FFCP PHASE1:Mm9::chr17:26412740..26412744,+: Difference between revisions
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|id=chr17:26412740..26412744,+ | |id=chr17:26412740..26412744,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.76e-08!23;CL:0000337!4.76e-08!23 | |ontology_enrichment_celltype=CL:0000117!4.76e-08!23;CL:0000337!4.76e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.70e-15,23;CL:0000337,1.70e-15,23;CL:0000540,1.99e-10,33;CL:0000047,1.99e-10,33;CL:0000031,1.99e-10,33;CL:0000404,1.99e-10,33;CL:0000393,1.25e-08,39;CL:0000211,1.25e-08,39;CL:0002319,1.04e-07,43;CL:0000221,1.66e-07,44;CL:0000133,1.66e-07,44;CL:0000120,2.19e-07,3;CL:0002614,2.72e-07,3;CL:0002613,3.37e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.54e-10!34;UBERON:0003080!1.06e-09!40;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0003056!1.18e-09!49;UBERON:0001049!6.23e-09!52;UBERON:0005068!6.23e-09!52;UBERON:0006241!6.23e-09!52;UBERON:0007135!6.23e-09!52;UBERON:0002791!1.05e-08!29;UBERON:0003528!1.05e-08!29;UBERON:0001893!1.05e-08!29;UBERON:0002616!1.30e-08!49;UBERON:0000153!1.73e-08!94;UBERON:0000033!3.18e-08!63;UBERON:0007811!4.14e-08!86;UBERON:0000955!4.49e-08!50;UBERON:0006238!4.49e-08!50;UBERON:0002346!1.67e-07!71;UBERON:0003075!1.67e-07!71;UBERON:0007284!1.67e-07!71;UBERON:0001017!2.61e-07!73;UBERON:0005743!2.61e-07!73;UBERON:0000073!2.86e-07!75;UBERON:0001016!2.86e-07!75 | |ontology_enrichment_uberon=UBERON:0002020!8.54e-10!34;UBERON:0003080!1.06e-09!40;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0003056!1.18e-09!49;UBERON:0001049!6.23e-09!52;UBERON:0005068!6.23e-09!52;UBERON:0006241!6.23e-09!52;UBERON:0007135!6.23e-09!52;UBERON:0002791!1.05e-08!29;UBERON:0003528!1.05e-08!29;UBERON:0001893!1.05e-08!29;UBERON:0002616!1.30e-08!49;UBERON:0000153!1.73e-08!94;UBERON:0000033!3.18e-08!63;UBERON:0007811!4.14e-08!86;UBERON:0000955!4.49e-08!50;UBERON:0006238!4.49e-08!50;UBERON:0002346!1.67e-07!71;UBERON:0003075!1.67e-07!71;UBERON:0007284!1.67e-07!71;UBERON:0001017!2.61e-07!73;UBERON:0005743!2.61e-07!73;UBERON:0000073!2.86e-07!75;UBERON:0001016!2.86e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.39e-10,34;UBERON:0002420,1.03e-09,8;UBERON:0007245,1.03e-09,8;UBERON:0010009,1.03e-09,8;UBERON:0010011,1.03e-09,8;UBERON:0000454,1.03e-09,8;UBERON:0003528,1.65e-09,29;UBERON:0002791,1.65e-09,29;UBERON:0001893,1.65e-09,29;UBERON:0002780,1.50e-08,39;UBERON:0001890,1.50e-08,39;UBERON:0006240,1.50e-08,39;UBERON:0003080,2.64e-08,40;UBERON:0001049,1.35e-07,52;UBERON:0005068,1.35e-07,52;UBERON:0006241,1.35e-07,52;UBERON:0007135,1.35e-07,52;UBERON:0001017,1.82e-07,73;UBERON:0002038,2.72e-07,3;UBERON:0009663,2.72e-07,3;UBERON:0009661,2.72e-07,3;UBERON:0000125,2.72e-07,3;UBERON:0002308,2.72e-07,3;UBERON:0000073,2.94e-07,54;UBERON:0001016,3.24e-07,75;UBERON:0002616,4.66e-07,46;UBERON:0000955,7.00e-07,47;UBERON:0006238,7.00e-07,47 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0.387369970324729,0.422366166455,0.234064526321993,0.513653904676515,0.319088635981346,0.513602189793617,0.34968160967599,0.333109761815663,0.202475267389826,0,0,0,0,0.255129870453209,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0.646413698057667,0,0.252030129759931,0.665191531965914,0.635030673459631,3.07532393792285,0,0,0.166234645358492,0.204169356262369,0,0,1.0470474879476,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0.782391344348039,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,0.202316460859598,2.64495489636016,1.26766280701236,0,0,0.449949858640699,0,0,0.299600110518405,0,1.03689612308478,2.16009501330705,0.420649922702764,0.571301968807607,0,0.367472397644862,0.958454710182364,0.919218786610021,0,0.638436690425939,0.768032666281217,0.791317726381163,2.19570344645783,1.04182674111352,0,2.25105044012672,1.06958773443767,0.883885756421003,1.28134512719193,0.559198337475902,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0.70667914902068,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0.247194967734374,0.144599356919912,0,0.647067399789637,0.441683036920787,0.969750506270444,0,0.292780797011547,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0.299581278809645,0.457500602818626,0.628271760564322,0,0,0.41557608911912,0.486723789203273,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.390361328888111,0,0.360124259610698,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0,0.219550115291051,0.268412837520744,0,0.514523061896422,0,0,0.639864751605702,0.696710015581316,0.128867461322093,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0,0,1.79763881730844,0,0,0,0,0,0.814605311381257,0.193952487167626,0.561086559122548,0.442655759869801,0.295220295959204,0.156998727841375,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0.482443521363367,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0,1.32878813789265,0.318909537314974,0.655453258862952,0.690739927463582,0.867894351489069,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0,0.780877488593277,0,0.238968797952552,0,0.566153061577665,0.404810701674894,0,0,0,0,0.534196811001766,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.643011105094777,0.354680467284547,0.356737635204141,0.329098041204242,0,0.23467170806371,0.63549621259146,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0,0,0.376736914009382,0.410082683163076,0.228778173206523,0.679913719975421,0.139951452323658,0.276399947608848,0.954670618015114,0.316335993581135,0,0.432021363287205,0,0.218362563746178,0.404593039154462,0.247960367176008,0.523511883968059,0,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0.724752362478018,0,0.316011120628178,1.01362607645082,0.410843828659309,0,0.537080087002444,0.198681354781265,0,0.147689527174577,0.100966449948148,0.304827226619999,0.403304740547362,0.292373642219257,0.192423683280659,0.350630706544707,0.226730383615211,0.443971906748129,0.538283139656854,0.167884616364078,0.19318959403219,0,0,0,0,2.82375921308533,0.920650473014354,1.14579102687879,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.735994600671987,1.02860775715625,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0.407412341537585,0,0,0.197008964751127,0.818462086339379,0,0,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0 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|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0.387369970324729,0.422366166455,0.234064526321993,0.513653904676515,0.319088635981346,0.513602189793617,0.34968160967599,0.333109761815663,0.202475267389826,0,0,0,0,0.255129870453209,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0.646413698057667,0,0.252030129759931,0.665191531965914,0.635030673459631,3.07532393792285,0,0,0.166234645358492,0.204169356262369,0,0,1.0470474879476,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0.782391344348039,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,0.202316460859598,2.64495489636016,1.26766280701236,0,0,0.449949858640699,0,0,0.299600110518405,0,1.03689612308478,2.16009501330705,0.420649922702764,0.571301968807607,0,0.367472397644862,0.958454710182364,0.919218786610021,0,0.638436690425939,0.768032666281217,0.791317726381163,2.19570344645783,1.04182674111352,0,2.25105044012672,1.06958773443767,0.883885756421003,1.28134512719193,0.559198337475902,0.37863096666592,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0.70667914902068,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0.247194967734374,0.144599356919912,0,0.647067399789637,0.441683036920787,0.969750506270444,0,0.292780797011547,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0.299581278809645,0.457500602818626,0.628271760564322,0,0,0.41557608911912,0.486723789203273,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.390361328888111,0,0.360124259610698,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0.162137619091711,0,0.219550115291051,0.268412837520744,0,0.514523061896422,0,0,0.639864751605702,0.696710015581316,0.128867461322093,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0,0,1.79763881730844,0,0,0,0,0,0.814605311381257,0.193952487167626,0.561086559122548,0.442655759869801,0.295220295959204,0.156998727841375,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0.482443521363367,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0,1.32878813789265,0.318909537314974,0.655453258862952,0.690739927463582,0.867894351489069,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0,0.780877488593277,0,0.238968797952552,0,0.566153061577665,0.404810701674894,0,0,0,0,0.534196811001766,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.643011105094777,0.354680467284547,0.356737635204141,0.329098041204242,0,0.23467170806371,0.63549621259146,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0,0,0.376736914009382,0.410082683163076,0.228778173206523,0.679913719975421,0.139951452323658,0.276399947608848,0.954670618015114,0.316335993581135,0,0.432021363287205,0,0.218362563746178,0.404593039154462,0.247960367176008,0.523511883968059,0,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0.724752362478018,0,0.316011120628178,1.01362607645082,0.410843828659309,0,0.537080087002444,0.198681354781265,0,0.147689527174577,0.100966449948148,0.304827226619999,0.403304740547362,0.292373642219257,0.192423683280659,0.350630706544707,0.226730383615211,0.443971906748129,0.538283139656854,0.167884616364078,0.19318959403219,0,0,0,0,2.82375921308533,0.920650473014354,1.14579102687879,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.735994600671987,1.02860775715625,0.177475806159338,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0.407412341537585,0,0,0.197008964751127,0.818462086339379,0,0,0,0.467863216890817,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr17:26412740..26412744,+ | |short_description=p@chr17:26412740..26412744,+ | ||
}} | }} |
Revision as of 07:14, 14 November 2012
Short description: | p@chr17:26412740..26412744, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:26412740..26412744, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.70e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.70e-15 | 23 |
neuron | 1.99e-10 | 33 |
neuronal stem cell | 1.99e-10 | 33 |
neuroblast | 1.99e-10 | 33 |
electrically signaling cell | 1.99e-10 | 33 |
electrically responsive cell | 1.25e-08 | 39 |
electrically active cell | 1.25e-08 | 39 |
neural cell | 1.04e-07 | 43 |
ectodermal cell | 1.66e-07 | 44 |
neurectodermal cell | 1.66e-07 | 44 |
granule cell | 2.19e-07 | 3 |
neuron of the substantia nigra | 2.72e-07 | 3 |
striatum neuron | 3.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 4.39e-10 | 34 |
basal ganglion | 1.03e-09 | 8 |
nuclear complex of neuraxis | 1.03e-09 | 8 |
aggregate regional part of brain | 1.03e-09 | 8 |
collection of basal ganglia | 1.03e-09 | 8 |
cerebral subcortex | 1.03e-09 | 8 |
brain grey matter | 1.65e-09 | 29 |
regional part of telencephalon | 1.65e-09 | 29 |
telencephalon | 1.65e-09 | 29 |
regional part of forebrain | 1.50e-08 | 39 |
forebrain | 1.50e-08 | 39 |
future forebrain | 1.50e-08 | 39 |
anterior neural tube | 2.64e-08 | 40 |
neural tube | 1.35e-07 | 52 |
neural rod | 1.35e-07 | 52 |
future spinal cord | 1.35e-07 | 52 |
neural keel | 1.35e-07 | 52 |
central nervous system | 1.82e-07 | 73 |
substantia nigra | 2.72e-07 | 3 |
telencephalic nucleus | 2.72e-07 | 3 |
midbrain nucleus | 2.72e-07 | 3 |
neural nucleus | 2.72e-07 | 3 |
nucleus of brain | 2.72e-07 | 3 |
regional part of nervous system | 2.94e-07 | 54 |
nervous system | 3.24e-07 | 75 |
regional part of brain | 4.66e-07 | 46 |
brain | 7.00e-07 | 47 |
future brain | 7.00e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.