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MacroAPE 1083:8-GAAACAACCT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;178.562;201.058;878.75;147.63!2;1095.274;139.194;11.248;160.284!3;1006.696;170.126;189.81;39.368!4;1197.912;57.646;126.54;23.902!5;177.156;1...")
 
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0717-109I6;0.025869!10455-106G5;0.0710082!10534-107G3;0.9293!10429-106D6;0.791758!10464-106H5;0.590129!10827-111C8;0.0991113!10789-110H6;0.946595!10828-111C9;0.710645!10788-110H5;0.297629!10792-110H9;0.613527!10765-110E9;0.756019!10829-111D1;0.31387!10830-111D2;0.787545!10831-111D3;0.437712!10832-111D4;0.930177!10833-111D5;0.430956!10764-110E8;0.960862!10770-110F5;0.803961!10399-106A3;0.182933!10400-106A4;0.963124!10405-106A9;0.983583!10834-111D6;0.897996!10835-111D7;0.899407!10836-111D8;0.164109!10837-111D9;0.349914!10699-109G6;0.623692!10802-111A1;0.887447!10796-110I4;0.843099!10010-101C1;0.355591!10810-111A9;0.176697!10421-106C7;0.42967!10708-109H6;0.712991!12235-129G3;0.466763!12236-129G4;0.197766!12237-129G5;0.0960571!10167-103B5;0.0232845!10151-102I7;0.232046!10428-106D5;0.209331!10795-110I3;0.984866!10805-111A4;0.421538!10052-101G7;0.712058!10189-103D9;0.893518!10589-108D4;0.618828!10425-106D2;0.543793!10427-106D4;0.401424!10702-109G9;0.335984!10432-106D9;0.319795!10496-107C1;0.39154!10718-109I7;0.00146541!10011-101C2;0.958559!10053-101G8;0.915719!10686-109F2;0.138127!10084-102B3;0.303461!10012-101C3;0.455118!10085-102B4;0.150215!10482-107A5;0.871387!10419-106C5;0.0244645!10080-102A8;0.343295!10760-110E4;0.851363!10709-109H7;0.571741!10710-109H8;0.654548!10703-109H1;0.186968!10719-109I8;0.071417!10642-109A3;0.634972!10177-103C6;0.0787762!10164-103B2;0.314138!10173-103C2;0.201706!10166-103B4;0.405377!10083-102B2;0.444427!10188-103D8;0.654505!10552-107I3;0.209726!10553-107I4;0.0532377!10013-101C4;0.410035!10536-107G5;0.585439!10618-108G6;0.352594!10423-106C9;0.086717!10785-110H2;0.362433!12238-129G6;0.0152585!12239-129G7;0.384462!12240-129G8;0.538871!10416-106C2;0.468808!10801-110I9;0.375009!10766-110F1;0.147189!10824-111C5;0.798641!10825-111C6;0.848893!10826-111C7;0.974114!10454-106G4;0.882423!10409-106B4;0.739883!10638-108I8;0.39666!10636-108I6;0.173141!10513-107D9;0.0654247!10420-106C6;0.00172935!10082-102B1;0.742425!10014-101C5;0.421007!10070-101I7;0.988806!10452-106G2;0.524389!10453-106G3;0.572484!10449-106F8;0.567554!10042-101F6;0.567066!10069-101I6;0.311321!10193-103E4;0.644606!10631-108I1;0.273609!10438-106E6;0.511884!10488-107B2;0.351162!10196-103E7;0.0563191!10071-101I8;0.684347!10071-101I8;0.156212!10041-101F5;0.888389!10451-106G1;0.30938!10450-106F9;0.276843!10604-108F1;0.0980026!10605-108F2;0.300833!10606-108F3;0.285516!10603-108E9;0.313658!10497-107C2;0.348944!10448-106F7;0.711698!10643-109A4;0.200171!10426-106D3;0.139082!10431-106D8;0.271387!10197-103E8;0.490018!10443-106F2;0.784416!10815-111B5;0.985352!10816-111B6;0.120142!10817-111B7;0.132185!10015-101C6;0.0932954!10410-106B5;0.526723!10054-101G9;0.0749653!10758-110E2;0.519986!10711-109H9;0.299909!10040-101F4;0.180145!10470-106I2;0.232577!10415-106C1;0.230291!10198-103E9;0.982394!10614-108G2;0.922728!10612-108F9;0.572511!10549-107H9;0.296493!10615-108G3;0.368199!10487-107B1;0.694479!10433-106E1;0.890358!10688-109F4;0.882694!10444-106F3;0.120976!10444-106F3;0.294231!10485-107A8;0.489733!10413-106B8;0.00353757!10175-103C4;0.0132506!10161-103A8;0.364622!12131-128D7;0.309035!10624-108H3;0.0696142!10712-109I1;0.0549455!10205-103F7;0.731992!10206-103F8;0.139402!10207-103F9;0.187116!10050-101G5;0.197361!10051-101G6;0.0299873!10016-101C7;0.0379548!10046-101G1;0.0245855!10778-110G4;0.12118!10633-108I3;0.0809454!10818-111B8;0.0333058!10819-111B9;0.105392!10820-111C1;0.156405!10484-107A7;0.149283!10808-111A7;0.341096!10169-103B7;0.586769!10153-102I9;0.221211!13425-144D5;0.257608!13433-144E4;0.14921!13437-144E8;0.367224!11904-125F5;0.264914!11905-125F6;0.067074!10039-101F3;0.0354509!10791-110H8;0.254206!10017-101C8;0.613327!10045-101F9;0.682468!10509-107D5;0.413145!10839-111E2;0.957493!10692-109F8;0.256663!10079-102A7;0.00632416!10078-102A6;0.0416786!10721-110A1;0.103598!10569-108B2;0.0615296!10570-108B3;0.772744!10571-108B4;0.202496!10647-109A8;0.956402!10752-110D5;0.199562!10782-110G8;0.467752!10726-110A6;0.0149298!10018-101C9;0.563813!10086-102B5;0.622557!10182-103D2;0.137376!10165-103B3;0.539598!10499-107C4;0.403059!10408-106B3;0.17369!10019-101D1;0.996421!10068-101I5;0.122596!10075-102A3;0.0730667!10077-102A5;0.107318!10727-110A7;0.376378!10775-110G1;0.124083!10412-106B7;0.829289!12231-129F8;0.918043!12232-129F9;0.25277!12233-129G1;0.189493!12234-129G2;0.270801!10414-106B9;0.153913!10170-103B8;0.648559!10183-103D3;0.311428!10150-102I6;0.241099!10174-103C3;0.232918!10155-103A2;0.362394!10038-101F2;0.320577!10838-111E1;0.3527!10759-110E3;0.0797491!10514-107E1;0.906268!10465-106H6;0.448783!10691-109F7;0.53153!10843-111E6;0.908462!10844-111E7;0.155074!11747-123G1;0.489725!11748-123G2;0.18625!11749-123G3;0.0558452!11750-123G4;0.602122!11751-123G5;0.963968!11840-124H4;0.738792!11752-123G6;0.582597!11753-123G7;0.74367!11754-123G8;0.470206!11755-123G9;0.907029!11756-123H1;0.722248!11833-124G6;0.796143!11760-123H5;0.402917!11836-124G9;0.906632!11758-123H3;0.673409!11835-124G8;0.465153!11762-123H7;0.721256!11838-124H2;0.213137!11757-123H2;0.16975!11759-123H4;0.486889!11761-123H6;0.789151!11842-124H6;0.824439!11837-124H1;0.939141!10568-108B1;0.641843!13230-141I8;0.43552!13231-141I9;0.0479158!10696-109G3;0.0649517!10493-107B7;0.128952!10494-107B8;0.0219713!10850-111F4;0.00860495!10851-111F5;0.0288703!10852-111F6;0.00247091!10853-111F7;0.00301243!10854-111F8;0.166198!10855-111F9;0.317306!10856-111G1;0.114589!10847-111F1;0.000670402!10846-111E9;0.229159!10848-111F2;0.0408956!10845-111E8;0.0640966!10857-111G2;0.108924!10858-111G3;0.0647345!10156-103A3;0.0561237!11901-125F2;0.199729!11902-125F3;0.891194!11903-125F4;0.636971!10689-109F5;0.821739!10648-109A9;0.499049!10784-110H1;0.0558931!10744-110C6;0.111529!10772-110F7;0.182586!10474-106I6;0.698213!10600-108E6;0.389514!10684-109E9;0.579508!12226-129F3;0.421016!12227-129F4;0.101997!10508-107D4;0.995011!10539-107G8;0.0719015!10607-108F4;0.445974!10555-107I6;0.187434!10774-110F9;0.103452!10637-108I7;0.142891!10663-109C6;0.263607!10728-110A8;0.580856!10729-110A9;0.619523!10430-106D7;0.0172493!10730-110B1;0.504806!10813-111B3;0.873889!10812-111B2;0.13105!10037-101F1;0.527909!10172-103C1;0.198911!10163-103B1;0.306369!10076-102A4;0.252484!10073-102A1;0.23235!10036-101E9;0.915652!10195-103E6;0.230848!10277-104E7;0.27685!10434-106E2;0.991731!10550-107I1;0.213208!10545-107H5;0.124021!10544-107H4;0.366872!10704-109H2;0.455622!10510-107D6;0.290594!10558-107I9;0.0507962!10020-101D2;0.0835489!10732-110B3;0.500313!10049-101G4;0.424895!10698-109G5;0.426438!10437-106E5;0.393659!10417-106C3;0.588335!10035-101E8;0.598387!10171-103B9;0.249597!10157-103A4;0.239377!10034-101E7;0.230749!10072-101I9;0.246156!10199-103F1;0.71315!10200-103F2;0.918782!10697-109G4;0.49067!10723-110A3;0.0327847!10179-103C8;0.411009!10160-103A7;0.339011!10180-103C9;0.333302!10162-103A9;0.300425!10021-101D3;0.246998!10840-111E3;0.955447!10706-109H4;0.903779!10033-101E6;0.843331!10032-101E5;0.43286!10490-107B4;0.214714!10439-106E7;0.255475!10022-101D4;0.871482!10176-103C5;0.65009!10469-106I1;0.340863!10067-101I4;0.0782095!10411-106B6;0.250139!10471-106I3;0.0498163!10030-101E3;0.305188!10475-106I7;0.531247!10787-110H4;0.456552!10477-106I9;0.156365!10695-109G2;0.631589!11771-123I7;0.658652!11772-123I8;0.289766!11773-123I9;0.54316!10093-102C3;0.963939!10442-106F1;0.922185!10442-106F1;0.766419!10201-103F3;0.57843!10639-108I9;0.550289!11843-124H7;0.78637!11841-124H5;0.364736!10693-109F9;0.425891!10436-106E4;0.0076976!10483-107A6;0.390277!10282-104F3;0.292328!10023-101D5;0.815107!10066-101I3;0.281751!10065-101I2;0.461389!10800-110I8;0.892627!10610-108F7;0.469515!10841-111E4;0.27558!10541-107H1;0.329938!10842-111E5;0.810208!10562-108A4;0.457196!10024-101D6;0.973886!10064-101I1;0.9301!10609-108F6;0.0135615!10048-101G3;0.948827!10781-110G7;0.623195!10181-103D1;0.804444!10159-103A6;0.516029!10056-101H2;0.301197!10737-110B8;0.939198!10025-101D7;0.0713073!10044-101F8;0.0474459!10424-106D1;0.646944!10463-106H4;0.987698!10616-108G4;0.0381091!10486-107A9;0.665578!10062-101H8;0.829197!10202-103F4;0.0453876!10158-103A5;0.684784!10441-106E9;0.513964!10031-101E4;0.335087!10063-101H9;0.246717!10063-101H9;0.963269!11763-123H8;0.3729!11765-123I1;0.243992!11768-123I4;0.332674!10807-111A6;0.0959168!10790-110H7;0.731532!10798-110I6;0.371051!10786-110H3;0.525587!10591-108D6;0.700609!10593-108D8;0.661862!10590-108D5;0.695728!10026-101D8;0.957489!10096-102C6;0.0313106!10168-103B6;0.342541!10154-103A1;0.481902!10209-103G2;0.260578!10061-101H7;0.11908!10027-101D9;0.882966!10043-101F7;0.08552!10783-110G9;0.129889!10028-101E1;0.137607!10060-101H6;0.952491!10203-103F5;0.943379!10059-101H5;0.134793!10047-101G2;0.205896!10029-101E2;0.179432!10058-101H4;0.129519!10418-106C4;0.922628!10492-107B6;0.918502!10694-109G1;0.440747!10797-110I5;0.0489472!10057-101H3;0.012667!10100-102D1;0.802873!10055-101H1;0.580717!10204-103F6;0.842841!10191-103E2;0.837755!10563-108A5;0.392187
|name=8-GAAACAACCT,CNhs11998,BestGuess:FOXO1_si_HM09(0.696515238548895),T:1406.0(37.52%),B:11559.5(26.69%),P:1e-46
|name=8-GAAACAACCT,CNhs11998,BestGuess:FOXO1_si_HM09(0.696515238548895),T:1406.0(37.52%),B:11559.5(26.69%),P:1e-46
|tomtom_result=STE12#MA0393.1;1;0.00211516;1.00682;1;6;GAAACAACCT;TGAAACA;+!En1#MA0027.1;1;0.00391304;1.86261;1;10;GAAACAACCT;GAACACTACTT;-!Su(H)#MA0085.1;6;0.0044395;2.1132;1;10;GAAACAACCT;CTGTGGGAAACGAGAT;+!dl_1#MA0022.1;2;0.0057706;2.7468;1;10;GAAACAACCT;CGGAAAAACCCC;-!mirr#MA0233.1;-1;0.00643281;3.06202;1;5;GAAACAACCT;AAACA;+!FOXI1#MA0042.1;3;0.00935347;4.45225;1;9;GAAACAACCT;AAACAAACATCC;-!ara#MA0210.1;-1;0.0122318;5.82235;1;5;GAAACAACCT;TAACA;+!HCM1#MA0317.1;1;0.0128466;6.11498;1;7;GAAACAACCT;ATAAACAA;+!REL#MA0101.1;1;0.0174923;8.32635;1;9;GAAACAACCT;GGAAATCCCC;-
}}
}}

Latest revision as of 14:50, 7 September 2012

Full Name: 8-GAAACAACCT,CNhs11998,BestGuess:FOXO1_si_HM09(0.696515238548895),T:1406.0(37.52%),B:11559.5(26.69%),P:1e-46

Motif matrix
POACGT
1178.562201.058878.75147.63
21095.274139.19411.248160.284
31006.696170.126189.8139.368
41197.91257.646126.5423.902
5177.1561037.628164.50226.714
6852.036179.968168.72205.276
7885.78240.426178.562101.232
8213.712919.524203.8768.894
980.1421057.312251.67416.872
10195.4341.406272.764936.396

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
STE12#MA0393.110.002115161.0068216GAAACAACCTTGAAACA+
En1#MA0027.110.003913041.86261110GAAACAACCTGAACACTACTT-
Su(H)#MA0085.160.00443952.1132110GAAACAACCTCTGTGGGAAACGAGAT+
dl_1#MA0022.120.00577062.7468110GAAACAACCTCGGAAAAACCCC-
mirr#MA0233.1-10.006432813.0620215GAAACAACCTAAACA+
FOXI1#MA0042.130.009353474.4522519GAAACAACCTAAACAAACATCC-
ara#MA0210.1-10.01223185.8223515GAAACAACCTTAACA+
HCM1#MA0317.110.01284666.1149817GAAACAACCTATAAACAA+
REL#MA0101.110.01749238.3263519GAAACAACCTGGAAATCCCC-
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