FFCP PHASE1:Mm9::chr8:109207033..109207054,+: Difference between revisions
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|id=chr8:109207033..109207054,+ | |id=chr8:109207033..109207054,+ | ||
|ontology_enrichment_celltype=CL:0000988!4.16e-08!32;CL:0002032!4.16e-08!32;CL:0000037!4.16e-08!32;CL:0000566!4.16e-08!32;CL:0000837!4.16e-08!32;CL:0000838!8.22e-08!12;CL:0000542!1.10e-07!13;CL:0000051!1.10e-07!13;CL:0000791!1.95e-07!9;CL:0000789!1.95e-07!9;CL:0002420!1.95e-07!9;CL:0002419!1.95e-07!9;CL:0000790!1.95e-07!9;CL:0002031!2.07e-07!25;CL:0000084!3.47e-07!11;CL:0000827!3.47e-07!11;CL:0002320!4.18e-07!46;CL:0000134!4.18e-07!46;CL:0000624!9.03e-07!8;CL:0000414!9.58e-07!11 | |ontology_enrichment_celltype=CL:0000988!4.16e-08!32;CL:0002032!4.16e-08!32;CL:0000037!4.16e-08!32;CL:0000566!4.16e-08!32;CL:0000837!4.16e-08!32;CL:0000838!8.22e-08!12;CL:0000542!1.10e-07!13;CL:0000051!1.10e-07!13;CL:0000791!1.95e-07!9;CL:0000789!1.95e-07!9;CL:0002420!1.95e-07!9;CL:0002419!1.95e-07!9;CL:0000790!1.95e-07!9;CL:0002031!2.07e-07!25;CL:0000084!3.47e-07!11;CL:0000827!3.47e-07!11;CL:0002320!4.18e-07!46;CL:0000134!4.18e-07!46;CL:0000624!9.03e-07!8;CL:0000414!9.58e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.33e-08,32;CL:0002032,2.33e-08,32;CL:0000037,2.33e-08,32;CL:0000837,2.33e-08,32;CL:0000838,7.20e-08,12;CL:0000542,9.61e-08,13;CL:0000051,9.61e-08,13;CL:0002031,1.15e-07,25;CL:0000791,1.72e-07,9;CL:0000789,1.72e-07,9;CL:0002420,1.72e-07,9;CL:0002419,1.72e-07,9;CL:0000790,1.72e-07,9;CL:0002320,2.56e-07,46;CL:0000134,2.56e-07,46;CL:0000084,3.07e-07,11;CL:0000827,3.07e-07,11;CL:0000624,8.08e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.25e-11!51;UBERON:0004177!8.25e-11!29;UBERON:0002530!2.37e-10!65;UBERON:0002405!3.11e-10!70;UBERON:0000926!4.20e-10!193;UBERON:0004120!4.20e-10!193;UBERON:0006603!4.20e-10!193;UBERON:0002368!8.06e-10!60;UBERON:0002390!1.17e-09!45;UBERON:0003061!1.17e-09!45;UBERON:0006562!4.54e-09!24;UBERON:0001557!4.54e-09!24;UBERON:0001042!4.54e-09!24;UBERON:0008814!4.54e-09!24;UBERON:0009145!4.54e-09!24;UBERON:0003104!4.60e-09!131;UBERON:0009142!4.60e-09!131;UBERON:0003408!5.35e-09!24;UBERON:0002370!7.48e-09!23;UBERON:0000974!7.48e-09!23;UBERON:0004807!7.48e-09!23;UBERON:0005058!7.48e-09!23;UBERON:0003351!7.48e-09!23;UBERON:0009113!7.48e-09!23;UBERON:0003295!7.48e-09!23;UBERON:0009722!7.48e-09!23;UBERON:0005562!7.48e-09!23;UBERON:0007690!7.48e-09!23;UBERON:0001048!1.28e-08!147;UBERON:0002193!1.29e-08!48;UBERON:0000949!1.43e-08!72;UBERON:0001041!1.23e-07!92;UBERON:0000077!1.79e-07!97;UBERON:0003081!2.61e-07!88;UBERON:0002384!4.18e-07!46 | |ontology_enrichment_uberon=UBERON:0005057!2.25e-11!51;UBERON:0004177!8.25e-11!29;UBERON:0002530!2.37e-10!65;UBERON:0002405!3.11e-10!70;UBERON:0000926!4.20e-10!193;UBERON:0004120!4.20e-10!193;UBERON:0006603!4.20e-10!193;UBERON:0002368!8.06e-10!60;UBERON:0002390!1.17e-09!45;UBERON:0003061!1.17e-09!45;UBERON:0006562!4.54e-09!24;UBERON:0001557!4.54e-09!24;UBERON:0001042!4.54e-09!24;UBERON:0008814!4.54e-09!24;UBERON:0009145!4.54e-09!24;UBERON:0003104!4.60e-09!131;UBERON:0009142!4.60e-09!131;UBERON:0003408!5.35e-09!24;UBERON:0002370!7.48e-09!23;UBERON:0000974!7.48e-09!23;UBERON:0004807!7.48e-09!23;UBERON:0005058!7.48e-09!23;UBERON:0003351!7.48e-09!23;UBERON:0009113!7.48e-09!23;UBERON:0003295!7.48e-09!23;UBERON:0009722!7.48e-09!23;UBERON:0005562!7.48e-09!23;UBERON:0007690!7.48e-09!23;UBERON:0001048!1.28e-08!147;UBERON:0002193!1.29e-08!48;UBERON:0000949!1.43e-08!72;UBERON:0001041!1.23e-07!92;UBERON:0000077!1.79e-07!97;UBERON:0003081!2.61e-07!88;UBERON:0002384!4.18e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.12e-11,29;UBERON:0005057,3.12e-11,29;UBERON:0002530,8.82e-11,65;UBERON:0000077,1.89e-10,35;UBERON:0002368,3.03e-10,60;UBERON:0002390,3.55e-10,45;UBERON:0003061,3.55e-10,45;UBERON:0006562,1.79e-09,24;UBERON:0001557,1.79e-09,24;UBERON:0001042,1.79e-09,24;UBERON:0008814,1.79e-09,24;UBERON:0009145,1.79e-09,24;UBERON:0003408,2.13e-09,24;UBERON:0002370,2.96e-09,23;UBERON:0000974,2.96e-09,23;UBERON:0004807,2.96e-09,23;UBERON:0005058,2.96e-09,23;UBERON:0003351,2.96e-09,23;UBERON:0009113,2.96e-09,23;UBERON:0003295,2.96e-09,23;UBERON:0009722,2.96e-09,23;UBERON:0005562,2.96e-09,23;UBERON:0007690,2.96e-09,23;UBERON:0002193,3.00e-09,48;UBERON:0002405,3.00e-09,48;UBERON:0000949,6.95e-09,72;UBERON:0001041,1.31e-08,80;UBERON:0001048,1.88e-08,134;UBERON:0002384,2.56e-07,46;UBERON:0003081,4.97e-07,87;UBERON:0000926,6.82e-07,120;UBERON:0004120,6.82e-07,120;UBERON:0006603,6.82e-07,120;UBERON:0000072,9.36e-07,27 | |||
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| ||
|short_description=p2@Tmco7 | |short_description=p2@Tmco7 | ||
}} | }} |
Revision as of 00:09, 14 November 2012
Short description: | p2@Tmco7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmco7_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 65bp_to_ENSMUST00000048359, NM_173037, uc009ngk.1, uc009ngl.1, uc012gjv.1_5end |
EntrezGene: | Tmco7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.33e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.33e-08 | 32 |
hematopoietic stem cell | 2.33e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.33e-08 | 32 |
lymphoid lineage restricted progenitor cell | 7.20e-08 | 12 |
lymphocyte | 9.61e-08 | 13 |
common lymphoid progenitor | 9.61e-08 | 13 |
hematopoietic lineage restricted progenitor cell | 1.15e-07 | 25 |
mature alpha-beta T cell | 1.72e-07 | 9 |
alpha-beta T cell | 1.72e-07 | 9 |
immature T cell | 1.72e-07 | 9 |
mature T cell | 1.72e-07 | 9 |
immature alpha-beta T cell | 1.72e-07 | 9 |
connective tissue cell | 2.56e-07 | 46 |
mesenchymal cell | 2.56e-07 | 46 |
T cell | 3.07e-07 | 11 |
pro-T cell | 3.07e-07 | 11 |
CD4-positive, alpha-beta T cell | 8.08e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.12e-11 | 29 |
immune organ | 3.12e-11 | 29 |
gland | 8.82e-11 | 65 |
mixed endoderm/mesoderm-derived structure | 1.89e-10 | 35 |
endocrine gland | 3.03e-10 | 60 |
hematopoietic system | 3.55e-10 | 45 |
blood island | 3.55e-10 | 45 |
pharynx | 1.79e-09 | 24 |
upper respiratory tract | 1.79e-09 | 24 |
chordate pharynx | 1.79e-09 | 24 |
pharyngeal arch system | 1.79e-09 | 24 |
pharyngeal region of foregut | 1.79e-09 | 24 |
gland of gut | 2.13e-09 | 24 |
thymus | 2.96e-09 | 23 |
neck | 2.96e-09 | 23 |
respiratory system epithelium | 2.96e-09 | 23 |
hemolymphoid system gland | 2.96e-09 | 23 |
pharyngeal epithelium | 2.96e-09 | 23 |
thymic region | 2.96e-09 | 23 |
pharyngeal gland | 2.96e-09 | 23 |
entire pharyngeal arch endoderm | 2.96e-09 | 23 |
thymus primordium | 2.96e-09 | 23 |
early pharyngeal endoderm | 2.96e-09 | 23 |
hemolymphoid system | 3.00e-09 | 48 |
immune system | 3.00e-09 | 48 |
endocrine system | 6.95e-09 | 72 |
foregut | 1.31e-08 | 80 |
primordium | 1.88e-08 | 134 |
connective tissue | 2.56e-07 | 46 |
lateral plate mesoderm | 4.97e-07 | 87 |
mesoderm | 6.82e-07 | 120 |
mesoderm-derived structure | 6.82e-07 | 120 |
presumptive mesoderm | 6.82e-07 | 120 |
segment of respiratory tract | 9.36e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.