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MacroAPE 1083:TACCGGATC,motif263: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;65.692;144.821;170.202;1112.285!2;1101.834;177.667;95.552;117.947!3;100.031;1242.176;91.073;59.72!4;177.667;989.859;80.622;244.852!5;132.877...")
 
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9!10788-110H5;0.79461!10792-110H9;0.662152!10765-110E9;0.595706!10829-111D1;0.55211!10830-111D2;0.690856!10831-111D3;0.56062!10832-111D4;0.622873!10833-111D5;0.665801!10764-110E8;0.708692!10770-110F5;0.768118!10399-106A3;0.773229!10400-106A4;0.452264!10405-106A9;0.47911!10834-111D6;0.533738!10835-111D7;0.692051!10836-111D8;0.776716!10837-111D9;0.682172!10699-109G6;0.419864!10802-111A1;0.341769!10796-110I4;0.230361!10010-101C1;0.648891!10810-111A9;0.642985!10421-106C7;0.58918!10708-109H6;0.570124!12235-129G3;0.526397!12236-129G4;0.508971!12237-129G5;0.707604!10167-103B5;0.587296!10151-102I7;0.31138!10428-106D5;0.561775!10795-110I3;0.949398!10805-111A4;0.796463!10052-101G7;0.77634!10189-103D9;0.589894!10589-108D4;0.724505!10425-106D2;0.922268!10427-106D4;0.60924!10702-109G9;0.777312!10432-106D9;0.731588!10496-107C1;0.597829!10718-109I7;0.973324!10011-101C2;0.632791!10053-101G8;0.547388!10686-109F2;0.270292!10084-102B3;0.93943!10012-101C3;0.552323!10085-102B4;0.4884!10482-107A5;0.519906!10419-106C5;0.229686!10080-102A8;0.247135!10760-110E4;0.830826!10709-109H7;0.328505!10710-109H8;0.73189!10703-109H1;0.870554!10719-109I8;0.516673!10642-109A3;0.623504!10177-103C6;0.705157!10164-103B2;0.43772!10173-103C2;0.618739!10166-103B4;0.278572!10083-102B2;0.459639!10188-103D8;0.363976!10552-107I3;0.443688!10553-107I4;0.977362!10013-101C4;0.333826!10536-107G5;0.633097!10618-108G6;0.764505!10423-106C9;0.73319!10785-110H2;0.885695!12238-129G6;0.538864!12239-129G7;0.309505!12240-129G8;0.840542!10416-106C2;0.465443!10801-110I9;0.658439!10766-110F1;0.66994!10824-111C5;0.348964!10825-111C6;0.785178!10826-111C7;0.736499!10454-106G4;0.686945!10409-106B4;0.896961!10638-108I8;0.412413!10636-108I6;0.418213!10513-107D9;0.580083!10420-106C6;0.358956!10082-102B1;0.815432!10014-101C5;0.876029!10070-101I7;0.714839!10452-106G2;0.601109!10453-106G3;0.547097!10449-106F8;0.804065!10042-101F6;0.812315!10069-101I6;0.608069!10193-103E4;0.37931!10631-108I1;0.477325!10438-106E6;0.733043!10488-107B2;0.798491!10196-103E7;0.783461!10071-101I8;0.64688!10071-101I8;0.472317!10041-101F5;0.590313!10451-106G1;0.671148!10450-106F9;0.933743!10604-108F1;0.926671!10605-108F2;0.56476!10606-108F3;0.331339!10603-108E9;0.584818!10497-107C2;0.565539!10448-106F7;0.409186!10643-109A4;0.574847!10426-106D3;0.336184!10431-106D8;0.809574!10197-103E8;0.331316!10443-106F2;0.716221!10815-111B5;0.45733!10816-111B6;0.919377!10817-111B7;0.92685!10015-101C6;0.90359!10410-106B5;0.577162!10054-101G9;0.98138!10758-110E2;0.420096!10711-109H9;0.314891!10040-101F4;0.640455!10470-106I2;0.440937!10415-106C1;0.945025!10198-103E9;0.640974!10614-108G2;0.896211!10612-108F9;0.162976!10549-107H9;0.428237!10615-108G3;0.858008!10487-107B1;0.626819!10433-106E1;0.640545!10688-109F4;0.635572!10444-106F3;0.695496!10444-106F3;0.291211!10485-107A8;0.280945!10413-106B8;0.900162!10175-103C4;0.995586!10161-103A8;0.41132!12131-128D7;0.621548!10624-108H3;0.992284!10712-109I1;0.601513!10205-103F7;0.610115!10206-103F8;0.31873!10207-103F9;0.424384!10050-101G5;0.868416!10051-101G6;0.435747!10016-101C7;0.439833!10046-101G1;0.483738!10778-110G4;0.40136!10633-108I3;0.698374!10818-111B8;0.83046!10819-111B9;0.496279!10820-111C1;0.498024!10484-107A7;0.489786!10808-111A7;0.981611!10169-103B7;0.474979!10153-102I9;0.507744!13425-144D5;0.60722!13433-144E4;0.165193!13437-144E8;0.197356!11904-125F5;0.247734!11905-125F6;0.783838!10039-101F3;0.953268!10791-110H8;0.437575!10017-101C8;0.844625!10045-101F9;0.794925!10509-107D5;0.762693!10839-111E2;0.98488!10692-109F8;0.978492!10079-102A7;0.919231!10078-102A6;0.475966!10721-110A1;0.56842!10569-108B2;0.848831!10570-108B3;0.939106!10571-108B4;0.905473!10647-109A8;0.668482!10752-110D5;0.621616!10782-110G8;0.421743!10726-110A6;0.595251!10018-101C9;0.540739!10086-102B5;0.819365!10182-103D2;0.508497!10165-103B3;0.461076!10499-107C4;0.578944!10408-106B3;0.939805!10019-101D1;0.485155!10068-101I5;0.914821!10075-102A3;0.496261!10077-102A5;0.924571!10727-110A7;0.654621!10775-110G1;0.931609!10412-106B7;0.589342!12231-129F8;0.881064!12232-129F9;0.451696!12233-129G1;0.543726!12234-129G2;0.507346!10414-106B9;0.398684!10170-103B8;0.533595!10183-103D3;0.398231!10150-102I6;0.477782!10174-103C3;0.58543!10155-103A2;0.438196!10038-101F2;0.473669!10838-111E1;0.473589!10759-110E3;0.854261!10514-107E1;0.772978!10465-106H6;0.880833!10691-109F7;0.874665!10843-111E6;0.666593!10844-111E7;0.998154!11747-123G1;0.687697!11748-123G2;0.802796!11749-123G3;0.574194!11750-123G4;0.809516!11751-123G5;0.707674!11840-124H4;0.572446!11752-123G6;0.424752!11753-123G7;0.750335!11754-123G8;0.969587!11755-123G9;0.99168!11756-123H1;0.187374!11833-124G6;0.886354!11760-123H5;0.926067!11836-124G9;0.836852!11758-123H3;0.731532!11835-124G8;0.996633!11762-123H7;0.880655!11838-124H2;0.921959!11757-123H2;0.784909!11759-123H4;0.754133!11761-123H6;0.990833!11842-124H6;0.871492!11837-124H1;0.704937!10568-108B1;0.981778!13230-141I8;0.890516!13231-141I9;0.547119!10696-109G3;0.347821!10493-107B7;0.26222!10494-107B8;0.540406!10850-111F4;0.749157!10851-111F5;0.615701!10852-111F6;0.153918!10853-111F7;0.182747!10854-111F8;0.755632!10855-111F9;0.157813!10856-111G1;0.484051!10847-111F1;0.401577!10846-111E9;0.630104!10848-111F2;0.0324426!10845-111E8;0.168558!10857-111G2;0.319181!10858-111G3;0.824279!10156-103A3;0.63936!11901-125F2;0.560399!11902-125F3;0.610141!11903-125F4;0.634334!10689-109F5;0.382176!10648-109A9;0.879027!10784-110H1;0.943421!10744-110C6;0.636431!10772-110F7;0.88502!10474-106I6;0.580032!10600-108E6;0.540554!10684-109E9;0.93747!12226-129F3;0.781287!12227-129F4;0.847617!10508-107D4;0.613719!10539-107G8;0.42909!10607-108F4;0.938399!10555-107I6;0.996368!10774-110F9;0.595533!10637-108I7;0.595737!10663-109C6;0.976744!10728-110A8;0.83699!10729-110A9;0.742042!10430-106D7;0.70451!10730-110B1;0.93149!10813-111B3;0.792771!10812-111B2;0.222911!10037-101F1;0.412165!10172-103C1;0.452166!10163-103B1;0.313993!10076-102A4;0.627212!10073-102A1;0.477775!10036-101E9;0.710507!10195-103E6;0.420835!10277-104E7;0.511514!10434-106E2;0.486228!10550-107I1;0.650165!10545-107H5;0.910704!10544-107H4;0.510307!10704-109H2;0.532621!10510-107D6;0.912706!10558-107I9;0.755481!10020-101D2;0.264776!10732-110B3;0.508096!10049-101G4;0.883884!10698-109G5;0.761851!10437-106E5;0.758085!10417-106C3;0.910791!10035-101E8;0.525032!10171-103B9;0.400973!10157-103A4;0.459641!10034-101E7;0.506841!10072-101I9;0.440088!10199-103F1;0.669543!10200-103F2;0.65452!10697-109G4;0.38156!10723-110A3;0.511848!10179-103C8;0.443366!10160-103A7;0.26446!10180-103C9;0.488035!10162-103A9;0.110425!10021-101D3;0.151431!10840-111E3;0.442336!10706-109H4;0.925289!10033-101E6;0.583458!10032-101E5;0.399027!10490-107B4;0.448001!10439-106E7;0.427285!10022-101D4;0.666297!10176-103C5;0.654654!10469-106I1;0.574446!10067-101I4;0.878935!10411-106B6;0.635411!10471-106I3;0.186878!10030-101E3;0.718822!10475-106I7;0.619774!10787-110H4;0.927797!10477-106I9;0.730304!10695-109G2;0.736943!11771-123I7;0.152934!11772-123I8;0.92591!11773-123I9;0.954249!10093-102C3;0.820523!10442-106F1;0.462244!10442-106F1;0.54939!10201-103F3;0.564627!10639-108I9;0.584292!11843-124H7;0.92177!11841-124H5;0.47189!10693-109F9;0.438713!10436-106E4;0.469642!10483-107A6;0.629364!10282-104F3;0.204571!10023-101D5;0.303949!10066-101I3;0.324769!10065-101I2;0.226021!10800-110I8;0.335321!10610-108F7;0.970269!10841-111E4;0.366525!10541-107H1;0.998033!10842-111E5;0.758501!10562-108A4;0.920588!10024-101D6;0.800761!10064-101I1;0.936822!10609-108F6;0.761237!10048-101G3;0.715733!10781-110G7;0.820345!10181-103D1;0.840028!10159-103A6;0.402188!10056-101H2;0.363953!10737-110B8;0.382219!10025-101D7;0.727255!10044-101F8;0.730208!10424-106D1;0.936943!10463-106H4;0.569769!10616-108G4;0.565944!10486-107A9;0.664758!10062-101H8;0.712772!10202-103F4;0.601903!10158-103A5;0.480593!10441-106E9;0.593345!10031-101E4;0.973691!10063-101H9;0.447465!10063-101H9;0.604403!11763-123H8;0.433479!11765-123I1;0.447404!11768-123I4;0.551673!10807-111A6;0.841744!10790-110H7;0.19619!10798-110I6;0.535792!10786-110H3;0.398861!10591-108D6;0.920459!10593-108D8;0.838999!10590-108D5;0.720477!10026-101D8;0.811574!10096-102C6;0.766494!10168-103B6;0.977438!10154-103A1;0.43988!10209-103G2;0.587774!10061-101H7;0.479705!10027-101D9;0.348044!10043-101F7;0.950645!10783-110G9;0.64456!10028-101E1;0.792422!10060-101H6;0.714101!10203-103F5;0.26926!10059-101H5;0.45628!10047-101G2;0.36626!10029-101E2;0.591041!10058-101H4;0.757057!10418-106C4;0.375097!10492-107B6;0.730621!10694-109G1;0.884181!10797-110I5;0.709688!10057-101H3;0.150164!10100-102D1;0.414597!10055-101H1;0.654477!10204-103F6;0.628323!10191-103E2;0.462877!10563-108A5;0.449118
|name=TACCGGATC,motif263,CNhs11974,T:1493.0(27.48%),B:15053.2(20.14%),P:1e-37
|name=TACCGGATC,motif263,CNhs11974,T:1493.0(27.48%),B:15053.2(20.14%),P:1e-37
|tomtom_result=ASG1#MA0275.1;-2;0.00104402;0.496955;0.487378;6;TACCGGATC;CCGGAA;+!YBR239C#MA0420.1;-1;0.00181484;0.863864;0.487378;8;TACCGGATC;ACCGGAAC;+!CAT8#MA0280.1;-2;0.00201608;0.959656;0.487378;6;TACCGGATC;CCGGAA;+!ASH1#MA0276.1;-2;0.00205701;0.979138;0.487378;7;TACCGGATC;CCGGATCGGG;+!TBS1#MA0404.1;-3;0.00403849;1.92232;0.506064;6;TACCGGATC;CGGATCCG;-!YER184C#MA0424.1;0;0.00438453;2.08704;0.506064;8;TACCGGATC;TTCCGGAG;-!ARR10#MA0121.1;-2;0.00475518;2.26347;0.506064;7;TACCGGATC;GCGGATCT;-!ELK1#MA0028.1;1;0.00480573;2.28753;0.506064;9;TACCGGATC;CTTCCGGCTC;-!ECM22#MA0292.1;0;0.00720263;3.42845;0.682621;7;TACCGGATC;CTCCGGA;+!ELK4#MA0076.1;-1;0.0114769;5.463;0.988826;8;TACCGGATC;ACCGGAAGT;+!Hand1::Tcfe2a#MA0092.1;1;0.0153234;7.29394;0.995524;9;TACCGGATC;ATGCCAGACC;-!SIP4#MA0380.1;0;0.0173351;8.25153;0.995524;7;TACCGGATC;CTCCGGA;+!YJL103C#MA0427.1;2;0.0180641;8.59849;0.995524;9;TACCGGATC;AGCTCCGGAGA;+
}}
}}

Latest revision as of 14:44, 7 September 2012

Full Name: TACCGGATC,motif263,CNhs11974,T:1493.0(27.48%),B:15053.2(20.14%),P:1e-37

Motif matrix
POACGT
165.692144.821170.2021112.285
21101.834177.66795.552117.947
3100.0311242.17691.07359.72
4177.667989.85980.622244.852
5132.877156.7651080.932122.426
656.73468.6781304.88262.706
71161.554126.905104.51100.031
874.65114.96191.0731212.316
964.1991254.1294.05980.622

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ASG1#MA0275.1-20.001044020.4969550.4873786TACCGGATCCCGGAA+
YBR239C#MA0420.1-10.001814840.8638640.4873788TACCGGATCACCGGAAC+
CAT8#MA0280.1-20.002016080.9596560.4873786TACCGGATCCCGGAA+
ASH1#MA0276.1-20.002057010.9791380.4873787TACCGGATCCCGGATCGGG+
TBS1#MA0404.1-30.004038491.922320.5060646TACCGGATCCGGATCCG-
YER184C#MA0424.100.004384532.087040.5060648TACCGGATCTTCCGGAG-
ARR10#MA0121.1-20.004755182.263470.5060647TACCGGATCGCGGATCT-
ELK1#MA0028.110.004805732.287530.5060649TACCGGATCCTTCCGGCTC-
ECM22#MA0292.100.007202633.428450.6826217TACCGGATCCTCCGGA+
ELK4#MA0076.1-10.01147695.4630.9888268TACCGGATCACCGGAAGT+
Hand1::Tcfe2a#MA0092.110.01532347.293940.9955249TACCGGATCATGCCAGACC-
SIP4#MA0380.100.01733518.251530.9955247TACCGGATCCTCCGGA+
YJL103C#MA0427.120.01806418.598490.9955249TACCGGATCAGCTCCGGAGA+
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