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MacroAPE 1083:CNhs12096 bl f2: Difference between revisions

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0-120H7;0.299185!11681-122H7;0.496096!11216-116B1;0.328864!12179-129A1;0.587841!12180-129A2;0.0285944!12181-129A3;0.0284693!12176-128I7;0.0452075!12177-128I8;0.0171606!12182-129A4;0.0101234!12183-129A5;0.0205579!12184-129A6;0.0152797!10809-111A8;0.0262243!10597-108E3;0.011585!10717-109I6;0.961203!10455-106G5;0.0115074!10534-107G3;0.000273038!10429-106D6;0.00481662!10464-106H5;0.00392887!10827-111C8;0.00922675!10789-110H6;0.000104478!10828-111C9;2.48863e-06!10788-110H5;3.39398e-05!10792-110H9;1.43746e-07!10765-110E9;0.000110158!10829-111D1;0.00796665!10830-111D2;0.0027006!10831-111D3;0.0106688!10832-111D4;0.000114164!10833-111D5;0.000147864!10764-110E8;0.00028137!10770-110F5;0.000172771!10399-106A3;0.000193116!10400-106A4;0.000151384!10405-106A9;0.000212774!10834-111D6;0.000152213!10835-111D7;0.0011206!10836-111D8;0.000356666!10837-111D9;0.0843925!10699-109G6;0.000935107!10802-111A1;0.00995631!10796-110I4;0.0251553!10010-101C1;0.0516806!10810-111A9;0.0136683!10421-106C7;0.0391424!10708-109H6;0.00118145!12235-129G3;0.272365!12236-129G4;0.471824!12237-129G5;0.839194!10167-103B5;0.423081!10151-102I7;5.91722e-06!10428-106D5;5.89667e-06!10795-110I3;0.138816!10805-111A4;0.00118868!10052-101G7;0.0353643!10189-103D9;0.000285601!10589-108D4;0.371239!10425-106D2;0.13979!10427-106D4;0.157224!10702-109G9;0.00157822!10432-106D9;0.00874725!10496-107C1;0.0777601!10718-109I7;0.0880274!10011-101C2;0.000393658!10053-101G8;0.00591078!10686-109F2;0.0323772!10084-102B3;0.0115214!10012-101C3;4.656e-06!10085-102B4;1.21811e-06!10482-107A5;0.000108492!10419-106C5;0.0966684!10080-102A8;0.0118112!10760-110E4;0.0384482!10709-109H7;0.11712!10710-109H8;0.292516!10703-109H1;0.0110619!10719-109I8;0.763875!10642-109A3;0.681427!10177-103C6;0.540528!10164-103B2;4.1591e-06!10173-103C2;6.31233e-06!10166-103B4;0.000157649!10083-102B2;3.76417e-05!10188-103D8;1.18595e-05!10552-107I3;7.81212e-07!10553-107I4;0.00988025!10013-101C4;0.255973!10536-107G5;0.0121618!10618-108G6;0.752016!10423-106C9;0.000399972!10785-110H2;0.000108527!12238-129G6;0.00243399!12239-129G7;0.50461!12240-129G8;0.741638!10416-106C2;0.267116!10801-110I9;0.000545943!10766-110F1;0.000256276!10824-111C5;0.00324358!10825-111C6;0.0114571!10826-111C7;0.023365!10454-106G4;0.0189852!10409-106B4;0.0179228!10638-108I8;0.000373614!10636-108I6;0.00989095!10513-107D9;0.00256632!10420-106C6;0.0177037!10082-102B1;0.0755055!10014-101C5;0.135301!10070-101I7;0.072804!10452-106G2;0.0551054!10453-106G3;0.0123335!10449-106F8;0.0106749!10042-101F6;0.0104382!10069-101I6;5.62681e-05!10193-103E4;0.00452317!10631-108I1;2.40991e-06!10438-106E6;0.00373122!10488-107B2;0.120186!10196-103E7;0.0301636!10071-101I8;0.00303904!10071-101I8;0.0332386!10041-101F5;0.000145193!10451-106G1;0.000946883!10450-106F9;0.00869522!10604-108F1;0.0414842!10605-108F2;0.482978!10606-108F3;0.185357!10603-108E9;0.676609!10497-107C2;0.526779!10448-106F7;0.0423402!10643-109A4;0.110211!10426-106D3;0.000729695!10431-106D8;0.0779222!10197-103E8;0.111904!10443-106F2;0.0216096!10815-111B5;0.427577!10816-111B6;0.0286916!10817-111B7;0.0629607!10015-101C6;0.0404142!10410-106B5;0.0496969!10054-101G9;0.0363666!10758-110E2;0.00089268!10711-109H9;0.727338!10040-101F4;0.0801497!10470-106I2;2.4049e-06!10415-106C1;0.00439349!10198-103E9;0.209401!10614-108G2;0.0255023!10612-108F9;0.591566!10549-107H9;0.010025!10615-108G3;0.0666232!10487-107B1;0.969974!10433-106E1;0.0104897!10688-109F4;0.939641!10444-106F3;0.311701!10444-106F3;0.338217!10485-107A8;0.337103!10413-106B8;0.404917!10175-103C4;0.504355!10161-103A8;7.9487e-07!12131-128D7;1.01432e-05!10624-108H3;0.118247!10712-109I1;0.228304!10205-103F7;0.00761018!10206-103F8;0.00017961!10207-103F9;5.53392e-05!10050-101G5;0.00107407!10051-101G6;0.208537!10016-101C7;0.00851863!10046-101G1;0.00391755!10778-110G4;0.00132932!10633-108I3;0.0182911!10818-111B8;0.111784!10819-111B9;0.0429271!10820-111C1;0.0392037!10484-107A7;0.0449525!10808-111A7;0.742374!10169-103B7;0.00780388!10153-102I9;1.09061e-06!13425-144D5;6.91292e-06!13433-144E4;0.399218!13437-144E8;0.465134!11904-125F5;0.294871!11905-125F6;0.00136873!10039-101F3;0.00834907!10791-110H8;2.5755e-06!10017-101C8;0.0486266!10045-101F9;0.227736!10509-107D5;0.0165974!10839-111E2;0.704287!10692-109F8;0.349154!10079-102A7;0.171661!10078-102A6;0.00642166!10721-110A1;0.0474559!10569-108B2;0.0577031!10570-108B3;0.252911!10571-108B4;0.554857!10647-109A8;0.119176!10752-110D5;0.586583!10782-110G8;4.19624e-05!10726-110A6;0.217681!10018-101C9;0.733471!10086-102B5;0.704678!10182-103D2;0.571653!10165-103B3;7.22032e-06!10499-107C4;1.51928e-05!10408-106B3;0.151887!10019-101D1;0.165395!10068-101I5;0.0977936!10075-102A3;0.0342349!10077-102A5;0.176616!10727-110A7;0.995658!10775-110G1;0.00210591!10412-106B7;0.000242424!12231-129F8;0.46171!12232-129F9;0.0429194!12233-129G1;0.0236751!12234-129G2;0.0863256!10414-106B9;0.351255!10170-103B8;0.482097!10183-103D3;7.78391e-08!10150-102I6;1.89715e-07!10174-103C3;6.34775e-07!10155-103A2;4.21517e-05!10038-101F2;2.01068e-05!10838-111E1;3.99628e-05!10759-110E3;0.901505!10514-107E1;0.670619!10465-106H6;0.0254833!10691-109F7;0.0268724!10843-111E6;0.583582!10844-111E7;0.437657!11747-123G1;0.61939!11748-123G2;0.721547!11749-123G3;0.465633!11750-123G4;0.791993!11751-123G5;0.0152687!11840-124H4;0.00868463!11752-123G6;0.0998113!11753-123G7;0.329642!11754-123G8;0.015882!11755-123G9;0.32366!11756-123H1;0.892438!11833-124G6;0.809543!11760-123H5;0.976222!11836-124G9;0.50719!11758-123H3;0.355471!11835-124G8;0.380852!11762-123H7;0.14015!11838-124H2;0.0591331!11757-123H2;0.124888!11759-123H4;0.160164!11761-123H6;0.601749!11842-124H6;0.209622!11837-124H1;0.438455!10568-108B1;0.061308!13230-141I8;0.973075!13231-141I9;0.106907!10696-109G3;0.0635954!10493-107B7;5.51639e-05!10494-107B8;0.27387!10850-111F4;0.957913!10851-111F5;0.316986!10852-111F6;0.233172!10853-111F7;0.370141!10854-111F8;0.0696531!10855-111F9;0.34547!10856-111G1;0.458036!10847-111F1;0.0699115!10846-111E9;0.980053!10848-111F2;0.125483!10845-111E8;0.608548!10857-111G2;0.207104!10858-111G3;0.0861929!10156-103A3;0.0403577!11901-125F2;5.21698e-07!11902-125F3;0.00196149!11903-125F4;0.00155408!10689-109F5;0.00110241!10648-109A9;0.182525!10784-110H1;0.0824722!10744-110C6;0.163363!10772-110F7;0.0207785!10474-106I6;0.00195095!10600-108E6;0.00267499!10684-109E9;0.389954!12226-129F3;0.956671!12227-129F4;0.156247!10508-107D4;0.0381465!10539-107G8;0.516558!10607-108F4;0.529011!10555-107I6;0.609528!10774-110F9;0.411251!10637-108I7;0.189439!10663-109C6;0.394629!10728-110A8;0.546424!10729-110A9;0.931176!10430-106D7;0.00184829!10730-110B1;0.00774682!10813-111B3;0.236138!10812-111B2;0.0186984!10037-101F1;0.253895!10172-103C1;2.59843e-06!10163-103B1;2.704e-07!10076-102A4;1.24954e-06!10073-102A1;9.74402e-07!10036-101E9;0.000608531!10195-103E6;1.16052e-06!10277-104E7;1.14889e-06!10434-106E2;0.000112506!10550-107I1;0.0544028!10545-107H5;0.0200229!10544-107H4;0.559202!10704-109H2;0.697609!10510-107D6;0.0419622!10558-107I9;0.68361!10020-101D2;0.622085!10732-110B3;0.00894264!10049-101G4;0.45851!10698-109G5;0.933018!10437-106E5;0.00462511!10417-106C3;0.583572!10035-101E8;0.0882945!10171-103B9;1.82469e-06!10157-103A4;4.33282e-07!10034-101E7;1.22408e-06!10072-101I9;1.49337e-06!10199-103F1;0.000512769!10200-103F2;0.499228!10697-109G4;0.0264304!10723-110A3;0.733321!10179-103C8;0.509669!10160-103A7;1.88401e-05!10180-103C9;1.12016e-05!10162-103A9;0.00508688!10021-101D3;0.000188678!10840-111E3;0.562203!10706-109H4;0.00149153!10033-101E6;0.103698!10032-101E5;1.60838e-05!10490-107B4;5.58473e-07!10439-106E7;0.0127682!10022-101D4;0.154749!10176-103C5;0.00431284!10469-106I1;3.61348e-06!10067-101I4;0.160105!10411-106B6;0.00217202!10471-106I3;0.406392!10030-101E3;0.0730464!10475-106I7;1.72295e-05!10787-110H4;0.312698!10477-106I9;0.219069!10695-109G2;0.535636!11771-123I7;0.00862326!11772-123I8;0.856126!11773-123I9;0.554569!10093-102C3;0.233691!10442-106F1;0.275234!10442-106F1;0.122538!10201-103F3;0.0774898!10639-108I9;0.000609869!11843-124H7;0.872797!11841-124H5;0.656811!10693-109F9;0.135141!10436-106E4;0.0168086!10483-107A6;0.0125175!10282-104F3;0.0532218!10023-101D5;0.102884!10066-101I3;0.0493527!10065-101I2;0.014365!10800-110I8;0.0236457!10610-108F7;0.406201!10841-111E4;0.624806!10541-107H1;0.0780146!10842-111E5;0.0925824!10562-108A4;0.652404!10024-101D6;0.77785!10064-101I1;0.175692!10609-108F6;0.155365!10048-101G3;0.0818876!10781-110G7;0.00159016!10181-103D1;0.605422!10159-103A6;1.01218e-05!10056-101H2;0.000183181!10737-110B8;2.01318e-05!10025-101D7;0.000627177!10044-101F8;0.714793!10424-106D1;0.171486!10463-106H4;0.000655149!10616-108G4;0.200047!10486-107A9;0.192585!10062-101H8;0.00649586!10202-103F4;0.0911061!10158-103A5;0.219652!10441-106E9;0.000680807!10031-101E4;0.903108!10063-101H9;2.12245e-06!10063-101H9;0.000234636!11763-123H8;0.0283007!11765-123I1;0.00818657!11768-123I4;0.013095!10807-111A6;0.0172605!10790-110H7;0.918035!10798-110I6;0.395349!10786-110H3;0.829571!10591-108D6;0.455826!10593-108D8;0.193806!10590-108D5;0.890069!10026-101D8;0.0141668!10096-102C6;0.32737!10168-103B6;0.73326!10154-103A1;3.13126e-06!10209-103G2;2.08854e-05!10061-101H7;0.134823!10027-101D9;0.0143179!10043-101F7;0.0749534!10783-110G9;0.508802!10028-101E1;0.390616!10060-101H6;0.120967!10203-103F5;0.0166199!10059-101H5;0.159557!10047-101G2;0.0399116!10029-101E2;0.53662!10058-101H4;0.201686!10418-106C4;0.0237179!10492-107B6;0.38114!10694-109G1;0.0125511!10797-110I5;0.0843177!10057-101H3;0.920631!10100-102D1;0.053963!10055-101H1;0.00439319!10204-103F6;0.00523242!10191-103E2;0.013093!10563-108A5;0.15969
|name=CNhs12096_bl_f2
|name=CNhs12096_bl_f2
|tomtom_result=Trl#MA0205.1;0;0.000908984;0.432676;0.865352;10;CAGGGAGCCCGG;GAGAGAGCAA;-!CTCF#MA0139.1;7;0.0024204;1.15211;1;12;CAGGGAGCCCGG;TGGCCACCAGGGGGCGCTA;+!ESR1#MA0112.2;4;0.00458925;2.18448;1;12;CAGGGAGCCCGG;AGGTCAGGGTGACCTGGGCC;-!IXR1#MA0323.1;3;0.00572986;2.72742;1;12;CAGGGAGCCCGG;AAGCCGGAAGCGGGG;+!INSM1#MA0155.1;3;0.00613093;2.91832;1;9;CAGGGAGCCCGG;TGTCAGGGGGCG;+!GCR2#MA0305.1;-1;0.00638621;3.03984;1;7;CAGGGAGCCCGG;AGGAAGC;-!ESR2#MA0258.1;6;0.0097743;4.65257;1;12;CAGGGAGCCCGG;CAAGGTCACGGTGACCTG;+!USV1#MA0413.1;8;0.0140984;6.71083;1;12;CAGGGAGCCCGG;CACAAATTCAGGGGGAATTT;-!Stat3#MA0144.1;3;0.0143816;6.84566;1;7;CAGGGAGCCCGG;TTCCAGGAAG;+!opa#MA0456.1;3;0.016923;8.05533;1;9;CAGGGAGCCCGG;CAGCGGGGGGTC;-!GABPA#MA0062.2;0;0.0181869;8.65694;1;11;CAGGGAGCCCGG;CCGGAAGTGGC;+!MZF1_1-4#MA0056.1;0;0.0188644;8.97945;1;6;CAGGGAGCCCGG;TGGGGA;+!Macho-1#MA0118.1;0;0.0190829;9.08347;1;9;CAGGGAGCCCGG;TGGGGGGTC;+!SPI1#MA0080.2;-1;0.0205515;9.78249;1;7;CAGGGAGCCCGG;AGGAAGT;+
}}
}}

Latest revision as of 14:55, 7 September 2012

Full Name: CNhs12096_bl_f2

Motif matrix
POACGT
12.3765712449069483174.2788213890675635.41860762805528436.93800490277519
2177.16690594077336.551758668252321455.520459754160139.772880801619193
322.9699921178850843.2669166839611012207.5000509815094515.275045381449193
456.539711700791523.2302566308943685152.1780968759370337.063939957182036
50.66039126183475020.4869177015602503247.864696201409880.0
6249.01200516480490.00.00.0
70.124146652693878150.12414665269387815248.639565206723230.12414665269387815
86.011470370367686145.0641902575030456.9289633964956641.00738114043857
936.10688218435036120.6533420144732486.713540917260665.538240048720689
1089.62118288356214120.5691646463124732.571059810846416.250597824083926
1153.736313945202469.191074125320002111.985807626331474.09880946795104
1229.54029193691984102.19375806384285104.5548008504043312.723154313637899

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.100.0009089840.4326760.86535210CAGGGAGCCCGGGAGAGAGCAA-
CTCF#MA0139.170.00242041.15211112CAGGGAGCCCGGTGGCCACCAGGGGGCGCTA+
ESR1#MA0112.240.004589252.18448112CAGGGAGCCCGGAGGTCAGGGTGACCTGGGCC-
IXR1#MA0323.130.005729862.72742112CAGGGAGCCCGGAAGCCGGAAGCGGGG+
INSM1#MA0155.130.006130932.9183219CAGGGAGCCCGGTGTCAGGGGGCG+
GCR2#MA0305.1-10.006386213.0398417CAGGGAGCCCGGAGGAAGC-
ESR2#MA0258.160.00977434.65257112CAGGGAGCCCGGCAAGGTCACGGTGACCTG+
USV1#MA0413.180.01409846.71083112CAGGGAGCCCGGCACAAATTCAGGGGGAATTT-
Stat3#MA0144.130.01438166.8456617CAGGGAGCCCGGTTCCAGGAAG+
opa#MA0456.130.0169238.0553319CAGGGAGCCCGGCAGCGGGGGGTC-
GABPA#MA0062.200.01818698.65694111CAGGGAGCCCGGCCGGAAGTGGC+
MZF1_1-4#MA0056.100.01886448.9794516CAGGGAGCCCGGTGGGGA+
Macho-1#MA0118.100.01908299.0834719CAGGGAGCCCGGTGGGGGGTC+
SPI1#MA0080.2-10.02055159.7824917CAGGGAGCCCGGAGGAAGT+
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