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MacroAPE 1083:Motif11: Difference between revisions

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1301!12184-129A6;0.15251!10809-111A8;0.198499!10597-108E3;0.152075!10717-109I6;0.834013!10455-106G5;0.288387!10534-107G3;0.800082!10429-106D6;0.370509!10464-106H5;0.631575!10827-111C8;0.926607!10789-110H6;0.546312!10828-111C9;0.58663!10788-110H5;0.958602!10792-110H9;0.321746!10765-110E9;0.463824!10829-111D1;0.735585!10830-111D2;0.335672!10831-111D3;0.98328!10832-111D4;0.534178!10833-111D5;0.467916!10764-110E8;0.300418!10770-110F5;0.895763!10399-106A3;0.54796!10400-106A4;0.529799!10405-106A9;0.45273!10834-111D6;0.498218!10835-111D7;0.348871!10836-111D8;0.955128!10837-111D9;0.214167!10699-109G6;0.219221!10802-111A1;0.811501!10796-110I4;0.644953!10010-101C1;0.15509!10810-111A9;0.591947!10421-106C7;0.299836!10708-109H6;0.635214!12235-129G3;0.395291!12236-129G4;0.322505!12237-129G5;0.0240255!10167-103B5;0.209925!10151-102I7;0.239374!10428-106D5;0.429251!10795-110I3;0.406611!10805-111A4;0.8707!10052-101G7;0.990049!10189-103D9;0.801863!10589-108D4;0.370024!10425-106D2;0.794426!10427-106D4;0.876534!10702-109G9;0.703311!10432-106D9;0.472199!10496-107C1;0.513572!10718-109I7;0.625429!10011-101C2;0.584631!10053-101G8;0.633889!10686-109F2;0.247726!10084-102B3;0.315792!10012-101C3;0.632589!10085-102B4;0.38058!10482-107A5;0.343025!10419-106C5;0.434985!10080-102A8;0.315609!10760-110E4;0.715384!10709-109H7;0.375614!10710-109H8;0.266029!10703-109H1;0.230277!10719-109I8;0.170102!10642-109A3;0.2848!10177-103C6;0.485549!10164-103B2;0.242561!10173-103C2;0.505959!10166-103B4;0.122627!10083-102B2;0.396402!10188-103D8;0.573615!10552-107I3;0.541665!10553-107I4;0.47858!10013-101C4;0.538915!10536-107G5;0.570511!10618-108G6;0.909179!10423-106C9;0.409696!10785-110H2;0.181353!12238-129G6;0.0596484!12239-129G7;0.759901!12240-129G8;0.975917!10416-106C2;0.932425!10801-110I9;0.627524!10766-110F1;0.660175!10824-111C5;0.757364!10825-111C6;0.501089!10826-111C7;0.511711!10454-106G4;0.727602!10409-106B4;0.573595!10638-108I8;0.513465!10636-108I6;0.213349!10513-107D9;0.00142231!10420-106C6;0.129428!10082-102B1;0.663186!10014-101C5;0.99021!10070-101I7;0.644355!10452-106G2;0.607949!10453-106G3;0.313604!10449-106F8;0.710812!10042-101F6;0.646491!10069-101I6;0.454173!10193-103E4;0.98321!10631-108I1;0.633468!10438-106E6;0.581332!10488-107B2;0.518178!10196-103E7;0.509047!10071-101I8;0.924736!10071-101I8;0.794244!10041-101F5;0.357468!10451-106G1;0.657152!10450-106F9;0.517575!10604-108F1;0.312729!10605-108F2;0.37953!10606-108F3;0.547061!10603-108E9;0.325263!10497-107C2;0.316379!10448-106F7;0.800786!10643-109A4;0.843976!10426-106D3;0.0361196!10431-106D8;0.259677!10197-103E8;0.362368!10443-106F2;0.719045!10815-111B5;0.875565!10816-111B6;0.116196!10817-111B7;0.206144!10015-101C6;0.143523!10410-106B5;0.840691!10054-101G9;0.592728!10758-110E2;0.9718!10711-109H9;0.750175!10040-101F4;0.587212!10470-106I2;0.338217!10415-106C1;0.387323!10198-103E9;0.992769!10614-108G2;0.749545!10612-108F9;0.693229!10549-107H9;0.557073!10615-108G3;0.484437!10487-107B1;0.904436!10433-106E1;0.875414!10688-109F4;0.432312!10444-106F3;0.326335!10444-106F3;0.241058!10485-107A8;0.25985!10413-106B8;0.560192!10175-103C4;0.473331!10161-103A8;0.26705!12131-128D7;0.473955!10624-108H3;0.984075!10712-109I1;0.743663!10205-103F7;0.842998!10206-103F8;0.764652!10207-103F9;0.571853!10050-101G5;0.445271!10051-101G6;0.950071!10016-101C7;0.86604!10046-101G1;0.588212!10778-110G4;0.631499!10633-108I3;0.651203!10818-111B8;0.112747!10819-111B9;0.0719662!10820-111C1;0.086163!10484-107A7;0.0813519!10808-111A7;0.852764!10169-103B7;0.264411!10153-102I9;0.235586!13425-144D5;0.429867!13433-144E4;0.0219494!13437-144E8;0.0456036!11904-125F5;0.0307044!11905-125F6;0.141563!10039-101F3;0.254683!10791-110H8;0.389872!10017-101C8;0.283389!10045-101F9;0.808723!10509-107D5;0.846469!10839-111E2;0.677404!10692-109F8;0.968649!10079-102A7;0.338131!10078-102A6;0.658896!10721-110A1;0.601959!10569-108B2;0.610589!10570-108B3;0.923199!10571-108B4;0.479412!10647-109A8;0.955236!10752-110D5;0.966092!10782-110G8;0.554433!10726-110A6;0.17087!10018-101C9;0.351442!10086-102B5;0.515773!10182-103D2;0.606654!10165-103B3;0.253601!10499-107C4;0.452831!10408-106B3;0.582967!10019-101D1;0.938551!10068-101I5;0.451606!10075-102A3;0.18653!10077-102A5;0.446435!10727-110A7;0.369995!10775-110G1;0.897047!10412-106B7;0.98201!12231-129F8;0.977542!12232-129F9;0.829671!12233-129G1;0.76933!12234-129G2;0.626474!10414-106B9;0.807584!10170-103B8;0.978498!10183-103D3;0.173319!10150-102I6;0.230937!10174-103C3;0.322867!10155-103A2;0.31543!10038-101F2;0.503228!10838-111E1;0.460271!10759-110E3;0.503589!10514-107E1;0.561922!10465-106H6;0.854!10691-109F7;0.85588!10843-111E6;0.862207!10844-111E7;0.272595!11747-123G1;0.376802!11748-123G2;0.348193!11749-123G3;0.176761!11750-123G4;0.869601!11751-123G5;0.712733!11840-124H4;0.907311!11752-123G6;0.377732!11753-123G7;0.656881!11754-123G8;0.911375!11755-123G9;0.474099!11756-123H1;0.605364!11833-124G6;0.741309!11760-123H5;0.252614!11836-124G9;0.981941!11758-123H3;0.687904!11835-124G8;0.859271!11762-123H7;0.6704!11838-124H2;0.754446!11757-123H2;0.44561!11759-123H4;0.785806!11761-123H6;0.622248!11842-124H6;0.764208!11837-124H1;0.546195!10568-108B1;0.298776!13230-141I8;0.0106164!13231-141I9;0.895333!10696-109G3;0.879214!10493-107B7;0.145481!10494-107B8;0.687436!10850-111F4;0.42!10851-111F5;0.162348!10852-111F6;0.692707!10853-111F7;0.7772!10854-111F8;0.596732!10855-111F9;0.878115!10856-111G1;0.0426148!10847-111F1;0.405808!10846-111E9;0.621034!10848-111F2;0.278636!10845-111E8;0.392977!10857-111G2;0.284548!10858-111G3;0.114017!10156-103A3;0.738826!11901-125F2;0.432037!11902-125F3;0.80713!11903-125F4;0.556647!10689-109F5;0.44363!10648-109A9;0.366975!10784-110H1;0.157917!10744-110C6;0.939242!10772-110F7;0.605392!10474-106I6;0.546306!10600-108E6;0.829811!10684-109E9;0.331958!12226-129F3;0.612062!12227-129F4;0.89825!10508-107D4;0.256673!10539-107G8;0.901197!10607-108F4;0.467626!10555-107I6;0.214617!10774-110F9;0.278224!10637-108I7;0.201961!10663-109C6;0.298839!10728-110A8;0.657549!10729-110A9;0.382202!10430-106D7;0.626594!10730-110B1;0.720024!10813-111B3;0.775545!10812-111B2;0.756437!10037-101F1;0.431206!10172-103C1;0.429699!10163-103B1;0.165149!10076-102A4;0.356263!10073-102A1;0.336652!10036-101E9;0.180777!10195-103E6;0.504656!10277-104E7;0.457396!10434-106E2;0.335553!10550-107I1;0.399377!10545-107H5;0.18703!10544-107H4;0.250875!10704-109H2;0.47392!10510-107D6;0.758066!10558-107I9;0.626204!10020-101D2;0.167232!10732-110B3;0.738962!10049-101G4;0.255737!10698-109G5;0.496511!10437-106E5;0.147794!10417-106C3;0.646446!10035-101E8;0.668898!10171-103B9;0.397469!10157-103A4;0.255124!10034-101E7;0.341535!10072-101I9;0.423802!10199-103F1;0.154028!10200-103F2;0.599689!10697-109G4;0.897352!10723-110A3;0.091092!10179-103C8;0.345259!10160-103A7;0.407837!10180-103C9;0.374186!10162-103A9;0.0702204!10021-101D3;0.0324763!10840-111E3;0.483167!10706-109H4;0.964623!10033-101E6;0.700505!10032-101E5;0.362855!10490-107B4;0.511894!10439-106E7;0.630963!10022-101D4;0.876385!10176-103C5;0.429033!10469-106I1;0.423512!10067-101I4;0.401972!10411-106B6;0.398973!10471-106I3;0.197959!10030-101E3;0.745586!10475-106I7;0.813501!10787-110H4;0.40632!10477-106I9;0.111854!10695-109G2;0.724923!11771-123I7;0.177613!11772-123I8;0.222318!11773-123I9;0.45716!10093-102C3;0.149689!10442-106F1;0.96197!10442-106F1;0.6041!10201-103F3;0.660068!10639-108I9;0.667371!11843-124H7;0.116006!11841-124H5;0.754108!10693-109F9;0.448579!10436-106E4;0.0479938!10483-107A6;0.295169!10282-104F3;0.207083!10023-101D5;0.643907!10066-101I3;0.712258!10065-101I2;0.731356!10800-110I8;0.748312!10610-108F7;0.41924!10841-111E4;0.706857!10541-107H1;0.57003!10842-111E5;0.441091!10562-108A4;0.389831!10024-101D6;0.682427!10064-101I1;0.82008!10609-108F6;0.932646!10048-101G3;0.887225!10781-110G7;0.722144!10181-103D1;0.597321!10159-103A6;0.335095!10056-101H2;0.176723!10737-110B8;0.856251!10025-101D7;0.517192!10044-101F8;0.376497!10424-106D1;0.610002!10463-106H4;0.504721!10616-108G4;0.961201!10486-107A9;0.546743!10062-101H8;0.58995!10202-103F4;0.25036!10158-103A5;0.582633!10441-106E9;0.37726!10031-101E4;0.325886!10063-101H9;0.532959!10063-101H9;0.35011!11763-123H8;0.886205!11765-123I1;0.668268!11768-123I4;0.621961!10807-111A6;0.806632!10790-110H7;0.0619788!10798-110I6;0.156895!10786-110H3;0.0166943!10591-108D6;0.159224!10593-108D8;0.740206!10590-108D5;0.508591!10026-101D8;0.422042!10096-102C6;0.596915!10168-103B6;0.798954!10154-103A1;0.254073!10209-103G2;0.418415!10061-101H7;0.739357!10027-101D9;0.785298!10043-101F7;0.208956!10783-110G9;0.187017!10028-101E1;0.928212!10060-101H6;0.772223!10203-103F5;0.812355!10059-101H5;0.925551!10047-101G2;0.901397!10029-101E2;0.573672!10058-101H4;0.525915!10418-106C4;0.919904!10492-107B6;0.626342!10694-109G1;0.693331!10797-110I5;0.475209!10057-101H3;0.721876!10100-102D1;0.680002!10055-101H1;0.436612!10204-103F6;0.931691!10191-103E2;0.395929!10563-108A5;0.639012
|name=motif11
|name=motif11
|tomtom_result=HAP3#MA0314.1;6;0.00412897;1.96539;1;8;CCAAGGAG;TCTGAACCAATCAGA;-!HAP5#MA0316.1;1;0.00437148;2.08083;1;8;CCAAGGAG;ACCAATCAGATCCCA;-!NFYA#MA0060.1;5;0.00902008;4.29356;1;8;CCAAGGAG;CTCAGCCAATCAGCGC;+!HAP4#MA0315.1;1;0.0100718;4.79419;1;8;CCAAGGAG;ACCAATCAGAGGCGA;+!SOX10#MA0442.1;0;0.0113453;5.40038;1;6;CCAAGGAG;ACAAAG;-!Dr#MA0188.1;0;0.0130675;6.22012;1;7;CCAAGGAG;CCAATTA;+!RME1#MA0370.1;1;0.0158161;7.52848;1;8;CCAAGGAG;TCCAAAGGAA;+!zen#MA0256.1;0;0.017171;8.17339;1;7;CCAAGGAG;CTAATGA;+!Sox17#MA0078.1;1;0.0189042;8.99842;1;8;CCAAGGAG;GACAATGAG;-!RUNX1#MA0002.2;3;0.0196156;9.33704;1;8;CCAAGGAG;AAACCACAGAC;-
}}
}}

Latest revision as of 14:46, 7 September 2012

Full Name: motif11

Motif matrix
POACGT
0103534500
0203534500
0335345000
0435345000
05121332043138677302
0600353450
0735345000
0895357065137085037

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
HAP3#MA0314.160.004128971.9653918CCAAGGAGTCTGAACCAATCAGA-
HAP5#MA0316.110.004371482.0808318CCAAGGAGACCAATCAGATCCCA-
NFYA#MA0060.150.009020084.2935618CCAAGGAGCTCAGCCAATCAGCGC+
HAP4#MA0315.110.01007184.7941918CCAAGGAGACCAATCAGAGGCGA+
SOX10#MA0442.100.01134535.4003816CCAAGGAGACAAAG-
Dr#MA0188.100.01306756.2201217CCAAGGAGCCAATTA+
RME1#MA0370.110.01581617.5284818CCAAGGAGTCCAAAGGAA+
zen#MA0256.100.0171718.1733917CCAAGGAGCTAATGA+
Sox17#MA0078.110.01890428.9984218CCAAGGAGGACAATGAG-
RUNX1#MA0002.230.01961569.3370418CCAAGGAGAAACCACAGAC-
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