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MacroAPE 1083:Motif498: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;24217;0;37727;0!02;16148;4882;22480;18434!03;0;0;61944;0!04;0;0;61944;0!05;0;0;0;61944!06;0;0;0;61944!07;0;0;0;61944 |macroape_1083_sample...")
 
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.605192!10827-111C8;0.896347!10789-110H6;0.151098!10828-111C9;0.432687!10788-110H5;0.768254!10792-110H9;0.505138!10765-110E9;0.381686!10829-111D1;0.797704!10830-111D2;0.805681!10831-111D3;0.30146!10832-111D4;0.785028!10833-111D5;0.884903!10764-110E8;0.795174!10770-110F5;0.852364!10399-106A3;0.454991!10400-106A4;0.407139!10405-106A9;0.599379!10834-111D6;0.489387!10835-111D7;0.65682!10836-111D8;0.683777!10837-111D9;0.949492!10699-109G6;0.627347!10802-111A1;0.863869!10796-110I4;0.506966!10010-101C1;0.000906601!10810-111A9;0.282982!10421-106C7;0.0197928!10708-109H6;0.598466!12235-129G3;0.0700134!12236-129G4;0.981587!12237-129G5;0.443166!10167-103B5;0.897182!10151-102I7;0.673464!10428-106D5;0.947212!10795-110I3;0.703589!10805-111A4;0.595351!10052-101G7;0.114142!10189-103D9;0.299312!10589-108D4;0.07733!10425-106D2;0.0173872!10427-106D4;0.0633014!10702-109G9;0.926733!10432-106D9;0.974328!10496-107C1;0.283509!10718-109I7;0.00024963!10011-101C2;0.570417!10053-101G8;0.632814!10686-109F2;0.0112894!10084-102B3;0.872956!10012-101C3;0.637635!10085-102B4;0.827094!10482-107A5;0.333606!10419-106C5;0.0307789!10080-102A8;0.0268249!10760-110E4;0.418572!10709-109H7;0.0189693!10710-109H8;0.0201749!10703-109H1;0.0159879!10719-109I8;0.129835!10642-109A3;0.0436151!10177-103C6;0.0619982!10164-103B2;0.876834!10173-103C2;0.861445!10166-103B4;0.549581!10083-102B2;0.713991!10188-103D8;0.607112!10552-107I3;0.940156!10553-107I4;0.0196034!10013-101C4;0.000756545!10536-107G5;0.880456!10618-108G6;0.371954!10423-106C9;0.0717179!10785-110H2;0.0727609!12238-129G6;0.0374905!12239-129G7;0.474972!12240-129G8;0.678211!10416-106C2;0.537654!10801-110I9;0.67857!10766-110F1;0.691411!10824-111C5;0.53109!10825-111C6;0.400168!10826-111C7;0.452329!10454-106G4;0.447323!10409-106B4;0.187826!10638-108I8;0.956407!10636-108I6;0.185619!10513-107D9;0.0835879!10420-106C6;0.11043!10082-102B1;0.0954247!10014-101C5;0.855254!10070-101I7;0.74818!10452-106G2;0.563724!10453-106G3;0.278805!10449-106F8;0.379129!10042-101F6;0.396633!10069-101I6;0.792373!10193-103E4;0.739207!10631-108I1;0.855989!10438-106E6;0.521931!10488-107B2;0.0279055!10196-103E7;0.0236799!10071-101I8;0.519134!10071-101I8;0.908169!10041-101F5;0.429067!10451-106G1;0.0550454!10450-106F9;0.153102!10604-108F1;0.138296!10605-108F2;0.150017!10606-108F3;0.0226756!10603-108E9;0.174962!10497-107C2;0.264178!10448-106F7;0.0407251!10643-109A4;0.308706!10426-106D3;0.00421107!10431-106D8;0.015476!10197-103E8;0.12536!10443-106F2;0.834916!10815-111B5;0.566931!10816-111B6;0.176555!10817-111B7;0.19755!10015-101C6;0.178285!10410-106B5;0.775355!10054-101G9;0.000328505!10758-110E2;0.795767!10711-109H9;0.541557!10040-101F4;0.351088!10470-106I2;0.652594!10415-106C1;0.0298375!10198-103E9;0.109966!10614-108G2;0.555327!10612-108F9;0.19928!10549-107H9;0.0117307!10615-108G3;0.0931358!10487-107B1;0.0267318!10433-106E1;0.0742042!10688-109F4;0.364611!10444-106F3;0.0496593!10444-106F3;0.585815!10485-107A8;0.674021!10413-106B8;0.503171!10175-103C4;0.0342891!10161-103A8;0.922001!12131-128D7;0.794085!10624-108H3;0.555408!10712-109I1;0.528086!10205-103F7;0.944461!10206-103F8;0.503454!10207-103F9;0.927731!10050-101G5;0.284374!10051-101G6;0.624726!10016-101C7;0.924153!10046-101G1;0.756728!10778-110G4;0.651209!10633-108I3;0.56575!10818-111B8;0.222974!10819-111B9;0.170107!10820-111C1;0.198533!10484-107A7;0.190915!10808-111A7;0.0281973!10169-103B7;0.886207!10153-102I9;0.920662!13425-144D5;0.969564!13433-144E4;0.114645!13437-144E8;0.134915!11904-125F5;0.124508!11905-125F6;0.41763!10039-101F3;0.175226!10791-110H8;0.606559!10017-101C8;0.00166744!10045-101F9;0.723138!10509-107D5;0.939423!10839-111E2;0.0207095!10692-109F8;3.92065e-09!10079-102A7;0.0477034!10078-102A6;0.882719!10721-110A1;0.951163!10569-108B2;0.150548!10570-108B3;0.813462!10571-108B4;0.568809!10647-109A8;0.886274!10752-110D5;0.376388!10782-110G8;0.518687!10726-110A6;0.878224!10018-101C9;0.462249!10086-102B5;0.496143!10182-103D2;0.895578!10165-103B3;0.999995!10499-107C4;0.801616!10408-106B3;0.052406!10019-101D1;0.195546!10068-101I5;0.124054!10075-102A3;0.299699!10077-102A5;0.242424!10727-110A7;0.142353!10775-110G1;0.539044!10412-106B7;0.974399!12231-129F8;0.00343657!12232-129F9;0.395512!12233-129G1;0.532393!12234-129G2;0.477691!10414-106B9;0.644408!10170-103B8;0.00491986!10183-103D3;0.709081!10150-102I6;0.675622!10174-103C3;0.958598!10155-103A2;0.821913!10038-101F2;0.839756!10838-111E1;0.78306!10759-110E3;0.0231084!10514-107E1;0.318695!10465-106H6;0.130011!10691-109F7;0.0149446!10843-111E6;0.644362!10844-111E7;0.138272!11747-123G1;0.0827399!11748-123G2;0.692717!11749-123G3;0.961091!11750-123G4;0.328356!11751-123G5;0.0610022!11840-124H4;0.223893!11752-123G6;0.469263!11753-123G7;0.659352!11754-123G8;0.521311!11755-123G9;0.883494!11756-123H1;0.980732!11833-124G6;0.0348857!11760-123H5;0.417193!11836-124G9;0.109032!11758-123H3;0.967059!11835-124G8;0.407702!11762-123H7;0.446838!11838-124H2;0.0721863!11757-123H2;0.355437!11759-123H4;0.69233!11761-123H6;0.0711078!11842-124H6;0.322617!11837-124H1;0.795109!10568-108B1;0.0923395!13230-141I8;0.548659!13231-141I9;0.289683!10696-109G3;0.27235!10493-107B7;0.431802!10494-107B8;0.500044!10850-111F4;0.145926!10851-111F5;0.203061!10852-111F6;0.745771!10853-111F7;0.475132!10854-111F8;0.289708!10855-111F9;0.382435!10856-111G1;0.755356!10847-111F1;0.253345!10846-111E9;0.303618!10848-111F2;0.65694!10845-111E8;0.210886!10857-111G2;0.185295!10858-111G3;0.38951!10156-103A3;0.151675!11901-125F2;0.827052!11902-125F3;0.966224!11903-125F4;0.609194!10689-109F5;0.936736!10648-109A9;0.49971!10784-110H1;0.0448686!10744-110C6;0.0837728!10772-110F7;0.389648!10474-106I6;0.739786!10600-108E6;0.889088!10684-109E9;0.769156!12226-129F3;0.10473!12227-129F4;0.00170849!10508-107D4;0.759481!10539-107G8;0.0602821!10607-108F4;0.106731!10555-107I6;0.0386863!10774-110F9;0.0451517!10637-108I7;0.0297382!10663-109C6;0.000333711!10728-110A8;0.0176473!10729-110A9;0.0427106!10430-106D7;0.414511!10730-110B1;0.259358!10813-111B3;0.147651!10812-111B2;0.79336!10037-101F1;0.515081!10172-103C1;0.818214!10163-103B1;0.770884!10076-102A4;0.880776!10073-102A1;0.64361!10036-101E9;0.227255!10195-103E6;0.662026!10277-104E7;0.739818!10434-106E2;0.84077!10550-107I1;0.0275102!10545-107H5;0.0460494!10544-107H4;0.227833!10704-109H2;0.32502!10510-107D6;0.0782234!10558-107I9;0.156527!10020-101D2;0.43511!10732-110B3;0.4727!10049-101G4;0.991978!10698-109G5;0.126254!10437-106E5;0.00747275!10417-106C3;0.0493612!10035-101E8;0.0224003!10171-103B9;0.658082!10157-103A4;0.610902!10034-101E7;0.907049!10072-101I9;0.732684!10199-103F1;0.136795!10200-103F2;0.904698!10697-109G4;0.980135!10723-110A3;0.0384485!10179-103C8;0.00178013!10160-103A7;0.568197!10180-103C9;0.559796!10162-103A9;0.575294!10021-101D3;0.859488!10840-111E3;0.352983!10706-109H4;0.964154!10033-101E6;0.853068!10032-101E5;0.965642!10490-107B4;0.607726!10439-106E7;0.150063!10022-101D4;0.105311!10176-103C5;0.808518!10469-106I1;0.971999!10067-101I4;0.0255283!10411-106B6;0.718459!10471-106I3;0.634837!10030-101E3;0.0568199!10475-106I7;0.662424!10787-110H4;0.0843205!10477-106I9;0.297053!10695-109G2;0.599591!11771-123I7;0.271175!11772-123I8;0.0133894!11773-123I9;0.0283191!10093-102C3;0.0656484!10442-106F1;0.446755!10442-106F1;0.0261908!10201-103F3;0.0583842!10639-108I9;0.657953!11843-124H7;0.0187465!11841-124H5;0.0545493!10693-109F9;0.220026!10436-106E4;7.31616e-06!10483-107A6;0.0952383!10282-104F3;0.0439097!10023-101D5;0.882601!10066-101I3;0.643731!10065-101I2;0.731757!10800-110I8;0.777245!10610-108F7;0.0880644!10841-111E4;0.0128002!10541-107H1;0.0364153!10842-111E5;0.0237156!10562-108A4;0.106687!10024-101D6;0.0100298!10064-101I1;0.955496!10609-108F6;0.379845!10048-101G3;0.0163215!10781-110G7;0.931535!10181-103D1;0.00335817!10159-103A6;0.84362!10056-101H2;0.761441!10737-110B8;0.724665!10025-101D7;0.516753!10044-101F8;0.0552732!10424-106D1;0.0457517!10463-106H4;0.42826!10616-108G4;0.000541505!10486-107A9;0.0084465!10062-101H8;0.0226563!10202-103F4;0.752265!10158-103A5;0.956587!10441-106E9;0.974449!10031-101E4;0.0542107!10063-101H9;0.688822!10063-101H9;0.249317!11763-123H8;0.898182!11765-123I1;0.0969527!11768-123I4;0.0376876!10807-111A6;0.190904!10790-110H7;0.252708!10798-110I6;0.162165!10786-110H3;0.27749!10591-108D6;0.185527!10593-108D8;0.0815482!10590-108D5;0.113807!10026-101D8;0.322503!10096-102C6;0.340079!10168-103B6;0.110506!10154-103A1;0.907935!10209-103G2;0.982487!10061-101H7;0.647357!10027-101D9;0.730864!10043-101F7;0.105562!10783-110G9;0.0366822!10028-101E1;0.398534!10060-101H6;0.567097!10203-103F5;0.572214!10059-101H5;0.731356!10047-101G2;0.687112!10029-101E2;0.336839!10058-101H4;0.38492!10418-106C4;0.507398!10492-107B6;0.039533!10694-109G1;0.2496!10797-110I5;0.672627!10057-101H3;0.0174283!10100-102D1;0.589287!10055-101H1;0.971784!10204-103F6;0.846483!10191-103E2;0.497847!10563-108A5;0.0971416
|name=motif498
|name=motif498
|tomtom_result=dl_2#MA0023.1;0;0.00106661;0.507706;0.587326;7;GGGGTTT;GGGGATTTCC;+!RUNX1#MA0002.2;4;0.00163589;0.778683;0.587326;7;GGGGTTT;GTCTGTGGTTT;+!che-1#MA0260.1;-2;0.00197986;0.942415;0.587326;5;GGGGTTT;GGTTTC;-!dl_1#MA0022.1;0;0.00246838;1.17495;0.587326;7;GGGGTTT;GGGGTTTTTCCC;+!IRF1#MA0050.1;-2;0.00490445;2.33452;0.93357;5;GGGGTTT;GGTTTCACTTTC;-!Dof2#MA0020.1;-1;0.00725016;3.45108;0.999747;6;GGGGTTT;TGCTTT;-!run::Bgb#MA0242.1;2;0.0083383;3.96903;0.999747;7;GGGGTTT;TTGCGGTTA;-!RUNX1#MA0002.2;4;0.00858212;4.08509;0.999747;7;GGGGTTT;TATTGTGGTTA;+!REL#MA0101.1;1;0.0156666;7.45728;0.999747;7;GGGGTTT;GGGGATTTCC;+!RREB1#MA0073.1;9;0.0172491;8.21057;0.999747;7;GGGGTTT;TGGGGGGGGGTGGTTTGGGG;-!MNB1A#MA0053.1;-2;0.0205493;9.78148;0.999747;5;GGGGTTT;GCTTT;-!AFT2#MA0270.1;0;0.0207392;9.87187;0.999747;7;GGGGTTT;GGGGTGTG;-
}}
}}

Latest revision as of 14:27, 7 September 2012

Full Name: motif498

Motif matrix
POACGT
01242170377270
021614848822248018434
0300619440
0400619440
0500061944
0600061944
0700061944

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
dl_2#MA0023.100.001066610.5077060.5873267GGGGTTTGGGGATTTCC+
RUNX1#MA0002.240.001635890.7786830.5873267GGGGTTTGTCTGTGGTTT+
che-1#MA0260.1-20.001979860.9424150.5873265GGGGTTTGGTTTC-
dl_1#MA0022.100.002468381.174950.5873267GGGGTTTGGGGTTTTTCCC+
IRF1#MA0050.1-20.004904452.334520.933575GGGGTTTGGTTTCACTTTC-
Dof2#MA0020.1-10.007250163.451080.9997476GGGGTTTTGCTTT-
run::Bgb#MA0242.120.00833833.969030.9997477GGGGTTTTTGCGGTTA-
RUNX1#MA0002.240.008582124.085090.9997477GGGGTTTTATTGTGGTTA+
REL#MA0101.110.01566667.457280.9997477GGGGTTTGGGGATTTCC+
RREB1#MA0073.190.01724918.210570.9997477GGGGTTTTGGGGGGGGGTGGTTTGGGG-
MNB1A#MA0053.1-20.02054939.781480.9997475GGGGTTTGCTTT-
AFT2#MA0270.100.02073929.871870.9997477GGGGTTTGGGGTGTG-
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