FFCP PHASE1:Mm9::chr10:80858012..80858019,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:80858012..80858019,+ | |id=chr10:80858012..80858019,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.96e-16!9;CL:0002251!2.96e-16!9;CL:0000239!2.71e-14!6;CL:0000677!2.71e-14!6;CL:0000212!2.71e-14!6;CL:0000584!2.71e-14!6;CL:0000075!2.41e-12!7;CL:0002076!6.76e-10!15;CL:0000066!4.98e-09!25;CL:0000223!1.71e-07!20 | |ontology_enrichment_celltype=CL:0002563!2.96e-16!9;CL:0002251!2.96e-16!9;CL:0000239!2.71e-14!6;CL:0000677!2.71e-14!6;CL:0000212!2.71e-14!6;CL:0000584!2.71e-14!6;CL:0000075!2.41e-12!7;CL:0002076!6.76e-10!15;CL:0000066!4.98e-09!25;CL:0000223!1.71e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.66e-30,6;CL:0000677,6.66e-30,6;CL:0000584,6.66e-30,6;CL:0000075,7.57e-26,7;CL:0002563,1.98e-20,9;CL:0002251,1.98e-20,9;CL:0002076,8.25e-13,15;CL:0000223,6.23e-10,20;CL:0000066,3.41e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!2.54e-24!13;UBERON:0000060!2.54e-24!13;UBERON:0001262!2.54e-24!13;UBERON:0004786!2.54e-24!13;UBERON:0000344!4.38e-21!15;UBERON:0003350!2.96e-16!9;UBERON:0004808!2.96e-16!9;UBERON:0001277!2.96e-16!9;UBERON:0000485!2.26e-13!11;UBERON:0004923!3.62e-13!24;UBERON:0000331!1.86e-12!3;UBERON:0002116!1.86e-12!3;UBERON:0001204!1.86e-12!3;UBERON:0001168!1.86e-12!3;UBERON:0000160!8.47e-10!43;UBERON:0005409!4.80e-07!59 | |ontology_enrichment_uberon=UBERON:0001242!2.54e-24!13;UBERON:0000060!2.54e-24!13;UBERON:0001262!2.54e-24!13;UBERON:0004786!2.54e-24!13;UBERON:0000344!4.38e-21!15;UBERON:0003350!2.96e-16!9;UBERON:0004808!2.96e-16!9;UBERON:0001277!2.96e-16!9;UBERON:0000485!2.26e-13!11;UBERON:0004923!3.62e-13!24;UBERON:0000331!1.86e-12!3;UBERON:0002116!1.86e-12!3;UBERON:0001204!1.86e-12!3;UBERON:0001168!1.86e-12!3;UBERON:0000160!8.47e-10!43;UBERON:0005409!4.80e-07!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.98e-20,9;UBERON:0004808,1.98e-20,9;UBERON:0001277,1.98e-20,9;UBERON:0000485,5.67e-17,11;UBERON:0001242,1.42e-14,13;UBERON:0001262,1.42e-14,13;UBERON:0004786,1.42e-14,13;UBERON:0000344,8.25e-13,15;UBERON:0004923,1.75e-08,24;UBERON:0000160,7.72e-07,31 | |||
|phase1_expression=0,0,0,3.0246421130683,17.5313505481222,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,3.0246421130683,17.5313505481222,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:80858012..80858019,+ | |short_description=p@chr10:80858012..80858019,+ | ||
}} | }} |
Revision as of 02:29, 14 November 2012
Short description: | p@chr10:80858012..80858019, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:80858012..80858019, + |
Coexpression cluster: | MCL_coexpression_mm9:309 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.66e-30 | 6 |
gut absorptive cell | 6.66e-30 | 6 |
enterocyte | 6.66e-30 | 6 |
columnar/cuboidal epithelial cell | 7.57e-26 | 7 |
intestinal epithelial cell | 1.98e-20 | 9 |
epithelial cell of alimentary canal | 1.98e-20 | 9 |
endo-epithelial cell | 8.25e-13 | 15 |
endodermal cell | 6.23e-10 | 20 |
epithelial cell | 3.41e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.98e-20 | 9 |
gastrointestinal system epithelium | 1.98e-20 | 9 |
intestinal epithelium | 1.98e-20 | 9 |
simple columnar epithelium | 5.67e-17 | 11 |
intestinal mucosa | 1.42e-14 | 13 |
wall of intestine | 1.42e-14 | 13 |
gastrointestinal system mucosa | 1.42e-14 | 13 |
mucosa | 8.25e-13 | 15 |
organ component layer | 1.75e-08 | 24 |
intestine | 7.72e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.