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MacroAPE 1083:CNhs12626 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;197.65905229972142;59.58509561216867;145.77724628248524;1391.0437471463983!2;44.657254083119426;56.07074137803269;851.27698611521;842.060159...")
 
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-128I8;0.260332!12182-129A4;0.201806!12183-129A5;0.388171!12184-129A6;0.390957!10809-111A8;0.425161!10597-108E3;3.21768e-06!10717-109I6;1.95723e-05!10455-106G5;0.0202425!10534-107G3;0.129488!10429-106D6;0.021662!10464-106H5;0.0123686!10827-111C8;0.0248193!10789-110H6;0.176003!10828-111C9;0.432991!10788-110H5;0.605278!10792-110H9;0.164324!10765-110E9;0.543733!10829-111D1;0.309993!10830-111D2;0.309233!10831-111D3;0.249353!10832-111D4;0.356951!10833-111D5;0.17963!10764-110E8;0.163765!10770-110F5;0.243483!10399-106A3;0.228656!10400-106A4;0.0933532!10405-106A9;0.0654362!10834-111D6;0.0621294!10835-111D7;0.283542!10836-111D8;0.0299682!10837-111D9;0.0466176!10699-109G6;0.116033!10802-111A1;0.16504!10796-110I4;0.0624077!10010-101C1;0.00394199!10810-111A9;0.000739724!10421-106C7;0.00189274!10708-109H6;0.0683269!12235-129G3;0.0606266!12236-129G4;0.911344!12237-129G5;0.476504!10167-103B5;0.903779!10151-102I7;0.713507!10428-106D5;0.652807!10795-110I3;0.410893!10805-111A4;0.155653!10052-101G7;0.000598647!10189-103D9;0.0013507!10589-108D4;0.000277846!10425-106D2;0.00300275!10427-106D4;0.293336!10702-109G9;0.104948!10432-106D9;0.0311116!10496-107C1;0.017421!10718-109I7;0.00154458!10011-101C2;0.160451!10053-101G8;0.000800611!10686-109F2;0.652035!10084-102B3;0.0928416!10012-101C3;0.463444!10085-102B4;0.415154!10482-107A5;0.9485!10419-106C5;0.000318124!10080-102A8;0.000175133!10760-110E4;0.00413532!10709-109H7;0.00371497!10710-109H8;0.00968621!10703-109H1;0.00398899!10719-109I8;0.000166352!10642-109A3;0.00339054!10177-103C6;0.00354591!10164-103B2;0.453014!10173-103C2;0.68506!10166-103B4;0.834034!10083-102B2;0.959233!10188-103D8;0.935329!10552-107I3;0.391445!10553-107I4;0.00506252!10013-101C4;0.000155545!10536-107G5;0.00217179!10618-108G6;0.1247!10423-106C9;0.00653964!10785-110H2;0.0129136!12238-129G6;0.000759202!12239-129G7;0.163686!12240-129G8;0.00756604!10416-106C2;0.0795228!10801-110I9;0.276937!10766-110F1;0.426745!10824-111C5;0.145001!10825-111C6;0.0104934!10826-111C7;0.0093856!10454-106G4;0.0103939!10409-106B4;0.0345105!10638-108I8;0.0742388!10636-108I6;0.00854463!10513-107D9;0.00223531!10420-106C6;0.00134131!10082-102B1;0.000116234!10014-101C5;0.00368777!10070-101I7;0.000563995!10452-106G2;0.0040885!10453-106G3;0.00821907!10449-106F8;0.0220015!10042-101F6;0.0139928!10069-101I6;0.298112!10193-103E4;0.0190342!10631-108I1;0.393225!10438-106E6;0.157993!10488-107B2;0.000992179!10196-103E7;0.00119477!10071-101I8;0.0107975!10071-101I8;0.00248545!10041-101F5;0.870056!10451-106G1;0.00363587!10450-106F9;5.00766e-05!10604-108F1;0.00157529!10605-108F2;0.161856!10606-108F3;0.0956712!10603-108E9;0.114568!10497-107C2;0.0946513!10448-106F7;0.00291958!10643-109A4;0.229571!10426-106D3;0.114509!10431-106D8;0.0201281!10197-103E8;0.0161898!10443-106F2;0.00155921!10815-111B5;0.767391!10816-111B6;0.00195941!10817-111B7;0.000393536!10015-101C6;0.00124075!10410-106B5;0.0125754!10054-101G9;0.000170855!10758-110E2;0.116534!10711-109H9;0.476874!10040-101F4;0.207812!10470-106I2;0.720755!10415-106C1;0.00849715!10198-103E9;0.187079!10614-108G2;0.00240859!10612-108F9;0.0336118!10549-107H9;0.00522358!10615-108G3;0.000468867!10487-107B1;0.000678806!10433-106E1;0.0652431!10688-109F4;0.35168!10444-106F3;0.0180739!10444-106F3;0.18374!10485-107A8;0.121468!10413-106B8;0.038766!10175-103C4;0.0062779!10161-103A8;0.379755!12131-128D7;0.307302!10624-108H3;0.00283735!10712-109I1;0.144018!10205-103F7;0.0590998!10206-103F8;0.0351309!10207-103F9;0.0174214!10050-101G5;0.113403!10051-101G6;0.0884697!10016-101C7;0.0238944!10046-101G1;0.0341508!10778-110G4;0.100772!10633-108I3;0.0109818!10818-111B8;0.00228969!10819-111B9;0.00583021!10820-111C1;0.00635425!10484-107A7;0.0048179!10808-111A7;0.000363637!10169-103B7;0.207622!10153-102I9;0.552143!13425-144D5;0.524905!13433-144E4;0.00611873!13437-144E8;0.00123768!11904-125F5;0.00444662!11905-125F6;0.115996!10039-101F3;0.0728476!10791-110H8;0.636321!10017-101C8;0.0096855!10045-101F9;0.0157139!10509-107D5;0.077356!10839-111E2;0.167177!10692-109F8;0.0274354!10079-102A7;0.0976034!10078-102A6;0.0130998!10721-110A1;0.0117603!10569-108B2;0.00131335!10570-108B3;0.000978165!10571-108B4;0.0029996!10647-109A8;0.0141533!10752-110D5;0.199591!10782-110G8;0.0310553!10726-110A6;0.0781076!10018-101C9;0.0476868!10086-102B5;0.121605!10182-103D2;0.372495!10165-103B3;0.37976!10499-107C4;0.382003!10408-106B3;0.00155749!10019-101D1;0.0836404!10068-101I5;0.00281772!10075-102A3;0.0909813!10077-102A5;0.000652223!10727-110A7;2.9501e-05!10775-110G1;0.0264928!10412-106B7;0.117401!12231-129F8;0.0276713!12232-129F9;0.207852!12233-129G1;0.0312933!12234-129G2;0.176076!10414-106B9;0.619971!10170-103B8;0.000973239!10183-103D3;0.746078!10150-102I6;0.63935!10174-103C3;0.631973!10155-103A2;0.195994!10038-101F2;0.264924!10838-111E1;0.252404!10759-110E3;7.51371e-05!10514-107E1;0.0881372!10465-106H6;0.000323566!10691-109F7;0.0176632!10843-111E6;0.468468!10844-111E7;0.00225373!11747-123G1;0.00932356!11748-123G2;0.134279!11749-123G3;0.0704023!11750-123G4;0.0813011!11751-123G5;0.0488557!11840-124H4;0.00188412!11752-123G6;0.00900704!11753-123G7;0.224737!11754-123G8;0.104548!11755-123G9;0.125321!11756-123H1;0.604235!11833-124G6;0.472621!11760-123H5;0.263455!11836-124G9;0.16283!11758-123H3;0.0669407!11835-124G8;0.09968!11762-123H7;0.00196306!11838-124H2;0.0594693!11757-123H2;0.00599968!11759-123H4;0.0516508!11761-123H6;0.311281!11842-124H6;0.18433!11837-124H1;0.0349734!10568-108B1;0.000477992!13230-141I8;0.323281!13231-141I9;0.000266929!10696-109G3;0.00032316!10493-107B7;0.0500423!10494-107B8;0.00797971!10850-111F4;0.0327661!10851-111F5;0.122628!10852-111F6;0.994702!10853-111F7;0.131496!10854-111F8;0.234529!10855-111F9;0.403304!10856-111G1;0.539839!10847-111F1;0.309167!10846-111E9;0.694221!10848-111F2;0.420031!10845-111E8;0.211871!10857-111G2;0.00979061!10858-111G3;0.0310324!10156-103A3;0.747667!11901-125F2;0.599022!11902-125F3;0.400844!11903-125F4;0.0533675!10689-109F5;0.217548!10648-109A9;0.250546!10784-110H1;0.214192!10744-110C6;0.0261188!10772-110F7;0.141448!10474-106I6;0.313253!10600-108E6;0.337274!10684-109E9;0.933468!12226-129F3;0.115296!12227-129F4;0.0207248!10508-107D4;0.366632!10539-107G8;0.00396593!10607-108F4;0.042764!10555-107I6;2.23516e-05!10774-110F9;0.00333282!10637-108I7;0.0101293!10663-109C6;0.00318578!10728-110A8;0.00573494!10729-110A9;0.00195794!10430-106D7;0.00213161!10730-110B1;0.00337116!10813-111B3;0.00828173!10812-111B2;0.0459798!10037-101F1;0.0134954!10172-103C1;0.589443!10163-103B1;0.716233!10076-102A4;0.582157!10073-102A1;0.644029!10036-101E9;0.70655!10195-103E6;0.634275!10277-104E7;0.524839!10434-106E2;0.472466!10550-107I1;0.000947096!10545-107H5;0.00174404!10544-107H4;0.443601!10704-109H2;0.0522547!10510-107D6;0.0942373!10558-107I9;0.0923521!10020-101D2;0.178883!10732-110B3;0.0237959!10049-101G4;0.538233!10698-109G5;0.158477!10437-106E5;0.00376266!10417-106C3;0.451688!10035-101E8;0.128941!10171-103B9;0.738865!10157-103A4;0.733275!10034-101E7;0.60313!10072-101I9;0.703525!10199-103F1;0.815184!10200-103F2;0.0182778!10697-109G4;0.00712077!10723-110A3;0.00107831!10179-103C8;0.200927!10160-103A7;0.837566!10180-103C9;0.958963!10162-103A9;0.924268!10021-101D3;0.861942!10840-111E3;0.128431!10706-109H4;0.142906!10033-101E6;0.511138!10032-101E5;0.55305!10490-107B4;0.626984!10439-106E7;0.000770448!10022-101D4;0.021918!10176-103C5;0.00629013!10469-106I1;0.812877!10067-101I4;0.00056969!10411-106B6;0.107195!10471-106I3;0.1088!10030-101E3;0.0518934!10475-106I7;0.332946!10787-110H4;0.000904544!10477-106I9;0.000815945!10695-109G2;0.00698554!11771-123I7;0.0160398!11772-123I8;0.0689815!11773-123I9;0.578807!10093-102C3;0.649654!10442-106F1;0.0153301!10442-106F1;0.6454!10201-103F3;0.70356!10639-108I9;0.012788!11843-124H7;0.0745811!11841-124H5;0.0114142!10693-109F9;0.167006!10436-106E4;0.0178291!10483-107A6;0.0819393!10282-104F3;0.0376674!10023-101D5;0.0230164!10066-101I3;0.0300286!10065-101I2;0.0191113!10800-110I8;0.00657382!10610-108F7;0.000340517!10841-111E4;0.0529511!10541-107H1;6.36383e-05!10842-111E5;0.000237503!10562-108A4;0.000278835!10024-101D6;0.0446478!10064-101I1;0.0122528!10609-108F6;0.0203012!10048-101G3;0.00897167!10781-110G7;0.00680283!10181-103D1;0.000232038!10159-103A6;0.179543!10056-101H2;0.219611!10737-110B8;0.148979!10025-101D7;0.0138066!10044-101F8;1.10073e-05!10424-106D1;0.0010727!10463-106H4;0.124905!10616-108G4;0.000327306!10486-107A9;0.847925!10062-101H8;0.0164438!10202-103F4;0.0252856!10158-103A5;0.00598902!10441-106E9;0.167186!10031-101E4;0.00106477!10063-101H9;0.531681!10063-101H9;0.902549!11763-123H8;0.000625893!11765-123I1;2.52989e-05!11768-123I4;2.79249e-08!10807-111A6;8.86517e-07!10790-110H7;0.00145241!10798-110I6;0.000342972!10786-110H3;0.00246568!10591-108D6;9.83221e-05!10593-108D8;0.00107139!10590-108D5;0.00659613!10026-101D8;0.00689688!10096-102C6;0.182222!10168-103B6;0.00916261!10154-103A1;0.387164!10209-103G2;0.371617!10061-101H7;0.00905591!10027-101D9;0.0252395!10043-101F7;0.529307!10783-110G9;0.411265!10028-101E1;0.794338!10060-101H6;0.0150721!10203-103F5;0.00799705!10059-101H5;0.0372527!10047-101G2;0.0549255!10029-101E2;0.0312519!10058-101H4;0.0154627!10418-106C4;0.0256348!10492-107B6;0.0743236!10694-109G1;0.0278049!10797-110I5;0.149265!10057-101H3;0.000340813!10100-102D1;0.00170349!10055-101H1;0.0100805!10204-103F6;0.0553064!10191-103E2;0.0122173!10563-108A5;0.000111408
|name=CNhs12626_bu_f2
|name=CNhs12626_bu_f2
|tomtom_result=TLX1::NFIC#MA0119.1;0;0.00120044;0.571408;1;11;TGGGCAGGCTG;TTGGCATGGTGCCA;-!ESR1#MA0112.2;0;0.0024297;1.15654;1;11;TGGGCAGGCTG;AGGTCAGGGTGACCTGGGCC;-!Stat3#MA0144.1;-1;0.00514576;2.44938;1;10;TGGGCAGGCTG;TTCCAGGAAG;+!Cebpa#MA0102.1;1;0.00651932;3.1032;1;11;TGGGCAGGCTG;TTTCGCAATCTT;+!znf143#MA0088.1;2;0.00987817;4.70201;1;11;TGGGCAGGCTG;GCAAGGCATGATGGGAAATC;-!ESR2#MA0258.1;1;0.0127176;6.05356;1;11;TGGGCAGGCTG;CAGGTCACCGTGACCTTG;-!Tal1::Gata1#MA0140.1;2;0.0141891;6.75399;1;11;TGGGCAGGCTG;CTGGTGGGGACAGATAAG;+!FEV#MA0156.1;-4;0.0149216;7.1027;1;7;TGGGCAGGCTG;CAGGAAAT;+
}}
}}

Latest revision as of 14:37, 7 September 2012

Full Name: CNhs12626_bu_f2

Motif matrix
POACGT
1197.6590522997214259.58509561216867145.777246282485241391.0437471463983
244.65725408311942656.07074137803269851.27698611521842.060159764411
367.2371401962212851.816978735712841005.1998264624101669.8111959464281
4144.55092536277715542.8501519824787882.4206232811006224.2434407144171
531.607877852518491737.8359574392338.88711746508649415.734188583933637
61781.05822662954780.119092001084401820.142588605939088912.745234104200714
7202.110060112368478.5847658229164911568.834175538753214.53613986673517
8387.08068955724013350.0649284465707895.64723769168161.2722856452832
9544.0489529284833828.2836737812597317.7835556548155103.94895897621498
10722.590247429105870.2306949218905285.22107299812437916.0231259916526
11122.88193133052911172.126356276930661255.6893453821801243.36750835113503

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TLX1::NFIC#MA0119.100.001200440.571408111TGGGCAGGCTGTTGGCATGGTGCCA-
ESR1#MA0112.200.00242971.15654111TGGGCAGGCTGAGGTCAGGGTGACCTGGGCC-
Stat3#MA0144.1-10.005145762.44938110TGGGCAGGCTGTTCCAGGAAG+
Cebpa#MA0102.110.006519323.1032111TGGGCAGGCTGTTTCGCAATCTT+
znf143#MA0088.120.009878174.70201111TGGGCAGGCTGGCAAGGCATGATGGGAAATC-
ESR2#MA0258.110.01271766.05356111TGGGCAGGCTGCAGGTCACCGTGACCTTG-
Tal1::Gata1#MA0140.120.01418916.75399111TGGGCAGGCTGCTGGTGGGGACAGATAAG+
FEV#MA0156.1-40.01492167.102717TGGGCAGGCTGCAGGAAAT+
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