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MacroAPE 1083:CNhs11267 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;984.1892199821353;561.2684312367857;50.65873301642627;802.7179592107692!2;654.3093865142866;731.6553290850323;281.46571181226096;731.4039160...")
 
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789-110H6;0.0139642!10828-111C9;0.843608!10788-110H5;0.52095!10792-110H9;0.45628!10765-110E9;0.348085!10829-111D1;0.235289!10830-111D2;0.040131!10831-111D3;0.956363!10832-111D4;0.135505!10833-111D5;0.269041!10764-110E8;0.245542!10770-110F5;0.418221!10399-106A3;0.234209!10400-106A4;0.164414!10405-106A9;0.234908!10834-111D6;0.325042!10835-111D7;0.108931!10836-111D8;0.00201557!10837-111D9;0.0351163!10699-109G6;0.00571737!10802-111A1;0.0356719!10796-110I4;0.0169379!10010-101C1;0.429927!10810-111A9;0.728673!10421-106C7;0.179279!10708-109H6;0.198054!12235-129G3;0.998641!12236-129G4;0.184768!12237-129G5;0.80154!10167-103B5;0.190513!10151-102I7;0.703878!10428-106D5;0.604161!10795-110I3;0.354133!10805-111A4;0.408403!10052-101G7;0.455273!10189-103D9;0.869386!10589-108D4;0.763692!10425-106D2;0.528182!10427-106D4;0.262685!10702-109G9;0.154086!10432-106D9;0.609795!10496-107C1;0.886137!10718-109I7;0.831097!10011-101C2;0.480015!10053-101G8;0.9778!10686-109F2;0.933021!10084-102B3;0.655349!10012-101C3;0.712066!10085-102B4;0.575167!10482-107A5;0.791513!10419-106C5;0.70462!10080-102A8;0.402519!10760-110E4;0.112863!10709-109H7;0.565518!10710-109H8;0.357297!10703-109H1;0.79235!10719-109I8;0.760042!10642-109A3;0.563583!10177-103C6;0.424219!10164-103B2;0.570187!10173-103C2;0.655097!10166-103B4;0.314062!10083-102B2;0.12949!10188-103D8;0.597567!10552-107I3;0.766738!10553-107I4;0.738651!10013-101C4;0.403111!10536-107G5;0.760384!10618-108G6;0.949569!10423-106C9;0.803571!10785-110H2;0.764594!12238-129G6;0.823616!12239-129G7;0.529857!12240-129G8;0.477657!10416-106C2;0.96979!10801-110I9;0.0291234!10766-110F1;0.308925!10824-111C5;0.0850956!10825-111C6;0.143795!10826-111C7;0.144332!10454-106G4;0.0840973!10409-106B4;0.126744!10638-108I8;0.00646399!10636-108I6;0.707555!10513-107D9;0.991772!10420-106C6;0.502391!10082-102B1;0.263947!10014-101C5;0.472932!10070-101I7;0.710081!10452-106G2;0.804621!10453-106G3;0.51137!10449-106F8;0.221355!10042-101F6;0.184582!10069-101I6;0.967868!10193-103E4;0.717842!10631-108I1;0.656273!10438-106E6;0.200495!10488-107B2;0.498031!10196-103E7;0.503638!10071-101I8;0.696305!10071-101I8;0.568598!10041-101F5;0.560526!10451-106G1;0.181514!10450-106F9;0.450059!10604-108F1;0.911725!10605-108F2;0.874664!10606-108F3;0.623182!10603-108E9;0.807916!10497-107C2;0.907642!10448-106F7;0.816152!10643-109A4;0.867464!10426-106D3;0.388772!10431-106D8;0.321215!10197-103E8;0.398656!10443-106F2;0.932744!10815-111B5;0.189571!10816-111B6;0.84435!10817-111B7;0.702013!10015-101C6;0.816046!10410-106B5;0.850134!10054-101G9;0.801288!10758-110E2;0.991439!10711-109H9;0.0451436!10040-101F4;0.462393!10470-106I2;0.581137!10415-106C1;0.439567!10198-103E9;0.915488!10614-108G2;0.933461!10612-108F9;0.503799!10549-107H9;0.43968!10615-108G3;0.0983178!10487-107B1;0.514006!10433-106E1;0.970855!10688-109F4;0.0744054!10444-106F3;0.51577!10444-106F3;0.292697!10485-107A8;0.343012!10413-106B8;0.580675!10175-103C4;0.995822!10161-103A8;0.510325!12131-128D7;0.631369!10624-108H3;0.896556!10712-109I1;0.572984!10205-103F7;0.148801!10206-103F8;0.750406!10207-103F9;0.488346!10050-101G5;0.876046!10051-101G6;0.634787!10016-101C7;0.652542!10046-101G1;0.471629!10778-110G4;0.473961!10633-108I3;0.767858!10818-111B8;0.54706!10819-111B9;0.876109!10820-111C1;0.838493!10484-107A7;0.999553!10808-111A7;0.601967!10169-103B7;0.00135012!10153-102I9;0.855582!13425-144D5;0.7294!13433-144E4;0.565126!13437-144E8;0.322126!11904-125F5;0.102648!11905-125F6;0.899013!10039-101F3;0.197144!10791-110H8;0.573207!10017-101C8;0.80896!10045-101F9;0.950738!10509-107D5;0.98611!10839-111E2;0.070703!10692-109F8;0.843577!10079-102A7;0.615277!10078-102A6;0.918163!10721-110A1;0.520678!10569-108B2;0.232582!10570-108B3;0.355108!10571-108B4;0.165045!10647-109A8;0.810372!10752-110D5;0.918572!10782-110G8;0.491916!10726-110A6;0.853298!10018-101C9;0.917389!10086-102B5;0.37239!10182-103D2;0.238904!10165-103B3;0.559431!10499-107C4;0.766371!10408-106B3;0.704166!10019-101D1;0.91866!10068-101I5;0.723341!10075-102A3;0.675095!10077-102A5;0.790383!10727-110A7;0.672736!10775-110G1;0.291878!10412-106B7;0.313544!12231-129F8;0.364563!12232-129F9;0.089634!12233-129G1;0.399264!12234-129G2;0.181853!10414-106B9;0.372594!10170-103B8;0.0439361!10183-103D3;0.343112!10150-102I6;0.436093!10174-103C3;0.468995!10155-103A2;0.962704!10038-101F2;0.626177!10838-111E1;0.992972!10759-110E3;0.770503!10514-107E1;0.0331676!10465-106H6;0.490134!10691-109F7;0.427219!10843-111E6;0.413251!10844-111E7;0.185299!11747-123G1;0.448048!11748-123G2;0.655701!11749-123G3;0.516742!11750-123G4;0.181122!11751-123G5;0.40932!11840-124H4;0.227743!11752-123G6;0.136096!11753-123G7;0.210476!11754-123G8;0.274992!11755-123G9;0.278918!11756-123H1;0.946879!11833-124G6;0.74623!11760-123H5;0.91958!11836-124G9;0.690186!11758-123H3;0.295455!11835-124G8;0.3666!11762-123H7;0.5367!11838-124H2;0.186026!11757-123H2;0.128805!11759-123H4;0.975811!11761-123H6;0.358625!11842-124H6;0.20944!11837-124H1;0.494056!10568-108B1;0.610589!13230-141I8;0.828592!13231-141I9;0.652539!10696-109G3;0.472948!10493-107B7;0.32643!10494-107B8;0.0774243!10850-111F4;0.807561!10851-111F5;0.711593!10852-111F6;0.561144!10853-111F7;0.276943!10854-111F8;0.0945064!10855-111F9;0.60586!10856-111G1;0.597463!10847-111F1;0.0917816!10846-111E9;0.25145!10848-111F2;0.310266!10845-111E8;0.102376!10857-111G2;0.983803!10858-111G3;0.37759!10156-103A3;0.0857782!11901-125F2;0.387348!11902-125F3;0.736692!11903-125F4;0.716764!10689-109F5;0.463467!10648-109A9;0.905438!10784-110H1;0.0781332!10744-110C6;0.852286!10772-110F7;0.337851!10474-106I6;0.687877!10600-108E6;0.471985!10684-109E9;0.803582!12226-129F3;0.482448!12227-129F4;0.14411!10508-107D4;0.16077!10539-107G8;0.841065!10607-108F4;0.919903!10555-107I6;0.763965!10774-110F9;0.431632!10637-108I7;0.329269!10663-109C6;0.272715!10728-110A8;0.886722!10729-110A9;0.76131!10430-106D7;0.432339!10730-110B1;0.0334989!10813-111B3;0.372924!10812-111B2;0.229937!10037-101F1;0.804126!10172-103C1;0.626264!10163-103B1;0.591994!10076-102A4;0.579829!10073-102A1;0.819194!10036-101E9;0.794751!10195-103E6;0.963761!10277-104E7;0.423354!10434-106E2;0.844821!10550-107I1;0.33833!10545-107H5;0.914409!10544-107H4;0.837992!10704-109H2;0.660731!10510-107D6;0.394758!10558-107I9;0.636585!10020-101D2;0.496676!10732-110B3;0.573346!10049-101G4;0.402407!10698-109G5;0.602816!10437-106E5;0.431506!10417-106C3;0.107981!10035-101E8;0.360376!10171-103B9;0.654816!10157-103A4;0.532112!10034-101E7;0.710198!10072-101I9;0.720115!10199-103F1;0.543328!10200-103F2;0.136536!10697-109G4;0.753848!10723-110A3;0.653827!10179-103C8;0.271519!10160-103A7;0.505445!10180-103C9;0.429814!10162-103A9;0.91574!10021-101D3;0.566987!10840-111E3;0.699642!10706-109H4;0.112833!10033-101E6;0.332307!10032-101E5;0.461154!10490-107B4;0.794126!10439-106E7;0.272251!10022-101D4;0.763285!10176-103C5;0.475343!10469-106I1;0.27646!10067-101I4;0.408142!10411-106B6;0.911063!10471-106I3;0.0404845!10030-101E3;0.121938!10475-106I7;0.647392!10787-110H4;0.436687!10477-106I9;0.064971!10695-109G2;0.0401058!11771-123I7;0.457756!11772-123I8;0.76317!11773-123I9;0.516753!10093-102C3;0.732592!10442-106F1;0.0938334!10442-106F1;0.149048!10201-103F3;0.156673!10639-108I9;0.946281!11843-124H7;0.855158!11841-124H5;0.235646!10693-109F9;0.919062!10436-106E4;0.89391!10483-107A6;0.900713!10282-104F3;0.873187!10023-101D5;0.896191!10066-101I3;0.780627!10065-101I2;0.643519!10800-110I8;0.637409!10610-108F7;0.61916!10841-111E4;0.492742!10541-107H1;0.729411!10842-111E5;0.281573!10562-108A4;0.656213!10024-101D6;0.96155!10064-101I1;0.870392!10609-108F6;0.44443!10048-101G3;0.766037!10781-110G7;0.681411!10181-103D1;0.625504!10159-103A6;0.909988!10056-101H2;0.900204!10737-110B8;0.79635!10025-101D7;0.282006!10044-101F8;0.169306!10424-106D1;0.457793!10463-106H4;0.128833!10616-108G4;0.180087!10486-107A9;0.524937!10062-101H8;0.914803!10202-103F4;0.82345!10158-103A5;0.612393!10441-106E9;0.82788!10031-101E4;0.258121!10063-101H9;0.970908!10063-101H9;0.529592!11763-123H8;0.624352!11765-123I1;0.242313!11768-123I4;0.0265293!10807-111A6;0.0678578!10790-110H7;0.377209!10798-110I6;0.50439!10786-110H3;0.327206!10591-108D6;0.360081!10593-108D8;0.242981!10590-108D5;0.398806!10026-101D8;0.0550755!10096-102C6;0.268606!10168-103B6;0.0235018!10154-103A1;0.74145!10209-103G2;0.489378!10061-101H7;0.59252!10027-101D9;0.691352!10043-101F7;0.321976!10783-110G9;0.461705!10028-101E1;0.163302!10060-101H6;0.349606!10203-103F5;0.658151!10059-101H5;0.819991!10047-101G2;0.862138!10029-101E2;0.596663!10058-101H4;0.391881!10418-106C4;0.643133!10492-107B6;0.722909!10694-109G1;0.821374!10797-110I5;0.235398!10057-101H3;0.827084!10100-102D1;0.98422!10055-101H1;0.980877!10204-103F6;0.924454!10191-103E2;0.677714!10563-108A5;0.802935
|name=CNhs11267_bl_f2
|name=CNhs11267_bl_f2
|tomtom_result=STB3#MA0390.1;7;0.000274043;0.130444;0.260889;12;ACTTTTCACAAA;GTCCAAAATTTTTCACTCTGG;+!SFP1#MA0378.1;9;0.00321173;1.52879;1;12;ACTTTTCACAAA;CCGTAGAAAATTTTTTTCAAT;-!Pax4#MA0068.1;3;0.00791143;3.76584;1;12;ACTTTTCACAAA;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!NHP6B#MA0346.1;0;0.0173949;8.27996;1;12;ACTTTTCACAAA;TTTATTTATATATAATATGA;+
}}
}}

Latest revision as of 14:57, 7 September 2012

Full Name: CNhs11267_bl_f2

Motif matrix
POACGT
1984.1892199821353561.268431236785750.65873301642627802.7179592107692
2654.3093865142866731.6553290850323281.46571181226096731.4039160345375
3588.9762628558211337.484183612896471.415569613393271400.958327364004
4282.65003462211761007.245640553091364.648512040630441044.290156230278
545.50674588883828840.04486887040131.6612476607291111511.6214810261506
629.1659744967957991.262860767968733.0840061332720212275.321502048082
7107.543817398551072248.8169001978020.2289108646654655442.24471498509854
82396.98837534343240.59500193411597620.41965475778574050.8313114107844015
9639.5437699473598887.5137966695477405.31902159012856466.45775523908117
101248.0526334545373578.3499753281455129.92306129408306442.5086733693516
111009.8964014715613440.4934688720367202.21129407757732746.233179024943
121210.8503848379996343.47866048584484339.6815582838414504.8237398384306

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

STB3#MA0390.170.0002740430.1304440.26088912ACTTTTCACAAAGTCCAAAATTTTTCACTCTGG+
SFP1#MA0378.190.003211731.52879112ACTTTTCACAAACCGTAGAAAATTTTTTTCAAT-
Pax4#MA0068.130.007911433.76584112ACTTTTCACAAAGAAAAATTTCCCATACTCCACTCCCCCCCC+
NHP6B#MA0346.100.01739498.27996112ACTTTTCACAAATTTATTTATATATAATATGA+