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MacroAPE 1083:Motif424: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;9281;25225;8150;0!02;0;0;0;42656!03;0;0;0;42656!04;0;42656;0;0!05;0;42656;0;0!06;0;0;0;42656!07;0;0;0;42656 |macroape_1083_sample_pvalues=...")
 
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05!10534-107G3;0.943389!10429-106D6;0.833791!10464-106H5;0.586301!10827-111C8;0.886019!10789-110H6;0.307456!10828-111C9;0.0545846!10788-110H5;0.292161!10792-110H9;0.311063!10765-110E9;0.38187!10829-111D1;0.552907!10830-111D2;0.247192!10831-111D3;0.601051!10832-111D4;0.168096!10833-111D5;0.650573!10764-110E8;0.594061!10770-110F5;0.248751!10399-106A3;0.125555!10400-106A4;0.215871!10405-106A9;0.299384!10834-111D6;0.24545!10835-111D7;0.264718!10836-111D8;0.444453!10837-111D9;0.813977!10699-109G6;0.832576!10802-111A1;0.562104!10796-110I4;0.208177!10010-101C1;0.414823!10810-111A9;0.0639911!10421-106C7;0.159397!10708-109H6;0.752119!12235-129G3;0.388813!12236-129G4;0.608427!12237-129G5;0.779401!10167-103B5;0.704101!10151-102I7;0.172682!10428-106D5;0.209852!10795-110I3;0.299952!10805-111A4;0.756659!10052-101G7;0.00527882!10189-103D9;0.208044!10589-108D4;0.0291831!10425-106D2;0.157492!10427-106D4;0.000488566!10702-109G9;0.533725!10432-106D9;0.715344!10496-107C1;0.695614!10718-109I7;0.967856!10011-101C2;0.867043!10053-101G8;0.179334!10686-109F2;0.308558!10084-102B3;0.022588!10012-101C3;0.186625!10085-102B4;0.237278!10482-107A5;0.173098!10419-106C5;0.0489033!10080-102A8;0.0861131!10760-110E4;0.0621195!10709-109H7;0.859458!10710-109H8;0.351328!10703-109H1;0.454712!10719-109I8;0.0578312!10642-109A3;0.0966513!10177-103C6;0.0522252!10164-103B2;0.0685024!10173-103C2;0.12197!10166-103B4;0.0381322!10083-102B2;0.0465457!10188-103D8;0.050322!10552-107I3;0.191649!10553-107I4;0.159524!10013-101C4;0.924322!10536-107G5;0.0856995!10618-108G6;0.0164689!10423-106C9;0.481118!10785-110H2;0.587347!12238-129G6;0.924411!12239-129G7;0.576343!12240-129G8;0.572491!10416-106C2;0.571353!10801-110I9;0.605295!10766-110F1;0.80841!10824-111C5;0.529979!10825-111C6;0.539343!10826-111C7;0.614467!10454-106G4;0.683092!10409-106B4;0.536159!10638-108I8;0.975041!10636-108I6;0.313595!10513-107D9;0.271223!10420-106C6;0.828073!10082-102B1;0.0226276!10014-101C5;0.0106526!10070-101I7;0.0478554!10452-106G2;0.0229645!10453-106G3;0.147716!10449-106F8;0.34038!10042-101F6;0.435007!10069-101I6;0.157034!10193-103E4;0.649938!10631-108I1;0.0736291!10438-106E6;0.753105!10488-107B2;0.274924!10196-103E7;0.28722!10071-101I8;0.26989!10071-101I8;0.369646!10041-101F5;0.103435!10451-106G1;0.211998!10450-106F9;0.0101103!10604-108F1;0.0408928!10605-108F2;0.726171!10606-108F3;0.146262!10603-108E9;0.795808!10497-107C2;0.649134!10448-106F7;0.243641!10643-109A4;0.0330366!10426-106D3;0.611963!10431-106D8;0.576426!10197-103E8;0.581978!10443-106F2;0.0631348!10815-111B5;0.172056!10816-111B6;0.0659091!10817-111B7;0.0785662!10015-101C6;0.0802381!10410-106B5;0.0747238!10054-101G9;0.088757!10758-110E2;0.850201!10711-109H9;0.213695!10040-101F4;0.880641!10470-106I2;0.156773!10415-106C1;0.558224!10198-103E9;0.941331!10614-108G2;0.113634!10612-108F9;0.43197!10549-107H9;0.207686!10615-108G3;0.048358!10487-107B1;0.0368879!10433-106E1;0.411981!10688-109F4;0.552948!10444-106F3;0.589!10444-106F3;0.166741!10485-107A8;0.177437!10413-106B8;0.224859!10175-103C4;0.176662!10161-103A8;0.0835321!12131-128D7;0.298611!10624-108H3;0.931492!10712-109I1;0.0170158!10205-103F7;0.634522!10206-103F8;0.624443!10207-103F9;0.768828!10050-101G5;0.389064!10051-101G6;0.907855!10016-101C7;0.559944!10046-101G1;0.939138!10778-110G4;0.7217!10633-108I3;0.393001!10818-111B8;0.252291!10819-111B9;0.00971833!10820-111C1;0.0115882!10484-107A7;0.00853134!10808-111A7;0.0103599!10169-103B7;0.668879!10153-102I9;0.200744!13425-144D5;0.210516!13433-144E4;0.344092!13437-144E8;0.228756!11904-125F5;0.339173!11905-125F6;0.00229192!10039-101F3;0.024!10791-110H8;0.177147!10017-101C8;0.349199!10045-101F9;0.148207!10509-107D5;0.744271!10839-111E2;0.327655!10692-109F8;0.0488525!10079-102A7;0.348173!10078-102A6;0.465472!10721-110A1;0.70505!10569-108B2;0.322394!10570-108B3;0.93933!10571-108B4;0.777215!10647-109A8;0.861175!10752-110D5;0.000676842!10782-110G8;0.540356!10726-110A6;0.000827659!10018-101C9;0.228397!10086-102B5;0.995132!10182-103D2;0.846055!10165-103B3;0.13626!10499-107C4;0.200278!10408-106B3;0.609489!10019-101D1;0.775197!10068-101I5;0.0945515!10075-102A3;0.362936!10077-102A5;0.0719346!10727-110A7;0.0199962!10775-110G1;0.766809!10412-106B7;0.293624!12231-129F8;0.191775!12232-129F9;0.608686!12233-129G1;0.84133!12234-129G2;0.743424!10414-106B9;0.354948!10170-103B8;0.0153249!10183-103D3;0.179069!10150-102I6;0.148402!10174-103C3;0.241738!10155-103A2;0.167421!10038-101F2;0.192148!10838-111E1;0.284934!10759-110E3;0.0225601!10514-107E1;0.337277!10465-106H6;0.291225!10691-109F7;0.789984!10843-111E6;0.202275!10844-111E7;0.0642214!11747-123G1;0.0778811!11748-123G2;0.873317!11749-123G3;0.832743!11750-123G4;0.745805!11751-123G5;0.421473!11840-124H4;0.55007!11752-123G6;0.971274!11753-123G7;0.88595!11754-123G8;0.828157!11755-123G9;0.976632!11756-123H1;0.405111!11833-124G6;0.317881!11760-123H5;0.506628!11836-124G9;0.574564!11758-123H3;0.638933!11835-124G8;0.919538!11762-123H7;0.534606!11838-124H2;0.554435!11757-123H2;0.45844!11759-123H4;0.790312!11761-123H6;0.354761!11842-124H6;0.873094!11837-124H1;0.697201!10568-108B1;0.625495!13230-141I8;0.954997!13231-141I9;0.788056!10696-109G3;0.854208!10493-107B7;0.186259!10494-107B8;0.0193243!10850-111F4;0.0987867!10851-111F5;0.12676!10852-111F6;0.04976!10853-111F7;0.0789599!10854-111F8;0.140785!10855-111F9;0.0555565!10856-111G1;0.429737!10847-111F1;0.0411289!10846-111E9;0.347334!10848-111F2;0.487669!10845-111E8;0.492469!10857-111G2;0.109148!10858-111G3;0.218071!10156-103A3;0.343382!11901-125F2;0.240424!11902-125F3;0.121151!11903-125F4;0.23814!10689-109F5;0.150089!10648-109A9;0.533535!10784-110H1;0.166553!10744-110C6;0.614125!10772-110F7;0.571371!10474-106I6;0.532811!10600-108E6;0.814731!10684-109E9;0.00310136!12226-129F3;0.471346!12227-129F4;0.998969!10508-107D4;0.179085!10539-107G8;0.024698!10607-108F4;0.0441225!10555-107I6;0.189732!10774-110F9;0.111612!10637-108I7;0.0673956!10663-109C6;0.0297387!10728-110A8;0.0214065!10729-110A9;0.000835791!10430-106D7;0.49706!10730-110B1;0.745521!10813-111B3;0.173047!10812-111B2;0.179744!10037-101F1;0.75986!10172-103C1;0.139581!10163-103B1;0.18317!10076-102A4;0.225966!10073-102A1;0.166628!10036-101E9;0.0856807!10195-103E6;0.196618!10277-104E7;0.144691!10434-106E2;0.0461256!10550-107I1;0.123811!10545-107H5;0.136106!10544-107H4;0.0810894!10704-109H2;0.0262466!10510-107D6;0.147302!10558-107I9;0.106876!10020-101D2;0.432468!10732-110B3;0.623065!10049-101G4;0.0251876!10698-109G5;0.284449!10437-106E5;0.972844!10417-106C3;0.789114!10035-101E8;0.582284!10171-103B9;0.172446!10157-103A4;0.166168!10034-101E7;0.240159!10072-101I9;0.206069!10199-103F1;0.0865827!10200-103F2;0.0464586!10697-109G4;0.154902!10723-110A3;0.300932!10179-103C8;0.771458!10160-103A7;0.0222908!10180-103C9;0.0417228!10162-103A9;0.0635159!10021-101D3;0.155771!10840-111E3;0.0385524!10706-109H4;0.315254!10033-101E6;0.178223!10032-101E5;0.122466!10490-107B4;0.225998!10439-106E7;0.164749!10022-101D4;0.664126!10176-103C5;0.142588!10469-106I1;0.0929402!10067-101I4;0.736878!10411-106B6;0.750417!10471-106I3;0.053985!10030-101E3;0.454687!10475-106I7;0.477886!10787-110H4;0.0439766!10477-106I9;0.0442832!10695-109G2;0.0293506!11771-123I7;0.26487!11772-123I8;0.827454!11773-123I9;0.877689!10093-102C3;0.791494!10442-106F1;0.0100301!10442-106F1;0.239106!10201-103F3;0.17115!10639-108I9;0.650204!11843-124H7;0.655143!11841-124H5;0.623762!10693-109F9;0.539958!10436-106E4;0.105493!10483-107A6;0.70113!10282-104F3;0.729244!10023-101D5;0.9895!10066-101I3;0.413066!10065-101I2;0.640415!10800-110I8;0.959173!10610-108F7;0.13802!10841-111E4;0.0301887!10541-107H1;0.00863123!10842-111E5;0.165359!10562-108A4;0.0345623!10024-101D6;0.0269608!10064-101I1;0.0914012!10609-108F6;0.0344154!10048-101G3;0.761137!10781-110G7;0.453131!10181-103D1;0.0236283!10159-103A6;0.134236!10056-101H2;0.167042!10737-110B8;0.237184!10025-101D7;0.56468!10044-101F8;0.0376239!10424-106D1;0.043467!10463-106H4;0.482426!10616-108G4;0.18383!10486-107A9;0.368682!10062-101H8;0.382043!10202-103F4;0.558512!10158-103A5;0.0234999!10441-106E9;0.233353!10031-101E4;0.000697583!10063-101H9;0.217653!10063-101H9;0.0958137!11763-123H8;0.380151!11765-123I1;0.910383!11768-123I4;0.90109!10807-111A6;0.52021!10790-110H7;0.121963!10798-110I6;0.152513!10786-110H3;0.385843!10591-108D6;0.83472!10593-108D8;0.663485!10590-108D5;0.851604!10026-101D8;0.480146!10096-102C6;0.785745!10168-103B6;0.182238!10154-103A1;0.0555826!10209-103G2;0.120878!10061-101H7;0.0900075!10027-101D9;0.753175!10043-101F7;0.25627!10783-110G9;0.172797!10028-101E1;0.502856!10060-101H6;0.415954!10203-103F5;0.778503!10059-101H5;0.0924043!10047-101G2;0.257597!10029-101E2;0.00235578!10058-101H4;0.0282178!10418-106C4;0.761503!10492-107B6;0.950449!10694-109G1;0.191755!10797-110I5;0.0533271!10057-101H3;0.294493!10100-102D1;0.497249!10055-101H1;0.104502!10204-103F6;0.298788!10191-103E2;0.0681424!10563-108A5;0.0543506
|name=motif424
|name=motif424
|tomtom_result=EWSR1-FLI1#MA0149.1;1;1.88261e-05;0.00896121;0.0178422;7;CTTCCTT;CCTTCCTTCCTTCCTTCC;-!ELF5#MA0136.1;2;0.000352245;0.167669;0.166918;7;CTTCCTT;TACTTCCTT;+!SPI1#MA0080.2;1;0.000655677;0.312102;0.207137;6;CTTCCTT;ACTTCCT;-!RME1#MA0370.1;-1;0.00157148;0.748026;0.341166;6;CTTCCTT;TTCCTTTGGA;-!SPI1#MA0080.2;0;0.00188664;0.898039;0.341166;6;CTTCCTT;CTTCCG;-!Klf4#MA0039.1;1;0.00215987;1.0281;0.341166;7;CTTCCTT;CCTTCCTTTA;-!GCR2#MA0305.1;1;0.00298352;1.42016;0.403943;6;CTTCCTT;GCTTCCT;+!FEV#MA0156.1;1;0.0042465;2.02133;0.503072;7;CTTCCTT;ATTTCCTG;-!ETS1#MA0098.1;0;0.00498839;2.37447;0.525299;6;CTTCCTT;CTTCCG;+!HSF1#MA0319.1;1;0.00731799;3.48336;0.693554;7;CTTCCTT;TGTTCCAT;-!Stat3#MA0144.1;0;0.00909426;4.32887;0.718794;7;CTTCCTT;CTTCCTGGAA;-!Eip74EF#MA0026.1;0;0.00910117;4.33216;0.718794;7;CTTCCTT;CTTCCGG;-!AZF1#MA0277.1;0;0.0110661;5.26745;0.762009;7;CTTCCTT;TTTCTTTTT;-!GCR1#MA0304.1;2;0.0119464;5.68651;0.762009;6;CTTCCTT;GGCTTCCA;-!SPIB#MA0081.1;-1;0.0120604;5.74077;0.762009;6;CTTCCTT;TTCCTCT;-!MOT3#MA0340.1;-1;0.0192062;9.14213;0.995524;6;CTTCCTT;TACCTT;-
}}
}}

Latest revision as of 14:52, 7 September 2012

Full Name: motif424

Motif matrix
POACGT
0192812522581500
0200042656
0300042656
0404265600
0504265600
0600042656
0700042656

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
EWSR1-FLI1#MA0149.111.88261e-050.008961210.01784227CTTCCTTCCTTCCTTCCTTCCTTCC-
ELF5#MA0136.120.0003522450.1676690.1669187CTTCCTTTACTTCCTT+
SPI1#MA0080.210.0006556770.3121020.2071376CTTCCTTACTTCCT-
RME1#MA0370.1-10.001571480.7480260.3411666CTTCCTTTTCCTTTGGA-
SPI1#MA0080.200.001886640.8980390.3411666CTTCCTTCTTCCG-
Klf4#MA0039.110.002159871.02810.3411667CTTCCTTCCTTCCTTTA-
GCR2#MA0305.110.002983521.420160.4039436CTTCCTTGCTTCCT+
FEV#MA0156.110.00424652.021330.5030727CTTCCTTATTTCCTG-
ETS1#MA0098.100.004988392.374470.5252996CTTCCTTCTTCCG+
HSF1#MA0319.110.007317993.483360.6935547CTTCCTTTGTTCCAT-
Stat3#MA0144.100.009094264.328870.7187947CTTCCTTCTTCCTGGAA-
Eip74EF#MA0026.100.009101174.332160.7187947CTTCCTTCTTCCGG-
AZF1#MA0277.100.01106615.267450.7620097CTTCCTTTTTCTTTTT-
GCR1#MA0304.120.01194645.686510.7620096CTTCCTTGGCTTCCA-
SPIB#MA0081.1-10.01206045.740770.7620096CTTCCTTTTCCTCT-
MOT3#MA0340.1-10.01920629.142130.9955246CTTCCTTTACCTT-
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