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MacroAPE 1083:CNhs12494 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;386.67305978245236;25.745315968881865;346.7175400312562;72.86408421740863!2;423.17646699789617;20.70065755492864;104.62071817658473;283.5021...")
 
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44712!10828-111C9;0.396607!10788-110H5;0.983721!10792-110H9;0.634518!10765-110E9;0.616903!10829-111D1;0.729123!10830-111D2;0.393985!10831-111D3;0.0425294!10832-111D4;0.357962!10833-111D5;0.555778!10764-110E8;0.527451!10770-110F5;0.560222!10399-106A3;0.249056!10400-106A4;0.961015!10405-106A9;0.96995!10834-111D6;0.973959!10835-111D7;0.671965!10836-111D8;0.368122!10837-111D9;0.580828!10699-109G6;0.334014!10802-111A1;0.840381!10796-110I4;0.931215!10010-101C1;0.928403!10810-111A9;0.832569!10421-106C7;0.332474!10708-109H6;0.0515085!12235-129G3;0.469447!12236-129G4;0.535765!12237-129G5;0.510149!10167-103B5;0.585966!10151-102I7;0.926288!10428-106D5;0.415096!10795-110I3;0.315786!10805-111A4;0.956925!10052-101G7;0.910275!10189-103D9;0.585498!10589-108D4;0.563564!10425-106D2;0.0783175!10427-106D4;0.721352!10702-109G9;0.470747!10432-106D9;0.669762!10496-107C1;0.0170825!10718-109I7;0.514891!10011-101C2;0.871379!10053-101G8;0.935299!10686-109F2;0.133815!10084-102B3;0.0338682!10012-101C3;0.475133!10085-102B4;0.417378!10482-107A5;0.67682!10419-106C5;0.88558!10080-102A8;0.997842!10760-110E4;0.728317!10709-109H7;0.81418!10710-109H8;0.139208!10703-109H1;0.959221!10719-109I8;0.294159!10642-109A3;0.591953!10177-103C6;0.469974!10164-103B2;0.466759!10173-103C2;0.715045!10166-103B4;0.705615!10083-102B2;0.894733!10188-103D8;0.823445!10552-107I3;0.590655!10553-107I4;0.530286!10013-101C4;0.257172!10536-107G5;0.216375!10618-108G6;0.0322803!10423-106C9;0.598543!10785-110H2;0.729056!12238-129G6;0.588512!12239-129G7;0.305012!12240-129G8;0.841922!10416-106C2;0.282529!10801-110I9;0.629948!10766-110F1;0.490472!10824-111C5;0.37158!10825-111C6;0.456201!10826-111C7;0.438988!10454-106G4;0.444337!10409-106B4;0.939799!10638-108I8;0.22387!10636-108I6;0.0784588!10513-107D9;0.0902387!10420-106C6;0.414137!10082-102B1;0.0442208!10014-101C5;0.42377!10070-101I7;0.574595!10452-106G2;0.261711!10453-106G3;0.812401!10449-106F8;0.750458!10042-101F6;0.688403!10069-101I6;0.0613255!10193-103E4;0.364057!10631-108I1;0.340916!10438-106E6;0.822574!10488-107B2;0.286364!10196-103E7;0.482725!10071-101I8;0.549456!10071-101I8;0.242205!10041-101F5;0.957056!10451-106G1;0.600192!10450-106F9;0.0581212!10604-108F1;0.0496129!10605-108F2;0.25124!10606-108F3;0.243111!10603-108E9;0.199148!10497-107C2;0.329474!10448-106F7;0.695896!10643-109A4;0.59868!10426-106D3;0.352171!10431-106D8;0.982754!10197-103E8;0.765629!10443-106F2;0.918459!10815-111B5;0.278975!10816-111B6;0.319726!10817-111B7;0.252873!10015-101C6;0.352001!10410-106B5;0.592997!10054-101G9;0.292984!10758-110E2;0.774051!10711-109H9;0.894305!10040-101F4;0.689058!10470-106I2;0.535037!10415-106C1;0.396592!10198-103E9;0.0842292!10614-108G2;0.474149!10612-108F9;0.772964!10549-107H9;0.586898!10615-108G3;0.0739424!10487-107B1;0.620369!10433-106E1;0.385405!10688-109F4;0.0748757!10444-106F3;0.293244!10444-106F3;0.966574!10485-107A8;0.906382!10413-106B8;0.889769!10175-103C4;0.361485!10161-103A8;0.258212!12131-128D7;0.175424!10624-108H3;0.138393!10712-109I1;0.465665!10205-103F7;0.260639!10206-103F8;0.826818!10207-103F9;0.697872!10050-101G5;0.573861!10051-101G6;0.551707!10016-101C7;0.543024!10046-101G1;0.377707!10778-110G4;0.976435!10633-108I3;0.725622!10818-111B8;0.784858!10819-111B9;0.802234!10820-111C1;0.813308!10484-107A7;0.798715!10808-111A7;0.105777!10169-103B7;0.931871!10153-102I9;0.457211!13425-144D5;0.315887!13433-144E4;0.817086!13437-144E8;0.687492!11904-125F5;0.858393!11905-125F6;0.832799!10039-101F3;0.58573!10791-110H8;0.647686!10017-101C8;0.717447!10045-101F9;0.802511!10509-107D5;0.381731!10839-111E2;0.297077!10692-109F8;0.474936!10079-102A7;0.568653!10078-102A6;0.97529!10721-110A1;0.51132!10569-108B2;0.559422!10570-108B3;0.495189!10571-108B4;0.396163!10647-109A8;0.851331!10752-110D5;0.111373!10782-110G8;0.204455!10726-110A6;0.865846!10018-101C9;0.899396!10086-102B5;0.825607!10182-103D2;0.363794!10165-103B3;0.15643!10499-107C4;0.285393!10408-106B3;0.391633!10019-101D1;0.317665!10068-101I5;0.550156!10075-102A3;0.18017!10077-102A5;0.254548!10727-110A7;0.405631!10775-110G1;0.297177!10412-106B7;0.569481!12231-129F8;0.53779!12232-129F9;0.398053!12233-129G1;0.659758!12234-129G2;0.475834!10414-106B9;0.817932!10170-103B8;0.321062!10183-103D3;0.852581!10150-102I6;0.631638!10174-103C3;0.537983!10155-103A2;0.151177!10038-101F2;0.204032!10838-111E1;0.21574!10759-110E3;0.923823!10514-107E1;0.352464!10465-106H6;0.00438425!10691-109F7;0.308482!10843-111E6;0.043303!10844-111E7;0.714921!11747-123G1;0.271056!11748-123G2;0.710518!11749-123G3;0.86131!11750-123G4;0.964263!11751-123G5;0.0699983!11840-124H4;0.255199!11752-123G6;0.375645!11753-123G7;0.0940287!11754-123G8;0.360078!11755-123G9;0.892604!11756-123H1;0.893723!11833-124G6;0.916192!11760-123H5;0.813406!11836-124G9;0.772907!11758-123H3;0.878164!11835-124G8;0.950042!11762-123H7;0.824901!11838-124H2;0.746292!11757-123H2;0.509431!11759-123H4;0.859655!11761-123H6;0.714455!11842-124H6;0.375476!11837-124H1;0.523979!10568-108B1;0.747669!13230-141I8;0.481817!13231-141I9;0.575466!10696-109G3;0.528863!10493-107B7;0.0559581!10494-107B8;0.746597!10850-111F4;0.788136!10851-111F5;0.909249!10852-111F6;0.223543!10853-111F7;0.774254!10854-111F8;0.700503!10855-111F9;0.422397!10856-111G1;0.852734!10847-111F1;0.468032!10846-111E9;0.351583!10848-111F2;0.761345!10845-111E8;0.502149!10857-111G2;0.320972!10858-111G3;0.450785!10156-103A3;0.907498!11901-125F2;0.503806!11902-125F3;0.48394!11903-125F4;0.705995!10689-109F5;0.778029!10648-109A9;0.932803!10784-110H1;0.376308!10744-110C6;0.127972!10772-110F7;0.327866!10474-106I6;0.82012!10600-108E6;0.311866!10684-109E9;0.0697942!12226-129F3;0.999143!12227-129F4;0.666624!10508-107D4;0.399972!10539-107G8;0.348844!10607-108F4;0.268225!10555-107I6;0.138019!10774-110F9;0.246958!10637-108I7;0.446883!10663-109C6;0.154856!10728-110A8;0.247934!10729-110A9;0.155171!10430-106D7;0.28923!10730-110B1;0.775962!10813-111B3;0.18628!10812-111B2;0.861656!10037-101F1;0.267603!10172-103C1;0.495224!10163-103B1;0.807836!10076-102A4;0.454774!10073-102A1;0.298753!10036-101E9;0.907993!10195-103E6;0.619958!10277-104E7;0.499087!10434-106E2;0.0559733!10550-107I1;0.963832!10545-107H5;0.69763!10544-107H4;0.29036!10704-109H2;0.869015!10510-107D6;0.996772!10558-107I9;0.0701264!10020-101D2;0.0515613!10732-110B3;0.877404!10049-101G4;0.916722!10698-109G5;0.65864!10437-106E5;0.519036!10417-106C3;0.340251!10035-101E8;0.433506!10171-103B9;0.495357!10157-103A4;0.462248!10034-101E7;0.554383!10072-101I9;0.563151!10199-103F1;0.933898!10200-103F2;0.105227!10697-109G4;0.907863!10723-110A3;0.859474!10179-103C8;0.854137!10160-103A7;0.919928!10180-103C9;0.837299!10162-103A9;0.190556!10021-101D3;0.178021!10840-111E3;0.66315!10706-109H4;0.456792!10033-101E6;0.684678!10032-101E5;0.148714!10490-107B4;0.591227!10439-106E7;0.453734!10022-101D4;0.0295568!10176-103C5;0.9441!10469-106I1;0.842559!10067-101I4;0.517014!10411-106B6;0.363062!10471-106I3;0.947541!10030-101E3;0.322506!10475-106I7;0.433897!10787-110H4;0.392355!10477-106I9;0.184913!10695-109G2;0.267959!11771-123I7;0.996321!11772-123I8;0.440315!11773-123I9;0.193361!10093-102C3;0.431693!10442-106F1;0.753768!10442-106F1;0.233234!10201-103F3;0.372358!10639-108I9;0.459559!11843-124H7;0.781366!11841-124H5;0.827975!10693-109F9;0.638269!10436-106E4;0.774456!10483-107A6;0.600672!10282-104F3;0.595194!10023-101D5;0.863094!10066-101I3;0.518893!10065-101I2;0.868534!10800-110I8;0.225323!10610-108F7;0.276781!10841-111E4;0.283763!10541-107H1;0.134185!10842-111E5;0.201814!10562-108A4;0.410695!10024-101D6;0.74099!10064-101I1;0.594666!10609-108F6;0.458464!10048-101G3;0.736526!10781-110G7;0.96316!10181-103D1;0.701573!10159-103A6;0.274209!10056-101H2;0.208582!10737-110B8;0.360356!10025-101D7;0.786603!10044-101F8;0.233106!10424-106D1;0.0359408!10463-106H4;0.974691!10616-108G4;0.435817!10486-107A9;0.938999!10062-101H8;0.487343!10202-103F4;0.140401!10158-103A5;0.429949!10441-106E9;0.0124774!10031-101E4;0.0321605!10063-101H9;0.637952!10063-101H9;0.889285!11763-123H8;0.192861!11765-123I1;0.950642!11768-123I4;0.662781!10807-111A6;0.883307!10790-110H7;0.758078!10798-110I6;0.478593!10786-110H3;0.133407!10591-108D6;0.950093!10593-108D8;0.634192!10590-108D5;0.436084!10026-101D8;0.919957!10096-102C6;0.477592!10168-103B6;0.156512!10154-103A1;0.552131!10209-103G2;0.133624!10061-101H7;0.70647!10027-101D9;0.522604!10043-101F7;0.134446!10783-110G9;0.0152419!10028-101E1;0.696009!10060-101H6;0.939288!10203-103F5;0.332514!10059-101H5;0.766537!10047-101G2;0.913297!10029-101E2;0.505367!10058-101H4;0.665291!10418-106C4;0.649255!10492-107B6;0.947936!10694-109G1;0.147368!10797-110I5;0.62272!10057-101H3;0.143992!10100-102D1;0.571634!10055-101H1;0.177128!10204-103F6;0.113887!10191-103E2;0.347442!10563-108A5;0.301832
|name=CNhs12494_bl_f0
|name=CNhs12494_bl_f0
|tomtom_result=HMG-I/Y#MA0045.1;0;0.000331225;0.157663;0.315246;12;AAGCAAAAGGAA;CAACAAATGGAAAAAC;+!Hltf#MA0109.1;-2;0.000896318;0.426648;0.426539;10;AAGCAAAAGGAA;ATATAAGGTT;-!AZF1#MA0277.1;-3;0.00311368;1.48211;0.767284;9;AAGCAAAAGGAA;AAAAAGAAA;+!SFP1#MA0378.1;2;0.0032247;1.53496;0.767284;12;AAGCAAAAGGAA;CCGTAGAAAATTTTTTTCAAT;-!SUM1#MA0398.1;-3;0.00496091;2.36139;0.832417;9;AAGCAAAAGGAA;AAAAATTTT;-!STB3#MA0390.1;5;0.00575478;2.73927;0.832417;12;AAGCAAAAGGAA;CCAGAGTGAAAAATTTTGGAC;-!Klf4#MA0039.1;0;0.00808777;3.84978;0.832417;10;AAGCAAAAGGAA;TAAAGGAAGG;+!hb#MA0049.1;2;0.00808777;3.84978;0.832417;8;AAGCAAAAGGAA;GCATAAAAAA;+!STAT1#MA0137.1;-2;0.00913983;4.35056;0.832417;10;AAGCAAAAGGAA;GGAAAACGAAACTG;+!id1#MA0120.1;4;0.0101518;4.83226;0.832417;8;AAGCAAAAGGAA;CGAAAAGGAAAA;-!AFT1#MA0269.1;8;0.0118075;5.62036;0.832417;12;AAGCAAAAGGAA;CCAATCGGGTGCAATATGTAA;-!SPT23#MA0388.1;-4;0.0119269;5.67718;0.832417;8;AAGCAAAAGGAA;GAAATCAA;+!PPARG::RXRA#MA0065.2;3;0.0122445;5.8284;0.832417;12;AAGCAAAAGGAA;GTAGGGCAAAGGTCA;+!FKH1#MA0296.1;8;0.0137938;6.56586;0.875226;12;AAGCAAAAGGAA;TGAATTGTAAACAAAGAGGA;+!NFATC2#MA0152.1;-1;0.015131;7.20234;0.900064;7;AAGCAAAAGGAA;TGGAAAA;-!tll#MA0459.1;-4;0.0168368;8.01431;0.924424;8;AAGCAAAAGGAA;AAAAGTCAAA;+!SFL1#MA0377.1;4;0.017483;8.32192;0.924424;12;AAGCAAAAGGAA;TAGAGAATAGAAGAAATAAAA;+
}}
}}

Latest revision as of 15:00, 7 September 2012

Full Name: CNhs12494_bl_f0

Motif matrix
POACGT
1386.6730597824523625.745315968881865346.717540031256272.86408421740863
2423.1764669978961720.70065755492864104.62071817658473283.5021572705896
3317.741788043762117.21314149445404469.1530787842205527.89199167756193
4314.78811489415875357.1511065609785134.145027652744625.915750892116982
5776.51353641279299.03527865898302523.3294264357861723.121758492436392
6615.575353597648733.380760701673516175.68855357715587.355332123520337
7732.65107740928520.7790212064892663.863124430853714.706776953370065
8780.77508352607069.86359059608731131.7079076072231669.653418270616658
911.2742323375686988.411727450747051504.21361716002474308.1004230516586
1063.118687008322986110.07590461165005406.88040453067293251.92500384935286
11342.2848018482212201.231343543613553.91883896691874234.56501564124557
12408.7963990002758751.24595428264973468.40941796596962303.54822875110375

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
HMG-I/Y#MA0045.100.0003312250.1576630.31524612AAGCAAAAGGAACAACAAATGGAAAAAC+
Hltf#MA0109.1-20.0008963180.4266480.42653910AAGCAAAAGGAAATATAAGGTT-
AZF1#MA0277.1-30.003113681.482110.7672849AAGCAAAAGGAAAAAAAGAAA+
SFP1#MA0378.120.00322471.534960.76728412AAGCAAAAGGAACCGTAGAAAATTTTTTTCAAT-
SUM1#MA0398.1-30.004960912.361390.8324179AAGCAAAAGGAAAAAAATTTT-
STB3#MA0390.150.005754782.739270.83241712AAGCAAAAGGAACCAGAGTGAAAAATTTTGGAC-
Klf4#MA0039.100.008087773.849780.83241710AAGCAAAAGGAATAAAGGAAGG+
hb#MA0049.120.008087773.849780.8324178AAGCAAAAGGAAGCATAAAAAA+
STAT1#MA0137.1-20.009139834.350560.83241710AAGCAAAAGGAAGGAAAACGAAACTG+
id1#MA0120.140.01015184.832260.8324178AAGCAAAAGGAACGAAAAGGAAAA-
AFT1#MA0269.180.01180755.620360.83241712AAGCAAAAGGAACCAATCGGGTGCAATATGTAA-
SPT23#MA0388.1-40.01192695.677180.8324178AAGCAAAAGGAAGAAATCAA+
PPARG::RXRA#MA0065.230.01224455.82840.83241712AAGCAAAAGGAAGTAGGGCAAAGGTCA+
FKH1#MA0296.180.01379386.565860.87522612AAGCAAAAGGAATGAATTGTAAACAAAGAGGA+
NFATC2#MA0152.1-10.0151317.202340.9000647AAGCAAAAGGAATGGAAAA-
tll#MA0459.1-40.01683688.014310.9244248AAGCAAAAGGAAAAAAGTCAAA+
SFL1#MA0377.140.0174838.321920.92442412AAGCAAAAGGAATAGAGAATAGAAGAAATAAAA+
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