942!10853-111F7;0.250512!10854-111F8;0.941123!10855-111F9;0.0690491!10856-111G1;0.448575!10847-111F1;0.525596!10846-111E9;0.833179!10848-111F2;0.311877!10845-111E8;0.710959!10857-111G2;0.0910215!10858-111G3;0.472622!10156-103A3;0.403854!11901-125F2;0.121451!11902-125F3;0.954877!11903-125F4;0.706809!10689-109F5;0.932381!10648-109A9;0.334076!10784-110H1;0.767426!10744-110C6;0.491868!10772-110F7;0.466306!10474-106I6;0.960317!10600-108E6;0.750798!10684-109E9;0.335178!12226-129F3;0.826456!12227-129F4;0.820098!10508-107D4;0.470244!10539-107G8;0.770781!10607-108F4;0.828881!10555-107I6;0.374581!10774-110F9;0.0938039!10637-108I7;0.235779!10663-109C6;0.0497974!10728-110A8;0.143515!10729-110A9;0.504069!10430-106D7;0.69044!10730-110B1;0.473005!10813-111B3;0.974234!10812-111B2;0.0247271!10037-101F1;0.119392!10172-103C1;0.172112!10163-103B1;0.0446818!10076-102A4;0.136872!10073-102A1;0.0656879!10036-101E9;0.118917!10195-103E6;0.137531!10277-104E7;0.0919507!10434-106E2;0.355075!10550-107I1;0.328449!10545-107H5;0.975939!10544-107H4;0.555666!10704-109H2;0.78285!10510-107D6;0.062659!10558-107I9;0.157029!10020-101D2;0.284323!10732-110B3;0.802229!10049-101G4;0.11963!10698-109G5;2.10418e-06!10437-106E5;0.472879!10417-106C3;0.182677!10035-101E8;0.953504!10171-103B9;0.174475!10157-103A4;0.0427866!10034-101E7;0.0454544!10072-101I9;0.135864!10199-103F1;0.135738!10200-103F2;0.0806813!10697-109G4;0.429335!10723-110A3;0.320617!10179-103C8;0.291441!10160-103A7;0.445962!10180-103C9;0.896299!10162-103A9;0.890227!10021-101D3;0.395151!10840-111E3;0.110361!10706-109H4;0.0865387!10033-101E6;0.342661!10032-101E5;0.963977!10490-107B4;0.134522!10439-106E7;0.480647!10022-101D4;0.673821!10176-103C5;0.500325!10469-106I1;0.17295!10067-101I4;0.881386!10411-106B6;0.351051!10471-106I3;0.197877!10030-101E3;0.120902!10475-106I7;0.882976!10787-110H4;0.715294!10477-106I9;0.933822!10695-109G2;0.494189!11771-123I7;0.650978!11772-123I8;0.179724!11773-123I9;0.0277966!10093-102C3;0.192128!10442-106F1;0.082887!10442-106F1;0.649735!10201-103F3;0.655221!10639-108I9;0.646606!11843-124H7;0.0843115!11841-124H5;0.0949478!10693-109F9;0.198153!10436-106E4;0.168906!10483-107A6;0.942356!10282-104F3;0.432442!10023-101D5;0.168107!10066-101I3;0.280919!10065-101I2;0.0858702!10800-110I8;0.0464289!10610-108F7;0.657209!10841-111E4;0.0251046!10541-107H1;0.711927!10842-111E5;0.350758!10562-108A4;0.751966!10024-101D6;0.302812!10064-101I1;0.0349682!10609-108F6;0.00677695!10048-101G3;0.549566!10781-110G7;0.949006!10181-103D1;0.435579!10159-103A6;0.668751!10056-101H2;0.511939!10737-110B8;0.531636!10025-101D7;0.0728695!10044-101F8;0.439835!10424-106D1;0.0017739!10463-106H4;0.180993!10616-108G4;0.319802!10486-107A9;0.829063!10062-101H8;0.953989!10202-103F4;0.0677152!10158-103A5;0.0511978!10441-106E9;0.507016!10031-101E4;0.696338!10063-101H9;0.1773!10063-101H9;0.233564!11763-123H8;0.0211182!11765-123I1;0.35191!11768-123I4;0.486632!10807-111A6;0.233539!10790-110H7;0.25189!10798-110I6;0.986148!10786-110H3;0.0735475!10591-108D6;0.741127!10593-108D8;0.716728!10590-108D5;0.621308!10026-101D8;0.746262!10096-102C6;0.136559!10168-103B6;0.00377482!10154-103A1;0.585978!10209-103G2;0.317775!10061-101H7;0.0170798!10027-101D9;0.215109!10043-101F7;0.655355!10783-110G9;0.0923689!10028-101E1;0.59327!10060-101H6;0.283884!10203-103F5;0.24226!10059-101H5;0.390325!10047-101G2;0.269452!10029-101E2;0.39662!10058-101H4;0.0593078!10418-106C4;0.0309757!10492-107B6;0.248405!10694-109G1;0.16072!10797-110I5;0.455764!10057-101H3;0.275194!10100-102D1;0.0689241!10055-101H1;0.973256!10204-103F6;0.847454!10191-103E2;0.0975765!10563-108A5;0.0233563
|name=GATA1_si
|name=GATA1_si
|tomtom_result=Gata1#MA0035.2;0;2.54422e-15;1.21105e-12;2.41637e-12;10;ACAGATAAGG;ACAGATAAGAA;+!Tal1::Gata1#MA0140.1;9;3.31051e-07;0.00015758;0.000157208;9;ACAGATAAGG;CTGGTGGGGACAGATAAG;+!GAT1#MA0300.1;-1;2.88312e-05;0.0137236;0.00912746;8;ACAGATAAGG;CCGATAAG;+!GZF3#MA0309.1;-2;8.95134e-05;0.0426084;0.0212538;8;ACAGATAAGG;TGATAAGA;+!GLN3#MA0307.1;-3;0.000402404;0.191544;0.0737235;5;ACAGATAAGG;GATAA;+!Evi1#MA0029.1;-1;0.000465745;0.221695;0.0737235;9;ACAGATAAGG;AAGATAAGATAATA;+!DAL80#MA0289.1;-2;0.000673811;0.320734;0.0914215;7;ACAGATAAGG;CGATAAG;+!GATA3#MA0037.1;-2;0.00548392;2.61034;0.624366;6;ACAGATAAGG;AGATAG;+!YRR1#MA0439.1;2;0.00591661;2.81631;0.624366;9;ACAGATAAGG;GCGGAGATAAG;-!GATA2#MA0036.1;-2;0.0157271;7.48611;0.997635;5;ACAGATAAGG;GGATA;+!Optix#MA0199.1;-2;0.0157271;7.48611;0.997635;5;ACAGATAAGG;TGATA;+!ARR10#MA0121.1;-2;0.0184086;8.7625;0.997635;8;ACAGATAAGG;AGATCCGC;+!ECM23#MA0293.1;0;0.0199526;9.49741;0.997635;10;ACAGATAAGG;AAAGATCTAAA;+!Hltf#MA0109.1;-2;0.0209152;9.95565;0.997635;8;ACAGATAAGG;ATATAAGGTT;-
}}
}}

Latest revision as of 14:23, 7 September 2012

Full Name: GATA1_si

Motif matrix
POACGT
1344.45770193161354126.57658350403683300.0134134233718184.84703830164463
2165.3360755611537490.46756083872054252.06961632350148.02148443729177
3652.2835082619066.84340976305552750.0296.767819135705
40.00.0955.89473716066530.0
5955.89473716066530.00.00.0
60.00.00.0955.8947371606653
7954.5391436966720.00.01.3555934639932397
8905.69754849662590.050.1971886640391960.0
9116.99300597096766129.7999098396052649.301663529510859.8001578205829
10325.82481688083993165.98415342409524386.2383438669897477.84742298874187

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Gata1#MA0035.202.54422e-151.21105e-122.41637e-1210ACAGATAAGGACAGATAAGAA+
Tal1::Gata1#MA0140.193.31051e-070.000157580.0001572089ACAGATAAGGCTGGTGGGGACAGATAAG+
GAT1#MA0300.1-12.88312e-050.01372360.009127468ACAGATAAGGCCGATAAG+
GZF3#MA0309.1-28.95134e-050.04260840.02125388ACAGATAAGGTGATAAGA+
GLN3#MA0307.1-30.0004024040.1915440.07372355ACAGATAAGGGATAA+
Evi1#MA0029.1-10.0004657450.2216950.07372359ACAGATAAGGAAGATAAGATAATA+
DAL80#MA0289.1-20.0006738110.3207340.09142157ACAGATAAGGCGATAAG+
GATA3#MA0037.1-20.005483922.610340.6243666ACAGATAAGGAGATAG+
YRR1#MA0439.120.005916612.816310.6243669ACAGATAAGGGCGGAGATAAG-
GATA2#MA0036.1-20.01572717.486110.9976355ACAGATAAGGGGATA+
Optix#MA0199.1-20.01572717.486110.9976355ACAGATAAGGTGATA+
ARR10#MA0121.1-20.01840868.76250.9976358ACAGATAAGGAGATCCGC+
ECM23#MA0293.100.01995269.497410.99763510ACAGATAAGGAAAGATCTAAA+
Hltf#MA0109.1-20.02091529.955650.9976358ACAGATAAGGATATAAGGTT-
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