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MacroAPE 1083:CNhs12065 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;78.49512581272839;93.52531422819987;84.14368146591033;473.5998132986062!2;60.79735858267995;76.61127600350095;490.25981653475117;102.0954836...")
 
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49!10827-111C8;0.504921!10789-110H6;0.707637!10828-111C9;0.961078!10788-110H5;0.218959!10792-110H9;0.74763!10765-110E9;0.980825!10829-111D1;0.49766!10830-111D2;0.387698!10831-111D3;0.0516308!10832-111D4;0.582177!10833-111D5;0.0751348!10764-110E8;0.154499!10770-110F5;0.144537!10399-106A3;0.163307!10400-106A4;0.104131!10405-106A9;0.11212!10834-111D6;0.173409!10835-111D7;0.0414496!10836-111D8;0.328173!10837-111D9;0.298003!10699-109G6;0.532878!10802-111A1;0.600089!10796-110I4;0.314656!10010-101C1;0.761584!10810-111A9;0.495095!10421-106C7;0.959183!10708-109H6;0.2102!12235-129G3;0.617028!12236-129G4;0.50246!12237-129G5;0.185251!10167-103B5;0.505563!10151-102I7;0.21965!10428-106D5;0.730662!10795-110I3;0.780464!10805-111A4;0.320256!10052-101G7;0.716193!10189-103D9;0.649297!10589-108D4;0.234864!10425-106D2;0.605847!10427-106D4;0.130221!10702-109G9;0.206261!10432-106D9;0.729985!10496-107C1;0.516978!10718-109I7;0.374968!10011-101C2;0.533425!10053-101G8;0.420173!10686-109F2;0.979625!10084-102B3;0.419295!10012-101C3;0.312374!10085-102B4;0.443187!10482-107A5;0.903154!10419-106C5;0.259973!10080-102A8;0.788001!10760-110E4;0.208692!10709-109H7;0.1751!10710-109H8;0.0415445!10703-109H1;0.996672!10719-109I8;0.695721!10642-109A3;0.285849!10177-103C6;0.841725!10164-103B2;0.865247!10173-103C2;0.840396!10166-103B4;0.444703!10083-102B2;0.583469!10188-103D8;0.723486!10552-107I3;0.111457!10553-107I4;0.508438!10013-101C4;0.078098!10536-107G5;0.604762!10618-108G6;0.312953!10423-106C9;0.0623532!10785-110H2;0.774284!12238-129G6;0.909222!12239-129G7;0.647615!12240-129G8;0.692663!10416-106C2;0.809368!10801-110I9;0.777224!10766-110F1;0.304244!10824-111C5;0.704661!10825-111C6;0.194144!10826-111C7;0.300003!10454-106G4;0.33395!10409-106B4;0.503948!10638-108I8;0.569253!10636-108I6;0.335196!10513-107D9;0.897879!10420-106C6;0.751812!10082-102B1;0.16904!10014-101C5;0.600771!10070-101I7;0.527743!10452-106G2;0.263771!10453-106G3;0.419895!10449-106F8;0.548209!10042-101F6;0.448513!10069-101I6;0.361462!10193-103E4;0.206221!10631-108I1;0.371138!10438-106E6;0.766862!10488-107B2;0.472998!10196-103E7;0.793994!10071-101I8;0.613393!10071-101I8;0.85298!10041-101F5;0.731057!10451-106G1;0.151571!10450-106F9;0.425741!10604-108F1;0.372294!10605-108F2;0.105971!10606-108F3;0.349747!10603-108E9;0.57999!10497-107C2;0.527092!10448-106F7;0.18919!10643-109A4;0.609714!10426-106D3;0.606172!10431-106D8;0.245171!10197-103E8;0.763812!10443-106F2;0.0972122!10815-111B5;0.79941!10816-111B6;0.921885!10817-111B7;0.577155!10015-101C6;0.756301!10410-106B5;0.407911!10054-101G9;0.425882!10758-110E2;0.889318!10711-109H9;0.91743!10040-101F4;0.764024!10470-106I2;0.358584!10415-106C1;0.678226!10198-103E9;0.248624!10614-108G2;0.70284!10612-108F9;0.392337!10549-107H9;0.347552!10615-108G3;0.767903!10487-107B1;0.871836!10433-106E1;0.599148!10688-109F4;0.601433!10444-106F3;0.372202!10444-106F3;0.557795!10485-107A8;0.60791!10413-106B8;0.137595!10175-103C4;0.530919!10161-103A8;0.680645!12131-128D7;0.808303!10624-108H3;0.873295!10712-109I1;0.501859!10205-103F7;0.404122!10206-103F8;0.445772!10207-103F9;0.693827!10050-101G5;0.981132!10051-101G6;0.199479!10016-101C7;0.203791!10046-101G1;0.459927!10778-110G4;0.576082!10633-108I3;0.875063!10818-111B8;0.383846!10819-111B9;0.452626!10820-111C1;0.433734!10484-107A7;0.363146!10808-111A7;0.840468!10169-103B7;0.291416!10153-102I9;0.652045!13425-144D5;0.354687!13433-144E4;0.110537!13437-144E8;0.0603806!11904-125F5;0.181209!11905-125F6;0.627016!10039-101F3;0.219245!10791-110H8;0.466385!10017-101C8;0.794022!10045-101F9;0.501041!10509-107D5;0.477651!10839-111E2;0.294434!10692-109F8;0.005702!10079-102A7;0.378991!10078-102A6;0.375452!10721-110A1;0.27933!10569-108B2;0.353755!10570-108B3;0.222286!10571-108B4;0.914453!10647-109A8;0.335772!10752-110D5;0.268925!10782-110G8;0.966933!10726-110A6;0.693469!10018-101C9;0.050795!10086-102B5;0.0970948!10182-103D2;0.377979!10165-103B3;0.372182!10499-107C4;0.466861!10408-106B3;0.779865!10019-101D1;0.594031!10068-101I5;0.756194!10075-102A3;0.159596!10077-102A5;0.537279!10727-110A7;0.707525!10775-110G1;0.846893!10412-106B7;0.0681543!12231-129F8;0.0357862!12232-129F9;0.901876!12233-129G1;0.916323!12234-129G2;0.504145!10414-106B9;0.735558!10170-103B8;0.109179!10183-103D3;0.468977!10150-102I6;0.409233!10174-103C3;0.437383!10155-103A2;0.134942!10038-101F2;0.195431!10838-111E1;0.220092!10759-110E3;0.566138!10514-107E1;0.0950463!10465-106H6;0.795879!10691-109F7;0.673982!10843-111E6;0.258545!10844-111E7;0.219558!11747-123G1;0.66616!11748-123G2;0.604748!11749-123G3;0.4886!11750-123G4;0.794674!11751-123G5;0.689789!11840-124H4;0.839387!11752-123G6;0.642344!11753-123G7;0.833905!11754-123G8;0.334668!11755-123G9;0.310571!11756-123H1;0.205282!11833-124G6;0.446376!11760-123H5;0.36451!11836-124G9;0.123655!11758-123H3;0.235507!11835-124G8;0.318183!11762-123H7;0.750971!11838-124H2;0.080133!11757-123H2;0.51377!11759-123H4;0.278434!11761-123H6;0.291513!11842-124H6;0.370137!11837-124H1;0.442976!10568-108B1;0.526694!13230-141I8;0.465648!13231-141I9;0.930246!10696-109G3;0.805852!10493-107B7;0.800083!10494-107B8;0.989306!10850-111F4;0.988729!10851-111F5;0.107065!10852-111F6;0.708385!10853-111F7;0.81449!10854-111F8;0.642582!10855-111F9;0.0959298!10856-111G1;0.356452!10847-111F1;0.83188!10846-111E9;0.922965!10848-111F2;0.108755!10845-111E8;0.330799!10857-111G2;0.0184358!10858-111G3;0.127564!10156-103A3;0.409838!11901-125F2;0.372323!11902-125F3;0.870842!11903-125F4;0.837505!10689-109F5;0.70923!10648-109A9;0.857663!10784-110H1;0.696206!10744-110C6;0.489618!10772-110F7;0.485507!10474-106I6;0.591009!10600-108E6;0.118871!10684-109E9;0.361864!12226-129F3;0.602259!12227-129F4;0.0139768!10508-107D4;0.00343923!10539-107G8;0.616286!10607-108F4;0.516271!10555-107I6;0.987195!10774-110F9;0.268187!10637-108I7;0.802341!10663-109C6;0.863798!10728-110A8;0.176818!10729-110A9;0.0160673!10430-106D7;0.823181!10730-110B1;0.578998!10813-111B3;0.278367!10812-111B2;0.874523!10037-101F1;0.842141!10172-103C1;0.451081!10163-103B1;0.215396!10076-102A4;0.369919!10073-102A1;0.313036!10036-101E9;0.670573!10195-103E6;0.320381!10277-104E7;0.55253!10434-106E2;0.551621!10550-107I1;0.500781!10545-107H5;0.301448!10544-107H4;0.0330541!10704-109H2;0.677528!10510-107D6;0.86724!10558-107I9;0.589452!10020-101D2;0.41929!10732-110B3;0.455279!10049-101G4;0.809213!10698-109G5;0.393747!10437-106E5;0.680949!10417-106C3;0.0338215!10035-101E8;0.78281!10171-103B9;0.336001!10157-103A4;0.371061!10034-101E7;0.26688!10072-101I9;0.30088!10199-103F1;0.75864!10200-103F2;0.316469!10697-109G4;0.344756!10723-110A3;0.707759!10179-103C8;0.994574!10160-103A7;0.25688!10180-103C9;0.293922!10162-103A9;0.188011!10021-101D3;0.0912803!10840-111E3;0.317707!10706-109H4;0.327543!10033-101E6;0.0105443!10032-101E5;0.132049!10490-107B4;0.400943!10439-106E7;0.264317!10022-101D4;0.682722!10176-103C5;0.28398!10469-106I1;0.854761!10067-101I4;0.401398!10411-106B6;0.186823!10471-106I3;0.781791!10030-101E3;0.983981!10475-106I7;0.734057!10787-110H4;0.925106!10477-106I9;0.905074!10695-109G2;0.99057!11771-123I7;0.727622!11772-123I8;0.78084!11773-123I9;0.374842!10093-102C3;0.559361!10442-106F1;0.000633504!10442-106F1;0.4303!10201-103F3;0.480913!10639-108I9;0.496458!11843-124H7;0.519604!11841-124H5;0.776381!10693-109F9;0.852309!10436-106E4;0.822723!10483-107A6;0.239604!10282-104F3;0.171302!10023-101D5;0.483652!10066-101I3;0.384332!10065-101I2;0.171204!10800-110I8;0.456193!10610-108F7;0.677944!10841-111E4;0.863661!10541-107H1;0.360578!10842-111E5;0.354241!10562-108A4;0.822338!10024-101D6;0.147701!10064-101I1;0.530532!10609-108F6;0.480628!10048-101G3;0.522541!10781-110G7;0.166757!10181-103D1;0.456121!10159-103A6;0.379542!10056-101H2;0.442068!10737-110B8;0.794489!10025-101D7;0.595207!10044-101F8;0.77897!10424-106D1;0.991669!10463-106H4;0.127657!10616-108G4;0.30592!10486-107A9;0.797308!10062-101H8;0.856824!10202-103F4;0.337209!10158-103A5;0.565376!10441-106E9;0.359806!10031-101E4;0.888277!10063-101H9;0.448683!10063-101H9;0.790776!11763-123H8;0.720414!11765-123I1;0.952662!11768-123I4;0.992005!10807-111A6;0.77166!10790-110H7;0.0446779!10798-110I6;0.713828!10786-110H3;0.887594!10591-108D6;0.0674954!10593-108D8;0.486044!10590-108D5;0.0520803!10026-101D8;0.13353!10096-102C6;0.678626!10168-103B6;0.589499!10154-103A1;0.505536!10209-103G2;0.550168!10061-101H7;0.737305!10027-101D9;0.908482!10043-101F7;0.878187!10783-110G9;0.704323!10028-101E1;0.219429!10060-101H6;0.245003!10203-103F5;0.668335!10059-101H5;0.959239!10047-101G2;0.961666!10029-101E2;0.459056!10058-101H4;0.108666!10418-106C4;0.956749!10492-107B6;0.727891!10694-109G1;0.222208!10797-110I5;0.771622!10057-101H3;0.134843!10100-102D1;0.655584!10055-101H1;0.398123!10204-103F6;0.459738!10191-103E2;0.19444!10563-108A5;0.394375
|name=CNhs12065_bl_f2
|name=CNhs12065_bl_f2
|tomtom_result=FOXL1#MA0033.1;-2;0.000363326;0.172943;0.345886;8;TGTATGTATATA;TATGTATA;-!NHP6B#MA0346.1;0;0.00119802;0.570258;0.570258;12;TGTATGTATATA;TTTATTTATATATAATATGA;+!Cf2_II#MA0015.1;-1;0.00209885;0.999054;0.666036;10;TGTATGTATATA;GTATATATAC;+!TBP#MA0386.1;2;0.00503389;2.39613;0.958452;12;TGTATGTATATA;ATCGAATATATATATCTAGTC;-!FOXI1#MA0042.1;-1;0.00768617;3.65862;1;11;TGTATGTATATA;GGATGTTTGTTT;+!FOXC1#MA0032.1;0;0.00993102;4.72717;1;8;TGTATGTATATA;GGTAAGTA;+!fkh#MA0446.1;0;0.0125714;5.98398;1;11;TGTATGTATATA;TGTTTGCTTAA;+!NHP6A#MA0345.1;1;0.0140348;6.68056;1;12;TGTATGTATATA;TCATTTTTATATATAGGTCAT;-!Foxd3#MA0041.1;-1;0.0157907;7.51639;1;11;TGTATGTATATA;GAATGTTTGTTT;+
}}
}}

Latest revision as of 14:33, 7 September 2012

Full Name: CNhs12065_bl_f2

Motif matrix
POACGT
178.4951258127283993.5253142281998784.14368146591033473.5998132986062
260.7973585826799576.61127600350095490.25981653475117102.09548368451281
394.55204588586946101.58013424985037127.23694898294104406.39480568678454
4558.779056113910764.4340567395638755.59087411888019450.959947833090304
569.1086787804866845.07786773420005592.6121889472956522.9651993434629
625.62226373385857426.87662166549185634.789511360349542.475538045745964
765.3314090123595254.1209424944262556.26481304410637554.0467702545534
8359.4907738074882110.8191205064444691.90985285051485167.54418764099793
997.99019115968804101.9377804560771884.92024067847674444.9157225112036
10408.24718122883075103.7052594263270791.71150306074705126.09999108954068
11111.78812920752029143.4094583322998388.94571522087605385.6206320447493
12398.5709060893226115.90358419851404117.3141021050634197.97534241254549

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
FOXL1#MA0033.1-20.0003633260.1729430.3458868TGTATGTATATATATGTATA-
NHP6B#MA0346.100.001198020.5702580.57025812TGTATGTATATATTTATTTATATATAATATGA+
Cf2_II#MA0015.1-10.002098850.9990540.66603610TGTATGTATATAGTATATATAC+
TBP#MA0386.120.005033892.396130.95845212TGTATGTATATAATCGAATATATATATCTAGTC-
FOXI1#MA0042.1-10.007686173.65862111TGTATGTATATAGGATGTTTGTTT+
FOXC1#MA0032.100.009931024.7271718TGTATGTATATAGGTAAGTA+
fkh#MA0446.100.01257145.98398111TGTATGTATATATGTTTGCTTAA+
NHP6A#MA0345.110.01403486.68056112TGTATGTATATATCATTTTTATATATAGGTCAT-
Foxd3#MA0041.1-10.01579077.51639111TGTATGTATATAGAATGTTTGTTT+
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