Personal tools

MCL coexpression mm9:3697: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=-0.077130982192077,-0.0337963047313596,-0.022843393428185,0.0296095068163767,-0.0183474748469123,0.187291585770855,0.146650783254324,-0.0595505227298703,-0.077130982192077,-0.077130982192077,-0.0542517400291857,-0.00597891463839283,-0.077130982192077,-0.064998489835404,-0.0355090126604264,0.0480017579563665,-0.077130982192077,0.000158155499935266,-0.0234471115933498,0.011830708051711,0.0355915088331278,0.104056990442103,0.143121284376726,0.079568746423332,0.168992214172598,0.0992679487353899,0.116536827756761,0.216986043552293,0.110637538913956,0.0634730519825853,0.305894848151786,-0.077130982192077,-0.00773433267845077,-0.077130982192077,-0.0403966749678632,-0.0548690025679185,-0.077130982192077,0.091235726706039,-0.077130982192077,-0.077130982192077,0.0354527790571307,0.0475461638355497,-0.0198390878929337,0.252877491345181,0.132803167331376,0.231012351259336,0.00653670596696766,-0.0485788961740253,0.0249056232999794,-0.0514107601418424,-0.000320456566901499,-0.077130982192077,0.00966538539240263,-0.077130982192077,-0.0351853327174207,0.0430521440388602,-0.0115485864237509,-0.016929230818561,-0.077130982192077,-0.077130982192077,-0.077130982192077,0.227274898682361,-0.077130982192077,0.015779243848215,-0.077130982192077,0.000575027705795002,-0.0391944023235813,-0.0300627861306428,-0.0379224839673807,-0.0279037052137264,-0.077130982192077,0.0610376271577322,-0.0241689592647798,-0.0436757889365216,-0.0384933303906375,-0.077130982192077,-0.077130982192077,-0.0597347474889277,-0.077130982192077,-0.0109369566557329,-0.0401328169564201,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.0359621103986242,-0.0397492515137666,-0.00637551142864291,-0.0523873371391875,-0.0567156540915839,-0.0271733539005714,-0.0402829534102683,0.61750995177987,0.824442583126538,1.02501395134879,0.662431177899428,0.273749321618521,0.253785269001076,0.198574206001774,0.160230974457935,0.164972914183235,-0.0580556349271582,0.0423877766360723,-0.077130982192077,-0.077130982192077,0.0473976856239917,0.00471312062222833,-0.077130982192077,0.260060225899041,0.0664950543823228,-0.0194608672485645,-0.000831529359449597,0.124127337328687,0.123483334090949,0.065499474048687,0.0335549424552539,0.0016379612235406,-0.0451528655707724,-0.0403576943355343,0.0146095572770253,-0.0365526475886048,-0.0482445520661186,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,0.107876071610976,0.1174878389422,0.100012089837674,0.137992340773524,-0.0189902438116845,-0.077130982192077,-0.0446761603351128,-0.0539299477531323,-0.077130982192077,-0.0498007400668984,-0.0553655521455737,0.0218052965487223,0.198348629255,0.360204574872963,-0.077130982192077,0.0289010140808991,0.0075907364996434,-0.077130982192077,0.113656477197373,-0.0580735858220458,-0.0422290613853468,-0.0392985811830484,-0.077130982192077,-0.0488712301355354,0.0343601062909501,0.0234720283774384,0.00894245163743858,-0.0416153455505439,0.0696732591976408,0.0195596492059662,0.0491396148851045,0.310065139877144,0.291596513077987,0.318192484342876,0.000295412552153426,-0.077130982192077,0.00936170834066233,-0.0463709587281908,-0.00308950066963698,-0.035593434180919,-0.0468646859074901,-0.0427266873928601,-0.0307603538971058,-0.055077044517203,-0.0551258296778754,-0.0658465363645912,-0.077130982192077,-0.077130982192077,-0.0589002819457391,-0.0495011733602662,-0.0345930292339349,0.0376408601806612,0.121350411965764,0.00228870375877213,0.0296362687722236,0.0456100128143556,0.190256285264478,0.0708493797975882,0.193426275260756,-0.020913203359676,0.117812300216721,0.0235984169873547,-0.0245953712718466,0.0948272925976586,0.0156969052014887,0.028938161796368,-0.00932426350324497,0.0532849968252775,0.124927746607784,0.032130112622768,0.127435718572411,0.0466693163393201,0.0133326755509031,0.00416184151886063,0.035212658953199,-0.0375994740946616,0.0146349020151705,0.82837329264244,0.226768724805215,0.245373366559482,0.313822679079087,0.560275247191602,0.732810617084285,0.993045072250425,0.734074432971771,0.207405678622246,0.960274787402451,0.406431412491555,0.653889363670342,0.744127321112777,0.651200921332703,1.08095550603196,0.402077941278371,-0.00706699995832376,0.0564352768366103,0.0173823004265706,-0.0121207286288395,-0.016092303488273,-0.0547112432197119,-0.0153070130047605,-0.0104179447474598,-0.077130982192077,-0.0481706765863583,-0.0557130451595218,0.0386353156851097,-0.0111232852296186,-0.00539581274003564,0.0559731640898753,0.219595397532813,0.637667438275496,0.49987964565818,-0.077130982192077,-0.0305977801020857,-0.0360791410408702,-0.0119525464187182,0.0192889876942157,0.00641369920527933,0.0410809498771089,-0.015090735997683,-0.0480126624801912,-0.0410467951208716,0.0379564742281167,0.117753836292375,-0.0289097188467667,-0.077130982192077,0.150419316591454,0.0347933165113114,0.00738384174721503,0.278689538876112,0.511493951472092,0.0335437306809148,0.342625698365029,0.816081152260352,0.824345189726369,0.665038757633862,0.103264330960654,0.432204947923046,0.37626601357596,0.470156826980354,0.676133554369488,0.791023983514422,-0.077130982192077,-0.0531628181426238,0.0184602885587732,0.0406132030217262,-0.0298629918167597,-0.00584974065428843,-0.077130982192077,-0.000176039439069034,0.0744126750927794,0.126463068671158,0.672661231387036,-0.077130982192077,-0.055462344599022,-0.0436880665224159,-0.0444812670455989,-0.0551291330042635,0.138269500737472,-0.077130982192077,-0.0172217402247566,0.139409063826985,0.0633670157712792,-0.0122831215838722,-0.058583097326339,0.0072352981918771,-0.0347673767099963,0.0243648834493078,0.036785392039227,-0.077130982192077,0.0284784652585755,0.107252802195057,0.173980054418121,0.15602575282902,0.197350622283693,0.245001210381828,0.171574449703259,0.0906712699490657,0.00378861713273089,0.354325189107571,-0.077130982192077,0.0774978021864133,0.0225995334059518,3.74246640404702e-05,0.0340119172979661,0.0243700008939145,-0.0144807708310119,0.0170651940731859,-0.0482596534527483,-0.077130982192077,-0.077130982192077,0.0335308952181607,0.201268221315186,0.0366755430110832,-0.059448311458247,-0.0294485564884112,-0.0508963988494511,-0.0442684461009423,-0.0372480364174478,-0.0365795462393878,-0.0664990706956477,-0.0632247316947183,-0.0636683617000588,-0.063832819141029,-0.0611292123559536,-0.0179649008602508,-0.077130982192077,-0.0426276257423268,-0.00973104434008563,-0.0515611631368662,0.454899669764835,0.093593249867514,-0.0254802427632019,0.342088936045283,-0.077130982192077,-0.077130982192077,-0.011564357643964,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,0.00370969255006353,-0.0285225035504635,0.0580945718370303,0.15103909541219,0.209319451532515,0.391456338195632,0.299075125873765,0.190099203169854,0.434595538458596,0.275596996882604,0.361724069613317,0.145971043090657,0.246054059192791,0.271420967299712,0.276233062220959,0.107728689367845,0.209816795657722,0.130771298707583,0.134750183436533,0.209618970308029,0.405436595766276,0.119672532776675,0.192901921871834,0.25319928541044,0.301547687946207,0.177847090773907,0.210537315355293,0.0937959146118446,0.293133958356896,0.130246430717905,0.169101894509558,0.195722647046235,0.22884742057228,0.275330554126601,0.194111372613962,-0.0184704626608864,0.0936980371831274,0.0263741564764042,-0.0302345747401962,-0.0482742113596096,-0.0167549049708187
|coexpression_dpi_cluster_scores_mean=-0.077130982192077,-0.0337963047313596,-0.022843393428185,0.0296095068163767,-0.0183474748469123,0.187291585770855,0.146650783254324,-0.0595505227298703,-0.077130982192077,-0.077130982192077,-0.0542517400291857,-0.00597891463839283,-0.077130982192077,-0.064998489835404,-0.0355090126604264,0.0480017579563665,-0.077130982192077,0.000158155499935266,-0.0234471115933498,0.011830708051711,0.0355915088331278,0.104056990442103,0.143121284376726,0.079568746423332,0.168992214172598,0.0992679487353899,0.116536827756761,0.216986043552293,0.110637538913956,0.0634730519825853,0.305894848151786,-0.077130982192077,-0.00773433267845077,-0.077130982192077,-0.0403966749678632,-0.0548690025679185,-0.077130982192077,0.091235726706039,-0.077130982192077,-0.077130982192077,0.0354527790571307,0.0475461638355497,-0.0198390878929337,0.252877491345181,0.132803167331376,0.231012351259336,0.00653670596696766,-0.0485788961740253,0.0249056232999794,-0.0514107601418424,-0.000320456566901499,-0.077130982192077,0.00966538539240263,-0.077130982192077,-0.0351853327174207,0.0430521440388602,-0.0115485864237509,-0.016929230818561,-0.077130982192077,-0.077130982192077,-0.077130982192077,0.227274898682361,-0.077130982192077,0.015779243848215,-0.077130982192077,0.000575027705795002,-0.0391944023235813,-0.0300627861306428,-0.0379224839673807,-0.0279037052137264,-0.077130982192077,0.0610376271577322,-0.0241689592647798,-0.0436757889365216,-0.0384933303906375,-0.077130982192077,-0.077130982192077,-0.0597347474889277,-0.077130982192077,-0.0109369566557329,-0.0401328169564201,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.0359621103986242,-0.0397492515137666,-0.00637551142864291,-0.0523873371391875,-0.0567156540915839,-0.0271733539005714,-0.0402829534102683,0.61750995177987,0.824442583126538,1.02501395134879,0.662431177899428,0.273749321618521,0.253785269001076,0.198574206001774,0.160230974457935,0.164972914183235,-0.0580556349271582,0.0423877766360723,-0.077130982192077,-0.077130982192077,0.0473976856239917,0.00471312062222833,-0.077130982192077,0.260060225899041,0.0664950543823228,-0.0194608672485645,-0.000831529359449597,0.124127337328687,0.123483334090949,0.065499474048687,0.0335549424552539,0.0016379612235406,-0.0451528655707724,-0.0403576943355343,0.0146095572770253,-0.0365526475886048,-0.0482445520661186,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,0.107876071610976,0.1174878389422,0.100012089837674,0.137992340773524,-0.0189902438116845,-0.077130982192077,-0.0446761603351128,-0.0539299477531323,-0.077130982192077,-0.0498007400668984,-0.0553655521455737,0.0218052965487223,0.198348629255,0.360204574872963,-0.077130982192077,0.0289010140808991,0.0075907364996434,-0.077130982192077,0.113656477197373,-0.0580735858220458,-0.0422290613853468,-0.0392985811830484,-0.077130982192077,-0.0488712301355354,0.0343601062909501,0.0234720283774384,0.00894245163743858,-0.0416153455505439,0.0696732591976408,0.0195596492059662,0.0491396148851045,0.310065139877144,0.291596513077987,0.318192484342876,0.000295412552153426,-0.077130982192077,0.00936170834066233,-0.0463709587281908,-0.00308950066963698,-0.035593434180919,-0.0468646859074901,-0.0427266873928601,-0.0307603538971058,-0.055077044517203,-0.0551258296778754,-0.0658465363645912,-0.077130982192077,-0.077130982192077,-0.0589002819457391,-0.0495011733602662,-0.0345930292339349,0.0376408601806612,0.121350411965764,0.00228870375877213,0.0296362687722236,0.0456100128143556,0.190256285264478,0.0708493797975882,0.193426275260756,-0.020913203359676,0.117812300216721,0.0235984169873547,-0.0245953712718466,0.0948272925976586,0.0156969052014887,0.028938161796368,-0.00932426350324497,0.0532849968252775,0.124927746607784,0.032130112622768,0.127435718572411,0.0466693163393201,0.0133326755509031,0.00416184151886063,0.035212658953199,-0.0375994740946616,0.0146349020151705,0.82837329264244,0.226768724805215,0.245373366559482,0.313822679079087,0.560275247191602,0.732810617084285,0.993045072250425,0.734074432971771,0.207405678622246,0.960274787402451,0.406431412491555,0.653889363670342,0.744127321112777,0.651200921332703,1.08095550603196,0.402077941278371,-0.00706699995832376,0.0564352768366103,0.0173823004265706,-0.0121207286288395,-0.016092303488273,-0.0547112432197119,-0.0153070130047605,-0.0104179447474598,-0.077130982192077,-0.0481706765863583,-0.0557130451595218,0.0386353156851097,-0.0111232852296186,-0.00539581274003564,0.0559731640898753,0.219595397532813,0.637667438275496,0.49987964565818,-0.077130982192077,-0.0305977801020857,-0.0360791410408702,-0.0119525464187182,0.0192889876942157,0.00641369920527933,0.0410809498771089,-0.015090735997683,-0.0480126624801912,-0.0410467951208716,0.0379564742281167,0.117753836292375,-0.0289097188467667,-0.077130982192077,0.150419316591454,0.0347933165113114,0.00738384174721503,0.278689538876112,0.511493951472092,0.0335437306809148,0.342625698365029,0.816081152260352,0.824345189726369,0.665038757633862,0.103264330960654,0.432204947923046,0.37626601357596,0.470156826980354,0.676133554369488,0.791023983514422,-0.077130982192077,-0.0531628181426238,0.0184602885587732,0.0406132030217262,-0.0298629918167597,-0.00584974065428843,-0.077130982192077,-0.000176039439069034,0.0744126750927794,0.126463068671158,0.672661231387036,-0.077130982192077,-0.055462344599022,-0.0436880665224159,-0.0444812670455989,-0.0551291330042635,0.138269500737472,-0.077130982192077,-0.0172217402247566,0.139409063826985,0.0633670157712792,-0.0122831215838722,-0.058583097326339,0.0072352981918771,-0.0347673767099963,0.0243648834493078,0.036785392039227,-0.077130982192077,0.0284784652585755,0.107252802195057,0.173980054418121,0.15602575282902,0.197350622283693,0.245001210381828,0.171574449703259,0.0906712699490657,0.00378861713273089,0.354325189107571,-0.077130982192077,0.0774978021864133,0.0225995334059518,3.74246640404702e-05,0.0340119172979661,0.0243700008939145,-0.0144807708310119,0.0170651940731859,-0.0482596534527483,-0.077130982192077,-0.077130982192077,0.0335308952181607,0.201268221315186,0.0366755430110832,-0.059448311458247,-0.0294485564884112,-0.0508963988494511,-0.0442684461009423,-0.0372480364174478,-0.0365795462393878,-0.0664990706956477,-0.0632247316947183,-0.0636683617000588,-0.063832819141029,-0.0611292123559536,-0.0179649008602508,-0.077130982192077,-0.0426276257423268,-0.00973104434008563,-0.0515611631368662,0.454899669764835,0.093593249867514,-0.0254802427632019,0.342088936045283,-0.077130982192077,-0.077130982192077,-0.011564357643964,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,-0.077130982192077,0.00370969255006353,-0.0285225035504635,0.0580945718370303,0.15103909541219,0.209319451532515,0.391456338195632,0.299075125873765,0.190099203169854,0.434595538458596,0.275596996882604,0.361724069613317,0.145971043090657,0.246054059192791,0.271420967299712,0.276233062220959,0.107728689367845,0.209816795657722,0.130771298707583,0.134750183436533,0.209618970308029,0.405436595766276,0.119672532776675,0.192901921871834,0.25319928541044,0.301547687946207,0.177847090773907,0.210537315355293,0.0937959146118446,0.293133958356896,0.130246430717905,0.169101894509558,0.195722647046235,0.22884742057228,0.275330554126601,0.194111372613962,-0.0184704626608864,0.0936980371831274,0.0263741564764042,-0.0302345747401962,-0.0482742113596096,-0.0167549049708187
|coexpression_dpi_cluster_scores_median=-0.081914003768173,-0.0194749104259057,0,0.0328517949630844,0,0.141196816905022,0.00926480709496576,-0.029172625381553,-0.081914003768173,-0.081914003768173,-0.080841216319384,0,-0.081914003768173,-0.081914003768173,-0.0246130342131061,0.0657470301879335,-0.081914003768173,0.0187807769140261,-0.0261098316197895,0,0.0354470656487682,0.0534847419782262,0.169383305879659,0.105784421257349,0.0820872769095104,0.0475897835076696,0.120389695202293,0.188038833195444,0.114005083124694,0.095067923292288,0.159405060846962,-0.081914003768173,0,-0.081914003768173,0,-0.081914003768173,-0.081914003768173,0.151839024235742,-0.081914003768173,-0.081914003768173,0,0,0,0.271996109642756,0.132098061977861,0.200874310100047,-0.081914003768173,-0.0638226847539028,0.00433410015379784,-0.0723182766573542,0,-0.081914003768173,0.0437510945573698,-0.081914003768173,-0.023641994384089,0.0307957465383477,0,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.081914003768173,0.222691458144987,-0.081914003768173,0,-0.081914003768173,0,-0.035669203202571,0,-0.0318534481339692,-0.00179711187300624,-0.081914003768173,0.0272090829228553,0,-0.0317312138848399,-0.00575036545414363,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.00469966487824616,-0.0438951802101105,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.0201606960779938,0,0.00498004100350968,-0.0752480076493896,-0.081914003768173,-0.0207846814807504,0,0.472123258697586,0.879965160057346,1.11043000568444,0.753648971461162,0.296453199929762,0.27296237677376,0.185762530384772,0.16834933486018,0.232151882621976,-0.081914003768173,0,-0.081914003768173,-0.081914003768173,0.00676181721424302,0,-0.081914003768173,0.351497080477752,0.0317572847550713,0,0,0.115432590314795,0,0.06097065795378,0.0493087145129798,0,-0.081914003768173,0,0,-0.0277439389976413,-0.0628196524301829,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.081914003768173,0.098801861608942,0.142449288893358,0,0.0641320739917573,-0.081914003768173,-0.081914003768173,-0.0521144772371654,-0.0798758394912238,-0.081914003768173,-0.0674882164325222,-0.081914003768173,-0.00107452469685906,0.17540391704926,0.245060439302742,-0.081914003768173,0.0185395615313696,0.0148156686539959,-0.081914003768173,0.114414017937594,-0.0533279092131263,-0.0295611225580776,-0.0430151068532532,-0.081914003768173,-0.0646996866384332,0.0456782451487217,0.0703892716151147,0.00415943006134263,0,0.0478571230654675,0,0,0.431315240295774,0.403612300097038,0.365507928466136,0.00104771907173518,-0.081914003768173,0,-0.0571988724163994,-0.00390540301622157,-0.081914003768173,0,-0.0462660584104072,-0.0583289855408339,-0.0157521907435509,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.0665895163126256,-0.0393760508100308,0,0.0199878516244733,0.00204998814952029,0.00878012566052083,0.0665119673385862,0.205488721231012,0.0724916001764395,0.163821307365819,0,0.137878928257383,0,-0.00311058738782743,0.0773548534010084,0,0,0,0.0461450257179734,0.127993717815825,0,0.148387507215387,0.0769870445726752,0.0294389011296462,0.0160184016927212,0.030429637377103,-0.0308844185158118,0.0247520635314913,0.827367191116025,0.140120694261329,0.170024829417347,0.245304004625497,0.524779191141915,0.683273297349568,1.03938449199454,0.799870588206629,0.217099728250443,0.996631858273621,0.57586464921739,0.556502218583272,0.594272060516157,0.64185688325593,1.11920949227879,0.384920129478906,-0.00828611697712028,0,0,-0.0138227744179125,0,-0.081914003768173,-0.0567429890270833,0,-0.081914003768173,0,-0.081914003768173,0.024170504007722,-0.0127326404262182,0,0,0.170212315078266,0.904637864552857,0.693831948711167,-0.081914003768173,0.00955013251189531,0,0,0,0,0.00281358878980478,0,0,-0.0412263815944418,0,0.0504165118879083,-0.081914003768173,-0.081914003768173,0.185642670189487,0.0503877063120642,-0.0163765034120215,0.313365393256089,0.733458457688196,0.0124804740972267,0.367401036308846,0.981114621547181,1.05474256819888,0.856899756222658,0.099030517884095,0.3679759157815,0.315863780258093,0.677039603791878,0.980361830614085,0.971685062797765,-0.081914003768173,-0.081914003768173,0.0528318955547673,0.00242523662836856,-0.0785769572450821,-0.0106327622303844,-0.081914003768173,0,0.0852093075420163,0.131735538974372,0.746342233379405,-0.081914003768173,-0.081914003768173,-0.0564799483962379,-0.0329394310484558,-0.0159084562047326,0.111087966368681,-0.081914003768173,0,0.1794791271334,0,0,-0.081914003768173,0,0,0.00276485565401915,0.0416365502662344,-0.081914003768173,0,0.124900650969093,0.188541859025986,0.182042208574286,0.171043877239334,0.263220282669603,0.179713889523518,0.102224435403656,0,0.392768357494358,-0.081914003768173,0.0605152268483434,0.0255616378091246,-0.00474559691205549,-0.0291585866067304,0,-0.0337219569118638,0.0185974124838788,-0.0386070106591798,-0.081914003768173,-0.081914003768173,0,0.206333480896505,0.0424616899933645,-0.081914003768173,-0.0103903652126743,-0.0707751927801804,-0.081914003768173,-0.081914003768173,-0.0401399189693473,-0.081914003768173,-0.040195252276097,-0.0415261422921185,-0.081914003768173,-0.0339086942598028,0,-0.081914003768173,-0.0459688734588073,-0.0145140659161816,-0.0727694856424256,0.429613780793869,0.108264928353718,0,0.396116639658391,-0.081914003768173,-0.081914003768173,0,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.081914003768173,-0.081914003768173,0,0,0.0765882508404223,0.145521967023108,0.182538445293278,0.371164962517141,0.395239177691648,0.179144217461457,0.402867225750869,0.272863820180558,0.222127607179818,0.112844202759631,0.22559413906188,0.251019621605046,0.261720019590499,0.0872587600980115,0.176050075432616,0.0766073954291401,0.067947112997277,0.1929809475283,0.403412051044806,0.0709519923534245,0.208953822423421,0.222883376558508,0.246325413087793,0.142597528261048,0.156561635446875,0.0195133170621279,0.237490420768569,0.111528479678835,0.120349503804372,0.201677520895557,0.265941361665412,0.268236040928547,0.211345336807687,0,0.00937708550937208,0.0057787651946638,-0.00878972045241558,0,0
|gostat_on_MCL_coexpression=
|gostat_on_MCL_coexpression=
}}
}}

Revision as of 13:33, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr9:109735649..109735671,+p4@Nme6
Mm9::chr9:109735677..109735715,+p3@Nme6
Mm9::chr9:109735731..109735740,+p6@Nme6


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:3697&oldid=2152983"