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MacroAPE 1083:CNhs12323 bu f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;755.2843878507539;22.86758613280787;4014.519802569742;90.72906901244906!2;301.6389488265924;604.4356102027003;3905.6339285757504;71.69235796...")
 
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71!10789-110H6;0.419998!10828-111C9;0.19985!10788-110H5;0.094002!10792-110H9;0.210561!10765-110E9;0.369114!10829-111D1;0.249247!10830-111D2;0.291751!10831-111D3;0.431308!10832-111D4;0.223949!10833-111D5;0.118794!10764-110E8;0.236139!10770-110F5;0.276698!10399-106A3;0.0332237!10400-106A4;0.115216!10405-106A9;0.133288!10834-111D6;0.13726!10835-111D7;0.186244!10836-111D8;0.170747!10837-111D9;0.235016!10699-109G6;0.26995!10802-111A1;0.554677!10796-110I4;0.109863!10010-101C1;0.157076!10810-111A9;0.398781!10421-106C7;0.152794!10708-109H6;0.267909!12235-129G3;0.382061!12236-129G4;0.486007!12237-129G5;0.462522!10167-103B5;0.235062!10151-102I7;0.0505553!10428-106D5;0.0251618!10795-110I3;0.479904!10805-111A4;0.00231543!10052-101G7;0.459744!10189-103D9;0.0643705!10589-108D4;0.0860855!10425-106D2;0.471847!10427-106D4;0.583122!10702-109G9;0.14743!10432-106D9;0.623642!10496-107C1;0.179274!10718-109I7;0.325099!10011-101C2;0.370991!10053-101G8;0.109717!10686-109F2;0.955128!10084-102B3;0.446569!10012-101C3;0.0170599!10085-102B4;0.0231202!10482-107A5;0.0744199!10419-106C5;0.0204605!10080-102A8;0.186104!10760-110E4;0.543574!10709-109H7;0.11386!10710-109H8;0.124007!10703-109H1;0.22872!10719-109I8;0.885888!10642-109A3;0.548333!10177-103C6;0.43875!10164-103B2;0.0222586!10173-103C2;0.0443223!10166-103B4;0.046338!10083-102B2;0.0343833!10188-103D8;0.0208186!10552-107I3;0.0260357!10553-107I4;0.128539!10013-101C4;0.450195!10536-107G5;0.0438104!10618-108G6;0.470768!10423-106C9;0.0748242!10785-110H2;0.168284!12238-129G6;0.0970596!12239-129G7;0.990297!12240-129G8;0.278046!10416-106C2;0.988557!10801-110I9;0.268847!10766-110F1;0.178801!10824-111C5;0.201497!10825-111C6;0.160191!10826-111C7;0.168594!10454-106G4;0.19897!10409-106B4;0.205051!10638-108I8;0.117644!10636-108I6;0.0871482!10513-107D9;0.237738!10420-106C6;0.224851!10082-102B1;0.283213!10014-101C5;0.140513!10070-101I7;0.125346!10452-106G2;0.0720734!10453-106G3;0.295095!10449-106F8;0.333263!10042-101F6;0.391706!10069-101I6;0.0129255!10193-103E4;0.126656!10631-108I1;0.020964!10438-106E6;0.0530754!10488-107B2;0.363095!10196-103E7;0.825177!10071-101I8;0.206867!10071-101I8;0.107174!10041-101F5;0.155112!10451-106G1;0.0324614!10450-106F9;0.20927!10604-108F1;0.0972715!10605-108F2;0.269356!10606-108F3;0.150706!10603-108E9;0.23733!10497-107C2;0.428577!10448-106F7;0.211268!10643-109A4;0.393967!10426-106D3;0.0201588!10431-106D8;0.469745!10197-103E8;0.146345!10443-106F2;0.154708!10815-111B5;0.192266!10816-111B6;0.0942256!10817-111B7;0.151161!10015-101C6;0.0926624!10410-106B5;0.05642!10054-101G9;0.329785!10758-110E2;0.0222482!10711-109H9;0.619383!10040-101F4;0.309989!10470-106I2;0.0307779!10415-106C1;0.453429!10198-103E9;0.374269!10614-108G2;0.0626038!10612-108F9;0.286635!10549-107H9;0.394107!10615-108G3;0.13804!10487-107B1;0.129594!10433-106E1;0.279708!10688-109F4;0.44325!10444-106F3;0.928449!10444-106F3;0.694486!10485-107A8;0.59761!10413-106B8;0.442513!10175-103C4;0.485338!10161-103A8;0.0242603!12131-128D7;0.0207213!10624-108H3;0.452821!10712-109I1;0.290709!10205-103F7;0.245881!10206-103F8;0.129746!10207-103F9;0.354811!10050-101G5;0.382121!10051-101G6;0.76889!10016-101C7;0.512752!10046-101G1;0.710442!10778-110G4;0.438498!10633-108I3;0.693604!10818-111B8;0.136776!10819-111B9;0.117189!10820-111C1;0.12328!10484-107A7;0.129234!10808-111A7;0.196375!10169-103B7;0.166537!10153-102I9;0.0474109!13425-144D5;0.0220144!13433-144E4;0.12972!13437-144E8;0.25265!11904-125F5;0.142383!11905-125F6;0.362651!10039-101F3;0.96102!10791-110H8;0.0232275!10017-101C8;0.156573!10045-101F9;0.480622!10509-107D5;0.156915!10839-111E2;0.684601!10692-109F8;0.537529!10079-102A7;0.122754!10078-102A6;0.324483!10721-110A1;0.903256!10569-108B2;0.139574!10570-108B3;0.932571!10571-108B4;0.892203!10647-109A8;0.428959!10752-110D5;0.769246!10782-110G8;0.117535!10726-110A6;0.49502!10018-101C9;0.971303!10086-102B5;0.813653!10182-103D2;0.886275!10165-103B3;0.0168501!10499-107C4;0.0152574!10408-106B3;0.160245!10019-101D1;0.734273!10068-101I5;0.146566!10075-102A3;0.133561!10077-102A5;0.117351!10727-110A7;0.506334!10775-110G1;0.147248!10412-106B7;0.116365!12231-129F8;0.867176!12232-129F9;0.504587!12233-129G1;0.367509!12234-129G2;0.480291!10414-106B9;0.205011!10170-103B8;0.10267!10183-103D3;0.037441!10150-102I6;0.0380274!10174-103C3;0.0304098!10155-103A2;0.0187908!10038-101F2;0.0128469!10838-111E1;0.00771233!10759-110E3;0.239956!10514-107E1;0.243382!10465-106H6;0.0683489!10691-109F7;0.535757!10843-111E6;0.556604!10844-111E7;0.629122!11747-123G1;0.970849!11748-123G2;0.385588!11749-123G3;0.535404!11750-123G4;0.535173!11751-123G5;0.0965396!11840-124H4;0.0442929!11752-123G6;0.521276!11753-123G7;0.4364!11754-123G8;0.128329!11755-123G9;0.402717!11756-123H1;0.963077!11833-124G6;0.282031!11760-123H5;0.804277!11836-124G9;0.425647!11758-123H3;0.357553!11835-124G8;0.514107!11762-123H7;0.237528!11838-124H2;0.524504!11757-123H2;0.562353!11759-123H4;0.300195!11761-123H6;0.783935!11842-124H6;0.201053!11837-124H1;0.764063!10568-108B1;0.212316!13230-141I8;0.205694!13231-141I9;0.430221!10696-109G3;0.555996!10493-107B7;0.664117!10494-107B8;0.0851239!10850-111F4;0.866314!10851-111F5;0.225393!10852-111F6;0.542425!10853-111F7;0.416317!10854-111F8;0.309919!10855-111F9;0.816327!10856-111G1;0.778331!10847-111F1;0.607718!10846-111E9;0.346492!10848-111F2;0.596534!10845-111E8;0.207247!10857-111G2;0.0435453!10858-111G3;0.14216!10156-103A3;0.20661!11901-125F2;0.0269707!11902-125F3;0.336753!11903-125F4;0.120839!10689-109F5;0.081985!10648-109A9;0.154575!10784-110H1;0.0890659!10744-110C6;0.183674!10772-110F7;0.522402!10474-106I6;0.303335!10600-108E6;0.112791!10684-109E9;0.375809!12226-129F3;0.939397!12227-129F4;0.0487946!10508-107D4;0.200013!10539-107G8;0.527164!10607-108F4;0.472318!10555-107I6;0.196516!10774-110F9;0.971319!10637-108I7;0.289542!10663-109C6;0.478512!10728-110A8;0.591645!10729-110A9;0.190389!10430-106D7;0.657569!10730-110B1;0.400205!10813-111B3;0.791759!10812-111B2;0.0810551!10037-101F1;0.773446!10172-103C1;0.0245792!10163-103B1;0.0262163!10076-102A4;0.0219087!10073-102A1;0.0257147!10036-101E9;0.146772!10195-103E6;0.0167947!10277-104E7;0.0308058!10434-106E2;0.0278907!10550-107I1;0.0600916!10545-107H5;0.0614168!10544-107H4;0.508447!10704-109H2;0.437165!10510-107D6;0.879867!10558-107I9;0.706862!10020-101D2;0.881621!10732-110B3;0.0319482!10049-101G4;0.50436!10698-109G5;0.391089!10437-106E5;0.159695!10417-106C3;0.781862!10035-101E8;0.459169!10171-103B9;0.0262097!10157-103A4;0.0382456!10034-101E7;0.029134!10072-101I9;0.0259301!10199-103F1;0.138547!10200-103F2;0.3438!10697-109G4;0.0881985!10723-110A3;0.872777!10179-103C8;0.0324477!10160-103A7;0.0163601!10180-103C9;0.0423417!10162-103A9;0.0523355!10021-101D3;0.0292571!10840-111E3;0.824115!10706-109H4;0.107597!10033-101E6;0.792617!10032-101E5;0.0098866!10490-107B4;0.0201304!10439-106E7;0.0216308!10022-101D4;0.1244!10176-103C5;0.0781028!10469-106I1;0.0591777!10067-101I4;0.137432!10411-106B6;0.0310358!10471-106I3;0.536131!10030-101E3;0.351809!10475-106I7;0.0317063!10787-110H4;0.443268!10477-106I9;0.628938!10695-109G2;0.728561!11771-123I7;0.509599!11772-123I8;0.573115!11773-123I9;0.430393!10093-102C3;0.866034!10442-106F1;0.184797!10442-106F1;0.177521!10201-103F3;0.184369!10639-108I9;0.0401332!11843-124H7;0.24122!11841-124H5;0.0818198!10693-109F9;0.0914236!10436-106E4;0.0525507!10483-107A6;0.640122!10282-104F3;0.127738!10023-101D5;0.139539!10066-101I3;0.228508!10065-101I2;0.0520481!10800-110I8;0.048083!10610-108F7;0.320818!10841-111E4;0.953905!10541-107H1;0.165543!10842-111E5;0.0265582!10562-108A4;0.815765!10024-101D6;0.852988!10064-101I1;0.170793!10609-108F6;0.134967!10048-101G3;0.586155!10781-110G7;0.160577!10181-103D1;0.799884!10159-103A6;0.0119904!10056-101H2;0.0132995!10737-110B8;0.0169819!10025-101D7;0.761741!10044-101F8;0.480756!10424-106D1;0.245792!10463-106H4;0.10522!10616-108G4;0.327251!10486-107A9;0.239898!10062-101H8;0.622806!10202-103F4;0.219326!10158-103A5;0.0949947!10441-106E9;0.0215489!10031-101E4;0.136531!10063-101H9;0.0192078!10063-101H9;0.128653!11763-123H8;0.109895!11765-123I1;0.0869406!11768-123I4;0.193158!10807-111A6;0.680809!10790-110H7;0.192801!10798-110I6;0.384502!10786-110H3;0.872741!10591-108D6;0.351278!10593-108D8;0.666312!10590-108D5;0.997195!10026-101D8;0.440974!10096-102C6;0.270634!10168-103B6;0.936933!10154-103A1;0.0248692!10209-103G2;0.0201281!10061-101H7;0.0646788!10027-101D9;0.0279707!10043-101F7;0.333694!10783-110G9;0.22474!10028-101E1;0.760909!10060-101H6;0.691951!10203-103F5;0.286942!10059-101H5;0.0814447!10047-101G2;0.0654359!10029-101E2;0.116086!10058-101H4;0.0940387!10418-106C4;0.0679725!10492-107B6;0.320733!10694-109G1;0.178928!10797-110I5;0.444389!10057-101H3;0.179306!10100-102D1;0.144763!10055-101H1;0.0518745!10204-103F6;0.0463845!10191-103E2;0.288373!10563-108A5;0.173718
|name=CNhs12323_bu_f0
|name=CNhs12323_bu_f0
|tomtom_result=SP1#MA0079.2;-1;0.000138146;0.0657576;0.131482;10;GGAGGGAGGGGG;GGGGGCGGGG;-!Pax4#MA0068.1;0;0.00149412;0.711203;0.615925;12;GGAGGGAGGGGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!Trl#MA0205.1;-1;0.00210599;1.00245;0.615925;10;GGAGGGAGGGGG;GAGAGAGCAA;-!MZF1_5-13#MA0057.1;0;0.00258858;1.23216;0.615925;10;GGAGGGAGGGGG;GGAGGGGGAA;+!YGR067C#MA0425.1;2;0.00401354;1.91044;0.763984;12;GGAGGGAGGGGG;TGAAAAAGTGGGGT;-!btd#MA0443.1;0;0.00515214;2.45242;0.817265;10;GGAGGGAGGGGG;AGGGGGCGGA;+!UGA3#MA0410.1;1;0.0066446;3.16283;0.829435;7;GGAGGGAGGGGG;CGGCGGGA;+!Klf4#MA0039.2;0;0.00784328;3.7334;0.829435;10;GGAGGGAGGGGG;TAAAGGAAGG;+!SP1#MA0079.2;-1;0.00784328;3.7334;0.829435;10;GGAGGGAGGGGG;GGGGCGGGGT;+!EWSR1-FLI1#MA0149.1;5;0.00895976;4.26485;0.852753;12;GGAGGGAGGGGG;GGAAGGAAGGAAGGAAGG;+!abi4#MA0123.1;0;0.0107468;5.11547;0.929851;10;GGAGGGAGGGGG;GGGGGCACCG;-!PPARG::RXRA#MA0065.2;1;0.0130629;6.21795;0.984442;12;GGAGGGAGGGGG;GTAGGGCAAAGGTCA;+!IXR1#MA0323.1;2;0.0135984;6.47283;0.984442;12;GGAGGGAGGGGG;AAGCCGGAAGCGGGG;+!RGM1#MA0366.1;-6;0.0151932;7.23197;0.984442;5;GGAGGGAGGGGG;AGGGG;+!YML081W#MA0431.1;-3;0.0159922;7.6123;0.984442;9;GGAGGGAGGGGG;GTGCGGGGT;-!Klf4#MA0039.2;-2;0.0165494;7.87753;0.984442;10;GGAGGGAGGGGG;TGGGTGGGGC;+!MSN4#MA0342.1;-6;0.0199359;9.48949;0.999747;5;GGAGGGAGGGGG;AGGGG;+
}}
}}

Latest revision as of 14:47, 7 September 2012

Full Name: CNhs12323_bu_f0

Motif matrix
POACGT
1755.284387850753922.867586132807874014.51980256974290.72906901244906
2301.6389488265924604.43561020270033905.633928575750471.69235796071044
33398.8645641439175445.22057517757594901.7749534580985137.54075278616156
4886.48182824586214.0744801230444653893.76887415974689.07566303710058
5635.7912264003244125.17572685702574107.64000793682714.793884371572485
694.154661258712791751.43769912933023016.70336282132421.105122356393988
74429.41699036445152.06755036751826568.35594278293289333.5603620508458
877.2455079737354312.3695703593682024788.9605834432644.825183789384961
91717.506743246752291.625827626503023018.380042733730555.88823195876769
101467.437539942741108.051880305159123122.3969605940815185.51446472376918
111593.2558116114035112.594041703403723058.155732899442119.39525935150172
12804.2131342105909630.74600844878013354.64972922592793.79197368045347

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.2-10.0001381460.06575760.13148210GGAGGGAGGGGGGGGGGCGGGG-
Pax4#MA0068.100.001494120.7112030.61592512GGAGGGAGGGGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
Trl#MA0205.1-10.002105991.002450.61592510GGAGGGAGGGGGGAGAGAGCAA-
MZF1_5-13#MA0057.100.002588581.232160.61592510GGAGGGAGGGGGGGAGGGGGAA+
YGR067C#MA0425.120.004013541.910440.76398412GGAGGGAGGGGGTGAAAAAGTGGGGT-
btd#MA0443.100.005152142.452420.81726510GGAGGGAGGGGGAGGGGGCGGA+
UGA3#MA0410.110.00664463.162830.8294357GGAGGGAGGGGGCGGCGGGA+
Klf4#MA0039.200.007843283.73340.82943510GGAGGGAGGGGGTAAAGGAAGG+
SP1#MA0079.2-10.007843283.73340.82943510GGAGGGAGGGGGGGGGCGGGGT+
EWSR1-FLI1#MA0149.150.008959764.264850.85275312GGAGGGAGGGGGGGAAGGAAGGAAGGAAGG+
abi4#MA0123.100.01074685.115470.92985110GGAGGGAGGGGGGGGGGCACCG-
PPARG::RXRA#MA0065.210.01306296.217950.98444212GGAGGGAGGGGGGTAGGGCAAAGGTCA+
IXR1#MA0323.120.01359846.472830.98444212GGAGGGAGGGGGAAGCCGGAAGCGGGG+
RGM1#MA0366.1-60.01519327.231970.9844425GGAGGGAGGGGGAGGGG+
YML081W#MA0431.1-30.01599227.61230.9844429GGAGGGAGGGGGGTGCGGGGT-
Klf4#MA0039.2-20.01654947.877530.98444210GGAGGGAGGGGGTGGGTGGGGC+
MSN4#MA0342.1-60.01993599.489490.9997475GGAGGGAGGGGGAGGGG+
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