MacroAPE 1083:YTCKCTT,motif512: Difference between revisions
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(Created page with "{{Macroape_1083
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-124H6;0.230805!11837-124H1;0.143097!10568-108B1;0.0389365!13230-141I8;0.0576662!13231-141I9;0.0555132!10696-109G3;0.178601!10493-107B7;0.602069!10494-107B8;0.117026!10850-111F4;0.526098!10851-111F5;0.634745!10852-111F6;0.875112!10853-111F7;0.774798!10854-111F8;0.319323!10855-111F9;0.820441!10856-111G1;0.951061!10847-111F1;0.644576!10846-111E9;0.0874134!10848-111F2;0.895248!10845-111E8;0.583737!10857-111G2;0.144794!10858-111G3;0.787435!10156-103A3;0.166317!11901-125F2;0.199113!11902-125F3;0.46615!11903-125F4;0.813807!10689-109F5;0.816092!10648-109A9;0.810723!10784-110H1;0.957892!10744-110C6;0.119605!10772-110F7;0.243049!10474-106I6;0.402271!10600-108E6;0.869365!10684-109E9;0.614668!12226-129F3;0.481543!12227-129F4;0.590762!10508-107D4;0.0807469!10539-107G8;0.0728946!10607-108F4;0.0920815!10555-107I6;0.285888!10774-110F9;0.0924852!10637-108I7;0.0578532!10663-109C6;0.0476375!10728-110A8;0.157376!10729-110A9;0.0368525!10430-106D7;0.12338!10730-110B1;0.0248461!10813-111B3;0.154764!10812-111B2;0.460875!10037-101F1;0.01378!10172-103C1;0.154557!10163-103B1;0.184644!10076-102A4;0.138701!10073-102A1;0.256934!10036-101E9;0.118979!10195-103E6;0.195564!10277-104E7;0.204158!10434-106E2;0.840442!10550-107I1;0.42011!10545-107H5;0.132351!10544-107H4;0.454519!10704-109H2;0.182719!10510-107D6;0.275323!10558-107I9;0.00481424!10020-101D2;0.418284!10732-110B3;0.604062!10049-101G4;0.924431!10698-109G5;0.0741768!10437-106E5;0.0126783!10417-106C3;0.899064!10035-101E8;0.765535!10171-103B9;0.170184!10157-103A4;0.133633!10034-101E7;0.185853!10072-101I9;0.174754!10199-103F1;0.108088!10200-103F2;0.14023!10697-109G4;0.100297!10723-110A3;0.24067!10179-103C8;0.124287!10160-103A7;0.246966!10180-103C9;0.195394!10162-103A9;0.402469!10021-101D3;0.190104!10840-111E3;0.361465!10706-109H4;0.0941732!10033-101E6;0.205459!10032-101E5;0.22007!10490-107B4;0.1986!10439-106E7;0.253391!10022-101D4;0.0328053!10176-103C5;0.483533!10469-106I1;0.127928!10067-101I4;0.0103231!10411-106B6;0.653914!10471-106I3;0.776658!10030-101E3;0.750133!10475-106I7;0.77479!10787-110H4;0.0480762!10477-106I9;0.35067!10695-109G2;0.0272566!11771-123I7;0.856427!11772-123I8;0.306742!11773-123I9;0.904793!10093-102C3;0.459527!10442-106F1;0.267151!10442-106F1;0.198026!10201-103F3;0.177729!10639-108I9;0.367203!11843-124H7;0.20567!11841-124H5;0.819978!10693-109F9;0.849457!10436-106E4;0.930533!10483-107A6;0.405966!10282-104F3;0.956!10023-101D5;0.163861!10066-101I3;0.0948453!10065-101I2;0.119144!10800-110I8;0.166732!10610-108F7;0.0410461!10841-111E4;0.0553605!10541-107H1;0.046804!10842-111E5;0.0303189!10562-108A4;0.0145239!10024-101D6;0.0353445!10064-101I1;0.451317!10609-108F6;0.414865!10048-101G3;0.800507!10781-110G7;0.564703!10181-103D1;0.205918!10159-103A6;0.394103!10056-101H2;0.232545!10737-110B8;0.615685!10025-101D7;0.442865!10044-101F8;0.227199!10424-106D1;0.263789!10463-106H4;0.510492!10616-108G4;0.243006!10486-107A9;0.422339!10062-101H8;0.828743!10202-103F4;0.845993!10158-103A5;0.263492!10441-106E9;0.703854!10031-101E4;0.195372!10063-101H9;0.262585!10063-101H9;0.180706!11763-123H8;0.284643!11765-123I1;0.0913876!11768-123I4;0.0704438!10807-111A6;0.0576217!10790-110H7;0.0398376!10798-110I6;0.120224!10786-110H3;0.0122396!10591-108D6;0.126726!10593-108D8;0.026912!10590-108D5;0.00242571!10026-101D8;0.0680443!10096-102C6;0.486643!10168-103B6;0.0473643!10154-103A1;0.286498!10209-103G2;0.149493!10061-101H7;0.105359!10027-101D9;0.485906!10043-101F7;0.225277!10783-110G9;0.276324!10028-101E1;0.012784!10060-101H6;0.560393!10203-103F5;0.756455!10059-101H5;0.111702!10047-101G2;0.195653!10029-101E2;0.292545!10058-101H4;0.140026!10418-106C4;0.173956!10492-107B6;0.0471022!10694-109G1;0.146487!10797-110I5;0.500709!10057-101H3;0.872589!10100-102D1;0.20951!10055-101H1;0.315368!10204-103F6;0.470088!10191-103E2;0.849614!10563-108A5;0.0913971 | ||
|name=YTCKCTT,motif512,CNhs13797,T:2474.0(60.91%),B:36177.9(51.67%),P:1e-31 | |name=YTCKCTT,motif512,CNhs13797,T:2474.0(60.91%),B:36177.9(51.67%),P:1e-31 | ||
|tomtom_result=Trl#MA0205.1;3;0.00157362;0.749043;1;7;CTCTCTT;TTGCTCTCTC;+!IRF1#MA0050.1;3;0.00496932;2.36539;1;7;CTCTCTT;GGTTTCACTTTC;-!IRF2#MA0051.1;8;0.00875625;4.16797;1;7;CTCTCTT;GTTTTGCTTTCACTTTCC;-!Klf4#MA0039.1;2;0.0117496;5.59283;1;7;CTCTCTT;CCTTCCTTTA;-!SWI4#MA0401.1;1;0.0132306;6.29776;1;7;CTCTCTT;TTTCGCGT;-!AZF1#MA0277.1;1;0.0145683;6.93453;1;7;CTCTCTT;TTTCTTTTT;-!YAP6#MA0418.1;0;0.0174884;8.3245;1;7;CTCTCTT;GTCGCTTACGTAATCAGACC;-!MBP1#MA0329.1;0;0.0193594;9.21509;1;7;CTCTCTT;TACGCGT;- | |||
}} | }} |
Latest revision as of 14:58, 7 September 2012
Full Name: YTCKCTT,motif512,CNhs13797,T:2474.0(60.91%),B:36177.9(51.67%),P:1e-31
Motif matrix | ||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
Trl#MA0205.1 | 3 | 0.00157362 | 0.749043 | 1 | 7 | CTCTCTT | TTGCTCTCTC | + |
IRF1#MA0050.1 | 3 | 0.00496932 | 2.36539 | 1 | 7 | CTCTCTT | GGTTTCACTTTC | - |
IRF2#MA0051.1 | 8 | 0.00875625 | 4.16797 | 1 | 7 | CTCTCTT | GTTTTGCTTTCACTTTCC | - |
Klf4#MA0039.1 | 2 | 0.0117496 | 5.59283 | 1 | 7 | CTCTCTT | CCTTCCTTTA | - |
SWI4#MA0401.1 | 1 | 0.0132306 | 6.29776 | 1 | 7 | CTCTCTT | TTTCGCGT | - |
AZF1#MA0277.1 | 1 | 0.0145683 | 6.93453 | 1 | 7 | CTCTCTT | TTTCTTTTT | - |
YAP6#MA0418.1 | 0 | 0.0174884 | 8.3245 | 1 | 7 | CTCTCTT | GTCGCTTACGTAATCAGACC | - |
MBP1#MA0329.1 | 0 | 0.0193594 | 9.21509 | 1 | 7 | CTCTCTT | TACGCGT | - |