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MacroAPE 1083:CNhs11729 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;54.83981887922805;323.19112124811863;173.58835656891145;59.63938475735895!2;313.82064217195807;179.28830484254186;70.38384488051234;47.76588...")
 
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7777!10455-106G5;0.739291!10534-107G3;0.018024!10429-106D6;0.0170701!10464-106H5;0.203126!10827-111C8;0.172399!10789-110H6;0.00472471!10828-111C9;0.0129712!10788-110H5;0.0492429!10792-110H9;0.013035!10765-110E9;0.0173166!10829-111D1;0.0063515!10830-111D2;0.0106245!10831-111D3;0.00519736!10832-111D4;0.00400548!10833-111D5;0.0103051!10764-110E8;0.00898137!10770-110F5;0.00417599!10399-106A3;0.00503319!10400-106A4;0.0111621!10405-106A9;0.0175349!10834-111D6;0.0126693!10835-111D7;0.00644458!10836-111D8;0.00121486!10837-111D9;0.0902412!10699-109G6;0.00194854!10802-111A1;0.0262545!10796-110I4;0.00132806!10010-101C1;0.566936!10810-111A9;0.853146!10421-106C7;0.989329!10708-109H6;0.0330218!12235-129G3;0.0572822!12236-129G4;0.163069!12237-129G5;0.130757!10167-103B5;0.159748!10151-102I7;0.506878!10428-106D5;0.597924!10795-110I3;0.283075!10805-111A4;0.154638!10052-101G7;0.7157!10189-103D9;0.365921!10589-108D4;0.324698!10425-106D2;0.996404!10427-106D4;0.808446!10702-109G9;0.0459217!10432-106D9;0.601933!10496-107C1;0.48154!10718-109I7;0.801585!10011-101C2;0.00688151!10053-101G8;0.913784!10686-109F2;0.240331!10084-102B3;0.0896924!10012-101C3;0.576193!10085-102B4;0.690437!10482-107A5;0.403127!10419-106C5;0.685285!10080-102A8;0.610128!10760-110E4;0.621514!10709-109H7;0.489843!10710-109H8;0.937051!10703-109H1;0.909785!10719-109I8;0.713689!10642-109A3;0.369004!10177-103C6;0.106105!10164-103B2;0.520423!10173-103C2;0.545665!10166-103B4;0.328405!10083-102B2;0.373726!10188-103D8;0.431637!10552-107I3;0.490202!10553-107I4;0.907057!10013-101C4;0.168952!10536-107G5;0.386615!10618-108G6;0.573847!10423-106C9;0.80838!10785-110H2;0.446387!12238-129G6;0.686722!12239-129G7;0.451226!12240-129G8;0.726359!10416-106C2;0.480737!10801-110I9;0.0337401!10766-110F1;0.00462824!10824-111C5;8.21345e-05!10825-111C6;0.116443!10826-111C7;0.130101!10454-106G4;0.126259!10409-106B4;0.281435!10638-108I8;0.000191623!10636-108I6;0.714887!10513-107D9;0.473649!10420-106C6;0.631996!10082-102B1;0.886105!10014-101C5;0.386046!10070-101I7;0.905846!10452-106G2;0.64883!10453-106G3;0.958373!10449-106F8;0.539545!10042-101F6;0.717611!10069-101I6;0.936873!10193-103E4;0.0714868!10631-108I1;0.615883!10438-106E6;0.0767106!10488-107B2;0.392638!10196-103E7;0.499474!10071-101I8;0.794703!10071-101I8;0.513316!10041-101F5;0.317571!10451-106G1;0.920647!10450-106F9;0.812907!10604-108F1;0.310395!10605-108F2;0.196277!10606-108F3;0.239204!10603-108E9;0.0632507!10497-107C2;0.165065!10448-106F7;0.774117!10643-109A4;0.341536!10426-106D3;0.869385!10431-106D8;0.779579!10197-103E8;0.90158!10443-106F2;0.68056!10815-111B5;0.013507!10816-111B6;0.370219!10817-111B7;0.473278!10015-101C6;0.381137!10410-106B5;0.988487!10054-101G9;0.48367!10758-110E2;0.279852!10711-109H9;0.0612228!10040-101F4;0.327387!10470-106I2;0.519773!10415-106C1;0.978151!10198-103E9;0.706456!10614-108G2;0.957171!10612-108F9;0.538207!10549-107H9;0.681209!10615-108G3;0.916228!10487-107B1;0.406584!10433-106E1;0.506486!10688-109F4;0.233463!10444-106F3;0.932031!10444-106F3;0.301906!10485-107A8;0.2987!10413-106B8;0.9757!10175-103C4;0.264614!10161-103A8;0.598758!12131-128D7;0.969812!10624-108H3;0.048808!10712-109I1;0.163127!10205-103F7;0.153241!10206-103F8;0.223734!10207-103F9;0.429911!10050-101G5;0.134504!10051-101G6;0.244301!10016-101C7;0.215676!10046-101G1;0.12606!10778-110G4;0.0856942!10633-108I3;0.94371!10818-111B8;0.857262!10819-111B9;0.271847!10820-111C1;0.261806!10484-107A7;0.264303!10808-111A7;0.814968!10169-103B7;0.0505987!10153-102I9;0.504375!13425-144D5;0.574293!13433-144E4;0.52021!13437-144E8;0.728165!11904-125F5;0.847832!11905-125F6;0.160154!10039-101F3;0.549088!10791-110H8;0.4668!10017-101C8;0.552296!10045-101F9;0.993276!10509-107D5;0.581223!10839-111E2;0.966074!10692-109F8;0.150015!10079-102A7;0.0252241!10078-102A6;0.835359!10721-110A1;0.214001!10569-108B2;0.774563!10570-108B3;0.362167!10571-108B4;0.504687!10647-109A8;0.432654!10752-110D5;0.183718!10782-110G8;0.00122679!10726-110A6;0.743653!10018-101C9;0.841884!10086-102B5;0.836526!10182-103D2;0.890792!10165-103B3;0.626949!10499-107C4;0.70162!10408-106B3;0.387577!10019-101D1;0.886217!10068-101I5;0.868033!10075-102A3;0.294477!10077-102A5;0.675284!10727-110A7;0.142558!10775-110G1;0.0088133!10412-106B7;0.0199758!12231-129F8;0.257182!12232-129F9;0.213689!12233-129G1;0.639505!12234-129G2;0.505405!10414-106B9;0.426083!10170-103B8;0.967543!10183-103D3;0.373465!10150-102I6;0.446039!10174-103C3;0.550213!10155-103A2;0.671551!10038-101F2;0.702743!10838-111E1;0.677238!10759-110E3;0.944296!10514-107E1;0.201043!10465-106H6;0.87523!10691-109F7;0.131791!10843-111E6;0.404537!10844-111E7;0.848304!11747-123G1;0.523745!11748-123G2;0.402858!11749-123G3;0.29809!11750-123G4;0.157792!11751-123G5;0.207064!11840-124H4;0.233273!11752-123G6;0.381728!11753-123G7;0.223211!11754-123G8;0.252355!11755-123G9;0.262121!11756-123H1;0.0938391!11833-124G6;0.0706828!11760-123H5;0.129123!11836-124G9;0.0679665!11758-123H3;0.17307!11835-124G8;0.356726!11762-123H7;0.250974!11838-124H2;0.793636!11757-123H2;0.354714!11759-123H4;0.205343!11761-123H6;0.248358!11842-124H6;0.152442!11837-124H1;0.0279469!10568-108B1;0.391883!13230-141I8;0.012648!13231-141I9;0.532774!10696-109G3;0.356358!10493-107B7;0.0577432!10494-107B8;0.824683!10850-111F4;0.898641!10851-111F5;0.832186!10852-111F6;0.53904!10853-111F7;0.517541!10854-111F8;0.606253!10855-111F9;0.790722!10856-111G1;0.696434!10847-111F1;0.740066!10846-111E9;0.433756!10848-111F2;0.695132!10845-111E8;0.852833!10857-111G2;0.272697!10858-111G3;0.914612!10156-103A3;0.485419!11901-125F2;0.587623!11902-125F3;0.00161884!11903-125F4;0.0115707!10689-109F5;0.00958844!10648-109A9;0.814167!10784-110H1;0.503625!10744-110C6;0.0266947!10772-110F7;0.0256865!10474-106I6;0.0247609!10600-108E6;0.0566511!10684-109E9;0.370389!12226-129F3;0.177292!12227-129F4;0.331928!10508-107D4;0.444025!10539-107G8;0.477257!10607-108F4;0.581416!10555-107I6;0.28346!10774-110F9;0.247336!10637-108I7;0.802962!10663-109C6;0.26319!10728-110A8;0.40073!10729-110A9;0.765209!10430-106D7;0.312489!10730-110B1;0.0398612!10813-111B3;0.902718!10812-111B2;0.226301!10037-101F1;0.713189!10172-103C1;0.462128!10163-103B1;0.445815!10076-102A4;0.600731!10073-102A1;0.565827!10036-101E9;0.314533!10195-103E6;0.539834!10277-104E7;0.674204!10434-106E2;0.985618!10550-107I1;0.849628!10545-107H5;0.687083!10544-107H4;0.990705!10704-109H2;0.476009!10510-107D6;0.101235!10558-107I9;0.0240783!10020-101D2;0.299476!10732-110B3;0.57187!10049-101G4;0.570495!10698-109G5;0.89063!10437-106E5;0.748535!10417-106C3;0.588535!10035-101E8;0.461727!10171-103B9;0.511685!10157-103A4;0.491239!10034-101E7;0.558886!10072-101I9;0.486604!10199-103F1;0.340597!10200-103F2;0.644017!10697-109G4;0.603547!10723-110A3;0.288053!10179-103C8;0.334332!10160-103A7;0.82809!10180-103C9;0.90719!10162-103A9;0.348059!10021-101D3;0.377481!10840-111E3;0.934911!10706-109H4;0.0258789!10033-101E6;0.398654!10032-101E5;0.540146!10490-107B4;0.533225!10439-106E7;0.646436!10022-101D4;0.463608!10176-103C5;0.547436!10469-106I1;0.478658!10067-101I4;0.960863!10411-106B6;0.147375!10471-106I3;0.0684771!10030-101E3;0.422815!10475-106I7;0.579058!10787-110H4;0.946958!10477-106I9;0.909815!10695-109G2;0.435819!11771-123I7;0.0892634!11772-123I8;0.0330991!11773-123I9;0.0150007!10093-102C3;0.00381437!10442-106F1;0.820364!10442-106F1;6.20897e-05!10201-103F3;1.14453e-06!10639-108I9;0.759559!11843-124H7;0.200102!11841-124H5;0.343586!10693-109F9;0.572241!10436-106E4;0.932612!10483-107A6;0.43382!10282-104F3;0.898738!10023-101D5;0.516946!10066-101I3;0.290541!10065-101I2;0.0760931!10800-110I8;0.0556804!10610-108F7;0.812456!10841-111E4;0.671146!10541-107H1;0.95331!10842-111E5;0.580379!10562-108A4;0.578231!10024-101D6;0.0637299!10064-101I1;0.72454!10609-108F6;0.907225!10048-101G3;0.465326!10781-110G7;0.713329!10181-103D1;0.21702!10159-103A6;0.799786!10056-101H2;0.9346!10737-110B8;0.541424!10025-101D7;0.468763!10044-101F8;0.0815959!10424-106D1;0.345077!10463-106H4;0.0549048!10616-108G4;0.426661!10486-107A9;0.398555!10062-101H8;0.873518!10202-103F4;0.0695461!10158-103A5;0.978614!10441-106E9;0.639705!10031-101E4;0.460078!10063-101H9;0.538802!10063-101H9;0.371761!11763-123H8;0.913013!11765-123I1;0.524893!11768-123I4;0.528548!10807-111A6;0.284994!10790-110H7;0.421499!10798-110I6;0.61072!10786-110H3;0.064729!10591-108D6;0.656572!10593-108D8;0.716553!10590-108D5;0.594678!10026-101D8;0.570468!10096-102C6;0.5505!10168-103B6;0.579069!10154-103A1;0.664871!10209-103G2;0.772649!10061-101H7;0.443612!10027-101D9;0.0782829!10043-101F7;0.163925!10783-110G9;0.475677!10028-101E1;0.0918804!10060-101H6;0.407199!10203-103F5;0.309639!10059-101H5;0.402171!10047-101G2;0.132058!10029-101E2;0.641435!10058-101H4;0.592593!10418-106C4;0.0533169!10492-107B6;0.507232!10694-109G1;0.472089!10797-110I5;0.0776329!10057-101H3;0.113856!10100-102D1;0.0437343!10055-101H1;0.228597!10204-103F6;0.295838!10191-103E2;0.353145!10563-108A5;0.287226
|name=CNhs11729_bl_f2
|name=CNhs11729_bl_f2
|tomtom_result=PEND#MA0127.1;-2;8.8548e-05;0.0421488;0.0842976;10;CAACTTCACATG;ACTTCTTATT;+!INO2#MA0321.1;-4;0.00174146;0.828933;0.552622;8;CAACTTCACATG;TTCACATGC;-!INO4#MA0322.1;-4;0.00174146;0.828933;0.552622;8;CAACTTCACATG;TTCACATGC;-!STAT1#MA0137.1;0;0.0053446;2.54403;1;12;CAACTTCACATG;CAGTTTCATTTTCC;-!Pou5f1#MA0142.1;-2;0.0104583;4.97815;1;10;CAACTTCACATG;CTTTGTTATGCAAAT;+!AZF1#MA0277.1;-3;0.0168714;8.03081;1;9;CAACTTCACATG;TTTCTTTTT;-!Klf4#MA0039.1;-2;0.0169052;8.04689;1;10;CAACTTCACATG;CCTTCCTTTA;-
}}
}}

Latest revision as of 15:02, 7 September 2012

Full Name: CNhs11729_bl_f2

Motif matrix
POACGT
154.83981887922805323.19112124811863173.5883565689114559.63938475735895
2313.82064217195807179.2883048425418670.3838448805123447.765889558605025
3166.59450438808577155.55082843380134163.55241262866895125.56093600306114
494.19838755304471303.350112199943963.9942570370172543209.71592466361133
51.31169133545066961.02096569518625781.290927696173128607.6350967268071
60.02.53768049633527642.9484057947885374605.7725951624933
76.283364360329877566.22522976512050.551704826688709938.19838250147834
8305.5070537892204439.8309670788353640.8285884851909557265.0920721003704
920.962660774395264268.162856612417171.48037846146224250.65278560534256
10310.9796846829833115.0414975998307328.14819855435845157.08930061644514
1165.8712802393865141.2154156499254343.38409291621881360.78789264808694
1253.717199872997355.40271065471013293.89714961195756208.2416213139525

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
PEND#MA0127.1-28.8548e-050.04214880.084297610CAACTTCACATGACTTCTTATT+
INO2#MA0321.1-40.001741460.8289330.5526228CAACTTCACATGTTCACATGC-
INO4#MA0322.1-40.001741460.8289330.5526228CAACTTCACATGTTCACATGC-
STAT1#MA0137.100.00534462.54403112CAACTTCACATGCAGTTTCATTTTCC-
Pou5f1#MA0142.1-20.01045834.97815110CAACTTCACATGCTTTGTTATGCAAAT+
AZF1#MA0277.1-30.01687148.0308119CAACTTCACATGTTTCTTTTT-
Klf4#MA0039.1-20.01690528.04689110CAACTTCACATGCCTTCCTTTA-
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